Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc04g008700.3.1
CDS Infomation	Transcription elongation regulator 1 (AHRD V3.3 *** A0A1D1XFU2_9ARAE)
Sequence	ATGGCATCCCCAGCTTGGCTGCCCCAGGAAACACAGTCTTCAAGTTCACAGACATCAGTT ATGAGTTCAGCCACTGGAGAACCAACTACAAGCTCTTCAACTCCAAATGCAGATTCAACT CAGGAAGCTGCCCAAGGGAAATTTATCTCCCCTCCTGGATATAGTGTTTGTCGGGCTTCT TTCTCTTATATGAATGCTAATGTCCCTTCTGGAAGCTCTCAACAGTCATCTTCAAGTCCT GTCATTCCATCAACTTCCGCAGGTTCTTCAGCATCGCTCCAACCTCCTATTCCTGGCCAG TCTGCAAATGTTGGCTCTTCATTTTCATACAACATTTCACAAACTGATAACAATTTCTCC AGTGGCCTACAGTTCTCATCTAGCACCTTGAGGCCTGCTGCTCCTGATCATTCTGTGGAT ATAAATGCATCTCCTGCAGCATCATTACAGCCTCCTCTTCCTCTGGTGTCCACAAGGTTG AGCTCATTCATGCCTGGAACTGCAGCATCTGCAGGCCCCTTGATTAGTGGTTCAAACTTA TCTTTCAATGGAGGTCCTCAGATGATGCAGACAGATCAAACAATGAAACCTAATAGAAGG GTAGACCTTGCACAGGAAACAGGAGGAATGACTTCTGCAACTCTTGTTATGCATTCTGTT TCACAGGCCGTTCATATGAGTTCTGGTTCTTCGACAGCTGCATTTCCAACTTCTCATATG GGCTCTCCAAATATAATTAGAATGCCCCACGCACCTCAATTTCAGGTTCCAGCAGGAGTT CCTAGAAGTCCTGTTACTCCTGGTCCTCCTGGTCTTGGTCCAGCTATACCTTCATCTTCC AATCTTACTGCTACAGTTTCACCCGGAGGTCCTTCTTTACCCTTAAGACCCAATGCTCCT CCTGTTCATGTTCTGGCCAATCCATCTGTTCAACAACAAACATATTCTCCTTATCATTCT CCAGCTCCTATTGCTCCATCTCACCAGGGACCTTGGTTGCAGCCTCCACCAGTCACTACC ATGCTAAGACCACCATTTCCATCATATCCTGCAGGTTTTGCTGTTCCCTATCCTTTGTCA GCTACTGGTGCACCTCTCTCTTCAGTGACATTGCCTGATACTAGACCTCCTGGTGTAGCC CCAGTGGCAGCTCCACCTGGAGTGCCGACTACTGCTAGCCAGTCAACCCATGCTTCAGGG TTGCAGCCAGAGTTACCTCCTGGAGTTGACAGCGGTAAGCATGTAAATGATGCTGACACA AAACAAGGAGCTTCAACTAGTGAACAACTAGAGACCTGGACTGCTCACCGGACTGAAACT GGAGCCATATACTACTATAATTCTTTGACAGGAGAATCTACTTATGAGAAACCTGCTGGC TTCAGGGGAGAGCCTGGCAAAGTAGCTGCACAGCCTACTCCTGTTTCATGGGAAAGGTTG GCTGGTACAGATTGGGCATTAGTTGCTACTAATGATGGACAAAAATATTACTATAACACA AAAACAAAGTTAAGCAGCTGGCAAATTCCTATTGAGGTGACAGAGTTGAAAAAGAAGCAT GATGCTGATGCTTTGCAGGCTCAATCCCCATCAATATTGAATGTTAATGAGTCTGCTGAA AAAGGATCTGCTCCTATTAGTTTAAGCATACCTGCTGTTAGTACTGGTGGTCGTGATGCG ACATCTCTAAGACCTTCATTAGTTCCAGGATCTTCTGCACTGGATCTTGTAAAAAAGAAG TTGATGGATTTTGGTACTCCACTTGCTGTTTCTTCACCAGCCCCAGCCTCGTCAGGAGTA ATATCATCTGAAGTAAATGGATCAAAAGCACTTGAATCTACAACCAGAATTCCACAAAAA GAAAATAGCAAAGAGAAGTCAAAAGAAGCTAATGACAATGGCAATTTGTCTGAGTCCTCT TCAGATTCAGAGGATGATGAGAGTGTACCAACCAAAGAGGACTGTATCATCCAATTCAAG GAGATGCTGAAGGAACGTGGAGTAGCACCATTCTCAAAGTGGGAGAAGGAATTACCAAAG ATAGTGTTTGATCCACGCTTTAAGGCTATTCCAAGTTACAGTGCTAGAAAAACTCTGTTT GAGCATTATGTCAAGACACGTGCAGATGAAGAAAGAAAGGAGAAGCGTGCAGCACAGAAG GCTGCAGTTGAGGGCTTCAAGCAATTACTGGAAGAAGCAAAGGAGGATATCAGCGAGGAT ACGGATTATCAATCATTCAAAAAGAAATGGAGTCATGATCCACGCTTCGAGTCCTTAGAT CGAAAGGAGAGGGAAGTGCTTCTGAATGAGAGGGTTCTTCAGCTTAGGAAAGCAGCTCAA GAAAAAGCTCATGCTGTACGTGCTGCTGTTATATCTCAGTTCAAGTCCATGCTTCGAGAA CAAGGAGATATTACTTTAAATACACGGTGGTCAAAGGTGAAGGATAGCTTAAGAAGTGAT CCTCGTTATAAGTCTGTTAAGCATGAAGACAGAGAGACTTTATTCAATGAGTATCTATCG GAACTGAAGGCTGCTGAACAGGAAGTTGCACGAATTGCAAAAGCAAAACACGATGAAGAG GATAAATTGAAGGAAAGAGAACGTGCTTTGCGAAAACGTAAAGAAAGAGAAGAACAAGAA GTGGAGAGGGTGCGGTCGAAAGCTCGTAGAAAAGAAGCTGTTGAATCTTATCAAGCCTTG CTGGTTGAAATAATTAAGGATCCTCAGGCTTCTTGGACAGAGTCAAAACCTAAATTAGAG AAGGATCCCCAAGGACGTGCAGCTAATCCTCATTTGGATCAGTCTGACTTGGAAAAGCTT TTCCGGGAACATGTGAAGGTGTTGTATGAGCGGTGTGTACAAGAGTTCAAAGTTTTGTTA GCCGAGGTCATAACTGTTGAAGCTTGTTCACGAGAGACAGAAGATGGTAAAACAGTTGCA AATTCTTGGTCAACAGCGAAACAAGTACTCAAAGGTGATCTCAGGTATTCAAAAATGGCA AGAAAAGATAGTGAAACCTTATGGCGCAGATATGTTGAGGATATTCATCGGAGGCAAAAG TCAACACTCGATGAAGCAGACAAGGCAAGAAGTAAAGGATCTTCTGATTCAAGGAGAAGG TGA

Peptide Sequence

PEP ID	Solyc04g008700.3.1
PEP Infomation	Transcription elongation regulator 1 (AHRD V3.3 *** A0A1D1XFU2_9ARAE)
Sequence	MASPAWLPQETQSSSSQTSVMSSATGEPTTSSSTPNADSTQEAAQGKFISPPGYSVCRAS FSYMNANVPSGSSQQSSSSPVIPSTSAGSSASLQPPIPGQSANVGSSFSYNISQTDNNFS SGLQFSSSTLRPAAPDHSVDINASPAASLQPPLPLVSTRLSSFMPGTAASAGPLISGSNL SFNGGPQMMQTDQTMKPNRRVDLAQETGGMTSATLVMHSVSQAVHMSSGSSTAAFPTSHM GSPNIIRMPHAPQFQVPAGVPRSPVTPGPPGLGPAIPSSSNLTATVSPGGPSLPLRPNAP PVHVLANPSVQQQTYSPYHSPAPIAPSHQGPWLQPPPVTTMLRPPFPSYPAGFAVPYPLS ATGAPLSSVTLPDTRPPGVAPVAAPPGVPTTASQSTHASGLQPELPPGVDSGKHVNDADT KQGASTSEQLETWTAHRTETGAIYYYNSLTGESTYEKPAGFRGEPGKVAAQPTPVSWERL AGTDWALVATNDGQKYYYNTKTKLSSWQIPIEVTELKKKHDADALQAQSPSILNVNESAE KGSAPISLSIPAVSTGGRDATSLRPSLVPGSSALDLVKKKLMDFGTPLAVSSPAPASSGV ISSEVNGSKALESTTRIPQKENSKEKSKEANDNGNLSESSSDSEDDESVPTKEDCIIQFK EMLKERGVAPFSKWEKELPKIVFDPRFKAIPSYSARKTLFEHYVKTRADEERKEKRAAQK AAVEGFKQLLEEAKEDISEDTDYQSFKKKWSHDPRFESLDRKEREVLLNERVLQLRKAAQ EKAHAVRAAVISQFKSMLREQGDITLNTRWSKVKDSLRSDPRYKSVKHEDRETLFNEYLS ELKAAEQEVARIAKAKHDEEDKLKERERALRKRKEREEQEVERVRSKARRKEAVESYQAL LVEIIKDPQASWTESKPKLEKDPQGRAANPHLDQSDLEKLFREHVKVLYERCVQEFKVLL AEVITVEACSRETEDGKTVANSWSTAKQVLKGDLRYSKMARKDSETLWRRYVEDIHRRQK STLDEADKARSKGSSDSRRR*

Transcript Sequence

Transcript ID	Solyc04g008700.3.1
Transcript Infomation	Transcription elongation regulator 1 (AHRD V3.3 *** A0A1D1XFU2_9ARAE)
Sequence	AATAATGCTACTTATGCACAATCAAATTAAATGACGTAGATATCGATTGAAATCAAACTA TTAAAACATACCATAATTTAAGTATCTAAATAAAATTTATCGACTATTAAGTATCTAAAT AAAATTTATCGACAATTTCGACCTAATTGTTTTTTTAATAAGTGTATATTCATGGTGCTT GGTTAAATGGTTCTTTGCCCCAATTCTTCTGCAAAAAGCCCTGATCCTTCACATTGCGTC TCCTCACTCGCTCAGCGGGCACTGCGCTGCCGTATCTCTGCTCCGTCAATTCAACCAATC GCTCAGTTCCTATCACTCTCCGTGTTCACAGGTCAACCAAATAGATGAAAGCAAAATAAT TATCTCAAAGAAGCAGTACTAGAGGATCACTGTTTTTATTTCTTCAAGTAATTGAAGCAG TGAAATGGCATCCCCAGCTTGGCTGCCCCAGGAAACACAGTCTTCAAGTTCACAGACATC AGTTATGAGTTCAGCCACTGGAGAACCAACTACAAGCTCTTCAACTCCAAATGCAGATTC AACTCAGGAAGCTGCCCAAGGGAAATTTATCTCCCCTCCTGGATATAGTGTTTGTCGGGC TTCTTTCTCTTATATGAATGCTAATGTCCCTTCTGGAAGCTCTCAACAGTCATCTTCAAG TCCTGTCATTCCATCAACTTCCGCAGGTTCTTCAGCATCGCTCCAACCTCCTATTCCTGG CCAGTCTGCAAATGTTGGCTCTTCATTTTCATACAACATTTCACAAACTGATAACAATTT CTCCAGTGGCCTACAGTTCTCATCTAGCACCTTGAGGCCTGCTGCTCCTGATCATTCTGT GGATATAAATGCATCTCCTGCAGCATCATTACAGCCTCCTCTTCCTCTGGTGTCCACAAG GTTGAGCTCATTCATGCCTGGAACTGCAGCATCTGCAGGCCCCTTGATTAGTGGTTCAAA CTTATCTTTCAATGGAGGTCCTCAGATGATGCAGACAGATCAAACAATGAAACCTAATAG AAGGGTAGACCTTGCACAGGAAACAGGAGGAATGACTTCTGCAACTCTTGTTATGCATTC TGTTTCACAGGCCGTTCATATGAGTTCTGGTTCTTCGACAGCTGCATTTCCAACTTCTCA TATGGGCTCTCCAAATATAATTAGAATGCCCCACGCACCTCAATTTCAGGTTCCAGCAGG AGTTCCTAGAAGTCCTGTTACTCCTGGTCCTCCTGGTCTTGGTCCAGCTATACCTTCATC TTCCAATCTTACTGCTACAGTTTCACCCGGAGGTCCTTCTTTACCCTTAAGACCCAATGC TCCTCCTGTTCATGTTCTGGCCAATCCATCTGTTCAACAACAAACATATTCTCCTTATCA TTCTCCAGCTCCTATTGCTCCATCTCACCAGGGACCTTGGTTGCAGCCTCCACCAGTCAC TACCATGCTAAGACCACCATTTCCATCATATCCTGCAGGTTTTGCTGTTCCCTATCCTTT GTCAGCTACTGGTGCACCTCTCTCTTCAGTGACATTGCCTGATACTAGACCTCCTGGTGT AGCCCCAGTGGCAGCTCCACCTGGAGTGCCGACTACTGCTAGCCAGTCAACCCATGCTTC AGGGTTGCAGCCAGAGTTACCTCCTGGAGTTGACAGCGGTAAGCATGTAAATGATGCTGA CACAAAACAAGGAGCTTCAACTAGTGAACAACTAGAGACCTGGACTGCTCACCGGACTGA AACTGGAGCCATATACTACTATAATTCTTTGACAGGAGAATCTACTTATGAGAAACCTGC TGGCTTCAGGGGAGAGCCTGGCAAAGTAGCTGCACAGCCTACTCCTGTTTCATGGGAAAG GTTGGCTGGTACAGATTGGGCATTAGTTGCTACTAATGATGGACAAAAATATTACTATAA CACAAAAACAAAGTTAAGCAGCTGGCAAATTCCTATTGAGGTGACAGAGTTGAAAAAGAA GCATGATGCTGATGCTTTGCAGGCTCAATCCCCATCAATATTGAATGTTAATGAGTCTGC TGAAAAAGGATCTGCTCCTATTAGTTTAAGCATACCTGCTGTTAGTACTGGTGGTCGTGA TGCGACATCTCTAAGACCTTCATTAGTTCCAGGATCTTCTGCACTGGATCTTGTAAAAAA GAAGTTGATGGATTTTGGTACTCCACTTGCTGTTTCTTCACCAGCCCCAGCCTCGTCAGG AGTAATATCATCTGAAGTAAATGGATCAAAAGCACTTGAATCTACAACCAGAATTCCACA AAAAGAAAATAGCAAAGAGAAGTCAAAAGAAGCTAATGACAATGGCAATTTGTCTGAGTC CTCTTCAGATTCAGAGGATGATGAGAGTGTACCAACCAAAGAGGACTGTATCATCCAATT CAAGGAGATGCTGAAGGAACGTGGAGTAGCACCATTCTCAAAGTGGGAGAAGGAATTACC AAAGATAGTGTTTGATCCACGCTTTAAGGCTATTCCAAGTTACAGTGCTAGAAAAACTCT GTTTGAGCATTATGTCAAGACACGTGCAGATGAAGAAAGAAAGGAGAAGCGTGCAGCACA GAAGGCTGCAGTTGAGGGCTTCAAGCAATTACTGGAAGAAGCAAAGGAGGATATCAGCGA GGATACGGATTATCAATCATTCAAAAAGAAATGGAGTCATGATCCACGCTTCGAGTCCTT AGATCGAAAGGAGAGGGAAGTGCTTCTGAATGAGAGGGTTCTTCAGCTTAGGAAAGCAGC TCAAGAAAAAGCTCATGCTGTACGTGCTGCTGTTATATCTCAGTTCAAGTCCATGCTTCG AGAACAAGGAGATATTACTTTAAATACACGGTGGTCAAAGGTGAAGGATAGCTTAAGAAG TGATCCTCGTTATAAGTCTGTTAAGCATGAAGACAGAGAGACTTTATTCAATGAGTATCT ATCGGAACTGAAGGCTGCTGAACAGGAAGTTGCACGAATTGCAAAAGCAAAACACGATGA AGAGGATAAATTGAAGGAAAGAGAACGTGCTTTGCGAAAACGTAAAGAAAGAGAAGAACA AGAAGTGGAGAGGGTGCGGTCGAAAGCTCGTAGAAAAGAAGCTGTTGAATCTTATCAAGC CTTGCTGGTTGAAATAATTAAGGATCCTCAGGCTTCTTGGACAGAGTCAAAACCTAAATT AGAGAAGGATCCCCAAGGACGTGCAGCTAATCCTCATTTGGATCAGTCTGACTTGGAAAA GCTTTTCCGGGAACATGTGAAGGTGTTGTATGAGCGGTGTGTACAAGAGTTCAAAGTTTT GTTAGCCGAGGTCATAACTGTTGAAGCTTGTTCACGAGAGACAGAAGATGGTAAAACAGT TGCAAATTCTTGGTCAACAGCGAAACAAGTACTCAAAGGTGATCTCAGGTATTCAAAAAT GGCAAGAAAAGATAGTGAAACCTTATGGCGCAGATATGTTGAGGATATTCATCGGAGGCA AAAGTCAACACTCGATGAAGCAGACAAGGCAAGAAGTAAAGGATCTTCTGATTCAAGGAG AAGGTGAAGTGAAGAAGCAGTAAATGTAACTATTTCTAGCTTTCTCGACCTTTCGTCTAA GATCAAGAGTAGTAGTCCTCAAGCATTTAGATTCATCTATCTTTTAAGAGTCGTTAGGAA ACGGAGTACTTGCTGCCAGTTTCTTGGCAGTTTATTTATCCATTCAAAGCCCCAGTGTTT AGAACTTTGTCAAACCTAAGCTTTCATACTTAGGTGGTCATGTTGTAGATTTGATTTCTT TTAATTCCATGTATGTTAGAATTTGAGATCACAGCCAATTCTCTTTCGTAGTATTGAATC GAATCGAGTCATCTCTTTTCCATTTGCTTGGAATGTTTGTGAGATCGTTTGACAGACTCA GAATTGAGTATTATTGTACTTTTCCCCATCAAAACAATGTACAATATCGATAAGTGCTAC ATTGATGCAACTAGTAGGCTAAGAATAGTAAATATGAATCTTGTTGAAACAAAATATTAC ATCACACTACAGATTGTCTAAAGAGTATTGACTGTATTACAAAATTTTCAATTTGAGTAC TCTTCGCGATCATTGATTCTATGTAGATCATGACCTAGACCAATGTAATATAAGTTAACA AGAGCAAAGCGCGAGTCTACCTCGTTATTTTGTTGGAATGAAATCGGCAGGGGGTTTAAT AGGATTGTCTTTGTCAGGGTCTTTCTC