Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc04g008680.3.1
CDS Infomation	DBC1/CARP1-like protein (AHRD V3.3 *** A0A103XRU5_CYNCS)
Sequence	ATGTATACACTCTTTATCCCAAAACTCTTCTTCATTTCTCATATTTTTCTTGTTCAATTT GATCACAATATGATGATAGAGTCTTGGAATCCTCCTCTCCTACATGATTACTCGAAGCTA TCGCGACTACAGAGTAATCGCGACTGCTCAAATAATGGGGTTCTCATGATGGAAGAGTTG GAACTTCCGATGATAGATTTGAACGGTTTAAAAAGTAGAGACGAGAGAGAAGTGATTCGA TGTGAAAACGCGATAGCTAAGGCTTCTTCTGAATGGGGTTTTTTTCAAGTTGTGAATCAT GGTGTGAGCCTTGAATTGCTAAGAAAAATGAGGAATGAACAAATGAAATTGTTTAAAGCA CCATTTGAAATGAAAGCTAATTGTGGATTATTAAATAATTCATATAGATGGGGAAATTCA ACAGCTACTTGTCCAAAACAATTTAATTGGTCAGAAGCTTTTCATATCCCTGTGACAAAA ATCTCAGAAAATGCTTCTTATGGAGAGTTCACAACTTTAAGGGATGTGATGGTGGAATAT GCAACTTCAATGCAAGATTTAGCCAAATCACTTGCTAGTGTTCTTGTGAAGAAATTAGAC CACAAAGATAGTGAAATTGGAGAAATTTGCAATGAAAATTCATGTTTTCTTAGGTTAAAT CACTATCCATCATGTCAATTACCACAAGAAATATTTGGATTAGTGCCACATACAGATAGT GATTTCTTAACTATACTTCATCAAGATGAAGTTGGTGGACTTCAATTAATGAAAGATTCC AAATGGGTTGCTGTTAAGCCTAATCAAAATGCACTTATTGTAAACATCGGAGATCTTTTT CAGTTGGGACATGGTTACTCCGAGAGTTCTGCCGGAGGGCCTGAGAGGTCCTCTCAGCTA CCTACAGGTTCACGTCATTCTTCGATGTTAGGAACCCCCCAAGATGCAGAAATGAATTCT TACACAAGTCACAGTCATCATCCATCAACAGCGCCTAATTATGGTGGGCAATACAGCTCT GTGTATGGTTCAACTGCTCAGCAGATGCCCACTATTGGTGGAAAAGGATCTGGATCATCA GCTTTGGAAAGCCGTAGCGGCTTTGGTGTGGATTCGCCAAAGTTCACAGCAGGTGACTAC ATTTCATCATCCAGCCATGGATATGGTCATAAAGCTGAACAACAATACACTGATAGGGTT TCTGATTATCCAACCCTTGATAGACGATATGGTGAACGACACAACTCTTATGCGGGGAGA GATTTGACAAGTGAACAACCCAGTCGATATTCTGATTCAATTTCTTTTGGTAATAAGCAT CAGGCTGAAAGATATGAACATATGGATCATGTATCTTTATTACGACAAGAGAAAATGCGA CAAGAGCAAATACTGAAGTCTCAGGCATTGCAATCTGCATCCGTTGATGGAGGATCTAGA CAAGCTGAATATCTTGCTGCAAGGAGTGCCGCTGTTCGTCTTGCAGCCCAAGATCCCATA TCTTATAGTAGCAGAATCGACTCGGATCCTCGCACTTTATCAACGTTACCTGGATCATTA CTTCCTGGGCAACATGCTCCTTCTATCCTAGGCGCCGCACCGCAAAGAGCTGTTGAGGAT GTCATGTATGTTCAAAGTTCTATTAATCCTGGTTATGGAGTGAGCCTGCCTCCAGGTAGA GACTATGGGATAGGGAAGGGACTTCATGCAACTTCCGTTGACTCTGACTATCCTAGCAGT GTGTTGACACGTGCTGGTCACTCAAGGCGTCATTCACCTGTTAAAAGGAGAGAGTATTTC TGCAAGGTTTATTCATCCAGTTTGGTTGAAATTGAGAGGGATTATCTCTCACTGGATAGG CGGTATCCTAGGCTTTTCATATCTCCAGAATGCTCAAAGGTAGTTGTAAATTGGCCAAAA GGGAATCTTAAGCTTTCTTTTCATACTCCTGTCAGTTTTGAGCATGATTTTGTTGAAGGA GAGGCTGCAACAGCGCTGAAACGGCTGTCATTGAAACCGTCTGCTGGTGAACCTGAAAAA TCAGAACCTGGAATGACTATATGGAATGCTAAGATGATTCTGATGAGTGGGCTCAGCAGA AATTCTCTGGAAGAGTTATCATCCGATCGAAATTATGATGACCGAATACCTCACATGTGC AATATGCTTAGGTTTGCGGTTCTTAAGCTGGAAAATTCTTTGATGACTGTAGGGGGGCAG TGGGATAGTGTTGATGGTGGTGATCCATCATGTAATGACTCCGCTTTGATTCAGACAGCC CTTAGACATGCAAAGGACATAGCTCATCTTGATTTAAAGAACTGCCAGCAGTGGAACCGT TTTCTTGAGATACACTATGAAAGAGTTGGCAAGGATGGGCGGTTCAGTCATAAAGAAGTC ACTGTTTACTTCGTCCCAGACTTGTCTGAATGCCTCCCTTCATTAGAATCATGGCGTGAG CACTGGTTTACTAAAAAAAAGGATATTGCTGAGAGAGAAAAGGAACTTGCTCTGAGTAAA GAGAAATCCGGTGAGAAGAAAACCCTGAAAGAGTATCAGCATCTTACAGATGCTAAGAGG GGTCTCAAGTCAGAGAAAAACTCTGCATCTGGACAGTCTGCAGAAGCAAGCAAGAAGGAG AATGATGGCAAACTGAAAGAGAGTATAGCTGATAAAGAAGGGTCTAAGAAAAAAGGTGGA GAGAGTAAACAACCTCTTGAAACTGGTAAGGTGGGAAATGATAATGCTGAACCGAATCCA GCTGCTATTGAAACAGATGGTAGTGCAAAAATAGTTAAGAAGAGAGTTATAAAAAGAATT GTTAAACAGAAGATCTCCAATAAGAAAGATTTGGAAACCACAGATGAAGTGAATGAGAAG GCCGATATTAAAGAAACTGGGGATGGAAATATGAGCTCAGAGATTGCTTCCCCCCAGGTT GGAGCATCTGCTAACCCTCCAGTTAAAACTTTTATAAGGAAGAAAATTGTTAAGAAGGTT CCTGTGGTGAAAACTCCAAAAGAAGATGGGATGAAACCTCCTGATGTGGAAAGTGTCAAG GAGGTGGAATCTTCGGAAGATAAGGGAAATAGTAAAACTGATGGAAATAGTACTTCTATC AAGCAGGATGCTGTTGTGAAGAAATTAGTTAAGAGAAAAATAATAAAGAGGGTTCCCAAA CGAAAAGCAGCAACTACAGACACCAACAATGGAGCCACTGGTGTTGCTAGTCTCAATGAT GATGTGAAAGAGGAGAAATCAGTTCAAGCTGAAAGTGAGGTGAAAAATGTGGGTAATAAT AATGCAGAAACTGCAGAGAATGTGAATGTTGTCAACCAAGAACAGAAGGTTAGCCCTAAA ACAAAATCAAAAATAGCTGATGTGAAGCAAGAATCTAAAGAAGAAAAAAAGGCCAAGGAG TTAAGTCTTGCTGGGTCCAAGAAAGAATCCGAAGCAGACAAGCATAAGAGTCCTCAAAAT GATGACCTTTTAAAGCTTAAAGGAAAGGAAGTCCCCAAAGAACAAACAGGAAAGAAAGAT CAGGATGAGAAAATCCTTTCGAAGAGCAAATCAACAAAAGAGATCAAAGAAAAGAGAAGT GAAGATCCTCCTCGGCACCCTGGATTTTTTCTTCAAACAAAAGGGAGCAAGGATATGAAG TTGCGATCATTGTCTCTTTCATTGGATTCTTTGTTGGATTATACTGATAAGGATATTGAA GAGTCAAGATTTGAGCTTTCACTTGTTGCAGAATCCCTGTATGAAATGCTTTACTATAAC ATGGGTTCTCGTCTCTTTACTTTTCTTCAGAAATTACGCTCTAAGTTTTTGATCAAGCGA AACCAGCAGAAAAGACAGCGAGAAGAATCATCCAAGAAGATAAGTGAGGACAAACCAGCC AAGCGTGCAAAGAAGACGGATGAACATAGGGAGGATGACAAATCTACTAAAACTGAATCA CATGGCAAACATGATCAGAAAGATGAAAAATTGCCTGTCAAGGAAGATGCTATTTTGCTA AATAATGCTGAAGAGACAGAAAATGCCGAGGAAATGCCTAAAACTGATGAAGAAGCTTCT GAGATAAAGCCAAATCTAGAATCAGGCAGCAAAGAAGTGTCAACAAAGGTGGAGAAAAAT ACTAAAACTGAGTTTAACAAAGAACTTTTGCAGGCTTTCAGGTTCTTTGACCGAAACAGA GCGGGATATGTTAGGGTCGAGGATATGAGATTAATCCTCCACAACTTGGGGAAATTCCTT TCTCACAGAGACGTCAAGGAACTTGTGCAAAGTGCACTTATAGAGAGCAACACCGGGAGA GACGACCGAATTCTCTACAAGAAGTTGATCGACATGAACTTGTGA

Peptide Sequence

PEP ID	Solyc04g008680.3.1
PEP Infomation	DBC1/CARP1-like protein (AHRD V3.3 *** A0A103XRU5_CYNCS)
Sequence	MYTLFIPKLFFISHIFLVQFDHNMMIESWNPPLLHDYSKLSRLQSNRDCSNNGVLMMEEL ELPMIDLNGLKSRDEREVIRCENAIAKASSEWGFFQVVNHGVSLELLRKMRNEQMKLFKA PFEMKANCGLLNNSYRWGNSTATCPKQFNWSEAFHIPVTKISENASYGEFTTLRDVMVEY ATSMQDLAKSLASVLVKKLDHKDSEIGEICNENSCFLRLNHYPSCQLPQEIFGLVPHTDS DFLTILHQDEVGGLQLMKDSKWVAVKPNQNALIVNIGDLFQLGHGYSESSAGGPERSSQL PTGSRHSSMLGTPQDAEMNSYTSHSHHPSTAPNYGGQYSSVYGSTAQQMPTIGGKGSGSS ALESRSGFGVDSPKFTAGDYISSSSHGYGHKAEQQYTDRVSDYPTLDRRYGERHNSYAGR DLTSEQPSRYSDSISFGNKHQAERYEHMDHVSLLRQEKMRQEQILKSQALQSASVDGGSR QAEYLAARSAAVRLAAQDPISYSSRIDSDPRTLSTLPGSLLPGQHAPSILGAAPQRAVED VMYVQSSINPGYGVSLPPGRDYGIGKGLHATSVDSDYPSSVLTRAGHSRRHSPVKRREYF CKVYSSSLVEIERDYLSLDRRYPRLFISPECSKVVVNWPKGNLKLSFHTPVSFEHDFVEG EAATALKRLSLKPSAGEPEKSEPGMTIWNAKMILMSGLSRNSLEELSSDRNYDDRIPHMC NMLRFAVLKLENSLMTVGGQWDSVDGGDPSCNDSALIQTALRHAKDIAHLDLKNCQQWNR FLEIHYERVGKDGRFSHKEVTVYFVPDLSECLPSLESWREHWFTKKKDIAEREKELALSK EKSGEKKTLKEYQHLTDAKRGLKSEKNSASGQSAEASKKENDGKLKESIADKEGSKKKGG ESKQPLETGKVGNDNAEPNPAAIETDGSAKIVKKRVIKRIVKQKISNKKDLETTDEVNEK ADIKETGDGNMSSEIASPQVGASANPPVKTFIRKKIVKKVPVVKTPKEDGMKPPDVESVK EVESSEDKGNSKTDGNSTSIKQDAVVKKLVKRKIIKRVPKRKAATTDTNNGATGVASLND DVKEEKSVQAESEVKNVGNNNAETAENVNVVNQEQKVSPKTKSKIADVKQESKEEKKAKE LSLAGSKKESEADKHKSPQNDDLLKLKGKEVPKEQTGKKDQDEKILSKSKSTKEIKEKRS EDPPRHPGFFLQTKGSKDMKLRSLSLSLDSLLDYTDKDIEESRFELSLVAESLYEMLYYN MGSRLFTFLQKLRSKFLIKRNQQKRQREESSKKISEDKPAKRAKKTDEHREDDKSTKTES HGKHDQKDEKLPVKEDAILLNNAEETENAEEMPKTDEEASEIKPNLESGSKEVSTKVEKN TKTEFNKELLQAFRFFDRNRAGYVRVEDMRLILHNLGKFLSHRDVKELVQSALIESNTGR DDRILYKKLIDMNL*

Transcript Sequence

Transcript ID	Solyc04g008680.3.1
Transcript Infomation	DBC1/CARP1-like protein (AHRD V3.3 *** A0A103XRU5_CYNCS)
Sequence	AAATAGTCCGATTTCATTTAAATCCGAAATAAAAGCAAAACACTAGATGAATTTTTCGTA TTTATTAGTAAACAAGTAGTTGACATGTACTTGTTCTGATGATAAAAACTGTCAAAAATC TCATAAAATTAATCGAGATAGATGTAGTCAGATTTAACGTCGAAAAACATAGCTATATAT AAAAAGAAAAAAGGCCCAATTCAAGAAGATACATTGTCATTGACAATTGTCATGCATAAA AAAATAGAGATACATTCTTATTGTGACAATTGTCATGAATTTAAATGGTTTAATTTCCTC TTGTTTTTTTCCCCCCCACATGGTGTTATTTTGTCACATTCCTTTCTTTTTCCTCCCCCA CTTTATACATCTAAAAACCATATAAATACATCATGTATACACTCTTTATCCCAAAACTCT TCTTCATTTCTCATATTTTTCTTGTTCAATTTGATCACAATATGATGATAGAGTCTTGGA ATCCTCCTCTCCTACATGATTACTCGAAGCTATCGCGACTACAGAGTAATCGCGACTGCT CAAATAATGGGGTTCTCATGATGGAAGAGTTGGAACTTCCGATGATAGATTTGAACGGTT TAAAAAGTAGAGACGAGAGAGAAGTGATTCGATGTGAAAACGCGATAGCTAAGGCTTCTT CTGAATGGGGTTTTTTTCAAGTTGTGAATCATGGTGTGAGCCTTGAATTGCTAAGAAAAA TGAGGAATGAACAAATGAAATTGTTTAAAGCACCATTTGAAATGAAAGCTAATTGTGGAT TATTAAATAATTCATATAGATGGGGAAATTCAACAGCTACTTGTCCAAAACAATTTAATT GGTCAGAAGCTTTTCATATCCCTGTGACAAAAATCTCAGAAAATGCTTCTTATGGAGAGT TCACAACTTTAAGGGATGTGATGGTGGAATATGCAACTTCAATGCAAGATTTAGCCAAAT CACTTGCTAGTGTTCTTGTGAAGAAATTAGACCACAAAGATAGTGAAATTGGAGAAATTT GCAATGAAAATTCATGTTTTCTTAGGTTAAATCACTATCCATCATGTCAATTACCACAAG AAATATTTGGATTAGTGCCACATACAGATAGTGATTTCTTAACTATACTTCATCAAGATG AAGTTGGTGGACTTCAATTAATGAAAGATTCCAAATGGGTTGCTGTTAAGCCTAATCAAA ATGCACTTATTGTAAACATCGGAGATCTTTTTCAGTTGGGACATGGTTACTCCGAGAGTT CTGCCGGAGGGCCTGAGAGGTCCTCTCAGCTACCTACAGGTTCACGTCATTCTTCGATGT TAGGAACCCCCCAAGATGCAGAAATGAATTCTTACACAAGTCACAGTCATCATCCATCAA CAGCGCCTAATTATGGTGGGCAATACAGCTCTGTGTATGGTTCAACTGCTCAGCAGATGC CCACTATTGGTGGAAAAGGATCTGGATCATCAGCTTTGGAAAGCCGTAGCGGCTTTGGTG TGGATTCGCCAAAGTTCACAGCAGGTGACTACATTTCATCATCCAGCCATGGATATGGTC ATAAAGCTGAACAACAATACACTGATAGGGTTTCTGATTATCCAACCCTTGATAGACGAT ATGGTGAACGACACAACTCTTATGCGGGGAGAGATTTGACAAGTGAACAACCCAGTCGAT ATTCTGATTCAATTTCTTTTGGTAATAAGCATCAGGCTGAAAGATATGAACATATGGATC ATGTATCTTTATTACGACAAGAGAAAATGCGACAAGAGCAAATACTGAAGTCTCAGGCAT TGCAATCTGCATCCGTTGATGGAGGATCTAGACAAGCTGAATATCTTGCTGCAAGGAGTG CCGCTGTTCGTCTTGCAGCCCAAGATCCCATATCTTATAGTAGCAGAATCGACTCGGATC CTCGCACTTTATCAACGTTACCTGGATCATTACTTCCTGGGCAACATGCTCCTTCTATCC TAGGCGCCGCACCGCAAAGAGCTGTTGAGGATGTCATGTATGTTCAAAGTTCTATTAATC CTGGTTATGGAGTGAGCCTGCCTCCAGGTAGAGACTATGGGATAGGGAAGGGACTTCATG CAACTTCCGTTGACTCTGACTATCCTAGCAGTGTGTTGACACGTGCTGGTCACTCAAGGC GTCATTCACCTGTTAAAAGGAGAGAGTATTTCTGCAAGGTTTATTCATCCAGTTTGGTTG AAATTGAGAGGGATTATCTCTCACTGGATAGGCGGTATCCTAGGCTTTTCATATCTCCAG AATGCTCAAAGGTAGTTGTAAATTGGCCAAAAGGGAATCTTAAGCTTTCTTTTCATACTC CTGTCAGTTTTGAGCATGATTTTGTTGAAGGAGAGGCTGCAACAGCGCTGAAACGGCTGT CATTGAAACCGTCTGCTGGTGAACCTGAAAAATCAGAACCTGGAATGACTATATGGAATG CTAAGATGATTCTGATGAGTGGGCTCAGCAGAAATTCTCTGGAAGAGTTATCATCCGATC GAAATTATGATGACCGAATACCTCACATGTGCAATATGCTTAGGTTTGCGGTTCTTAAGC TGGAAAATTCTTTGATGACTGTAGGGGGGCAGTGGGATAGTGTTGATGGTGGTGATCCAT CATGTAATGACTCCGCTTTGATTCAGACAGCCCTTAGACATGCAAAGGACATAGCTCATC TTGATTTAAAGAACTGCCAGCAGTGGAACCGTTTTCTTGAGATACACTATGAAAGAGTTG GCAAGGATGGGCGGTTCAGTCATAAAGAAGTCACTGTTTACTTCGTCCCAGACTTGTCTG AATGCCTCCCTTCATTAGAATCATGGCGTGAGCACTGGTTTACTAAAAAAAAGGATATTG CTGAGAGAGAAAAGGAACTTGCTCTGAGTAAAGAGAAATCCGGTGAGAAGAAAACCCTGA AAGAGTATCAGCATCTTACAGATGCTAAGAGGGGTCTCAAGTCAGAGAAAAACTCTGCAT CTGGACAGTCTGCAGAAGCAAGCAAGAAGGAGAATGATGGCAAACTGAAAGAGAGTATAG CTGATAAAGAAGGGTCTAAGAAAAAAGGTGGAGAGAGTAAACAACCTCTTGAAACTGGTA AGGTGGGAAATGATAATGCTGAACCGAATCCAGCTGCTATTGAAACAGATGGTAGTGCAA AAATAGTTAAGAAGAGAGTTATAAAAAGAATTGTTAAACAGAAGATCTCCAATAAGAAAG ATTTGGAAACCACAGATGAAGTGAATGAGAAGGCCGATATTAAAGAAACTGGGGATGGAA ATATGAGCTCAGAGATTGCTTCCCCCCAGGTTGGAGCATCTGCTAACCCTCCAGTTAAAA CTTTTATAAGGAAGAAAATTGTTAAGAAGGTTCCTGTGGTGAAAACTCCAAAAGAAGATG GGATGAAACCTCCTGATGTGGAAAGTGTCAAGGAGGTGGAATCTTCGGAAGATAAGGGAA ATAGTAAAACTGATGGAAATAGTACTTCTATCAAGCAGGATGCTGTTGTGAAGAAATTAG TTAAGAGAAAAATAATAAAGAGGGTTCCCAAACGAAAAGCAGCAACTACAGACACCAACA ATGGAGCCACTGGTGTTGCTAGTCTCAATGATGATGTGAAAGAGGAGAAATCAGTTCAAG CTGAAAGTGAGGTGAAAAATGTGGGTAATAATAATGCAGAAACTGCAGAGAATGTGAATG TTGTCAACCAAGAACAGAAGGTTAGCCCTAAAACAAAATCAAAAATAGCTGATGTGAAGC AAGAATCTAAAGAAGAAAAAAAGGCCAAGGAGTTAAGTCTTGCTGGGTCCAAGAAAGAAT CCGAAGCAGACAAGCATAAGAGTCCTCAAAATGATGACCTTTTAAAGCTTAAAGGAAAGG AAGTCCCCAAAGAACAAACAGGAAAGAAAGATCAGGATGAGAAAATCCTTTCGAAGAGCA AATCAACAAAAGAGATCAAAGAAAAGAGAAGTGAAGATCCTCCTCGGCACCCTGGATTTT TTCTTCAAACAAAAGGGAGCAAGGATATGAAGTTGCGATCATTGTCTCTTTCATTGGATT CTTTGTTGGATTATACTGATAAGGATATTGAAGAGTCAAGATTTGAGCTTTCACTTGTTG CAGAATCCCTGTATGAAATGCTTTACTATAACATGGGTTCTCGTCTCTTTACTTTTCTTC AGAAATTACGCTCTAAGTTTTTGATCAAGCGAAACCAGCAGAAAAGACAGCGAGAAGAAT CATCCAAGAAGATAAGTGAGGACAAACCAGCCAAGCGTGCAAAGAAGACGGATGAACATA GGGAGGATGACAAATCTACTAAAACTGAATCACATGGCAAACATGATCAGAAAGATGAAA AATTGCCTGTCAAGGAAGATGCTATTTTGCTAAATAATGCTGAAGAGACAGAAAATGCCG AGGAAATGCCTAAAACTGATGAAGAAGCTTCTGAGATAAAGCCAAATCTAGAATCAGGCA GCAAAGAAGTGTCAACAAAGGTGGAGAAAAATACTAAAACTGAGTTTAACAAAGAACTTT TGCAGGCTTTCAGGTTCTTTGACCGAAACAGAGCGGGATATGTTAGGGTCGAGGATATGA GATTAATCCTCCACAACTTGGGGAAATTCCTTTCTCACAGAGACGTCAAGGAACTTGTGC AAAGTGCACTTATAGAGAGCAACACCGGGAGAGACGACCGAATTCTCTACAAGAAGTTGA TCGACATGAACTTGTGAAGTTTAGCTGCAAGATTAGCTAGTGGATTATTATCAAATTTCA GTGCTGCCTTTTCAATGAATTGTTAAATGGTGTGAACAAACGATGCCCTAGAATAGACTT GAATTATCGGCTAGTGATTAAATAAGGAAAAATCTTAAAACCGAATCATTACAGAATATT TGATGCTTGTGCAATGTATTTTTCATAGTGGGCATTCAGTTCTTAGTGTACGACTTGGTT ATCTCCAATATGATGATTATATTCAGTGGCCTATGCCAGATAATACACAAAGCAGATGGA AGTTGTGGAATCTGCCCGTCTCTACGATTTTATTCGTCCGTAAAAACATACTTCCCTTCT CCTTGTTATGGTTTAATCATTCTGTTGGTTGTATGGTTGGGTTATTTGGGGTACATCATC TCGAGGTTATGGAGATGTTTTTGTCGTCTTCGTATTCGATTTACACAGGATGTGAGCAGG CACAGTTTGTTGGTAAATCACCATGTGTATATGGTCAAAATGTTCTTCCTTGCGTGTGTG TGTATATGAACTGTTTAGTGAAAATCTCCTTTCAACATTTTTCCTAAAACTACTTGTATC ATTTCTTCCCCTTGTGTTAGGAATCAAACTCTATACACAGCGAGTTCAGTAGAGATAATA TCTACGT