Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc04g008410.2.1
CDS Infomation	Pentatricopeptide repeat (PPR) superfamily protein (AHRD V3.3 *** AT1G03100.1)
Sequence	ATGATCACTCTCCAGAAGTTGAACTTTAGGATGACAGCTTTCCCTTATTCTTTGCTTCGG TTGTTTGCTGTCAATGGTGATTATATAGTTTTCAGACACACAAGTCAGTCTGATCGGAGT AGTAAGAATGTCAATCGGTCAGTTGGCTTTTTTTGGGGCAACATAGAGATTCAGGACGTA GTCAACCGCACTGTGTTTGCTCAGACTGCTCCATTTTCTACCATTGCTGGGACAATCCTT GTCCAGGCTCAAGACCTTGGTAAAATGTCTGAAGAGTTCGAAAATGATATTGATGAAAAT AAACTTGATAATGCATGGGCTGTGTATGAGAGGCACATGCAAATGGAAGGGTTTCCTAGA AAATCAATTGTTAATAAACTTCTAGCAGCCAGTGCTGAAAGCTCAGATCTTGGACAGCTG GACAGGGCTTATGGCTTGGTTGAACAAGCATTTGAGAAAAACAAGCATGACTTGCTTGAG AGGAATACTCTTATATATCTCTCTTTAGCTTTTGCCAAATGTGGATCACCTATTCCCGCA TCTACTCTTTTAAGGAAGCTTGTGGAAGCAGAGAAGTATCCACCTGTGAGTGCTTGGTCT GCAATCCTGGCTTATATGTCACAGACCTCTACTGGATCCTACCTTGCTGTTGAATTGGTC CTTGAAATAGGTTACTTATTCCAGGATGGAAGAGTTGATTCCCGTAAAAAGAGCAACGAA TTTCTGCTTTTCATGAAGCCTAATGCCACTTGTTTCAACATTGCTTTAGCTGGATGTCTT CTGTTTGGAACCACTAGAAAAGCAGAGCAGCTCCTCGACATGATGCCTCGAATCAACTTG AAAGCTGATGCTACTTTACTAATCATAATGGCTCATATTTATGAGAAGAACGGACGAAAG GAGGAGCTCAAGAAGCTTAAGAGAGACATGGAAGAGGCCCCTAATGTGACGGAGATGCAG TTTCGTCAGTTCTATAATTGTTTGCTTTCATGCTTTCTGAAGTTTGGAGATCTTGAATCT ACATCCCGCATGGTTCTAGAAATGCTTCGCAAGGCAGAGAAAGCTAAAAATTCTCTTGGT ATAGCTAGTTTGCTTATTGAGGTTTCTAGAAGTGGCGATACATTGTGTTCAAATGGTCTT CCTGAGGATGCCCATCTTCGAAAGCCAGATGAATCAGGAAGTTTGGTATCATATGAAGAT ATCTGTAGGGACAGAAAGTTTTCAAAACTGCAGACCATTGCTAAAAACTTACTTGATGTC TTGGTAACTAAGTTGCAGAAGCAAATTGAATTTATTACAACTGAACATGGTATTCTCCAG CCTACTGAGAAATTATATGTTAAATTGGTAAAGGCTTTCCTAGAAGCTGGGAGAACAAAA GATCTTGCAGAATTTCTAATTAAGGCAGAGAAACAAGATTCTCCAGTTTCAGTTGATGAT TCTGCCTTGGTTCATGTGATAAACTCTTGTATTTCACTTGGATGGTTAGATCAGGCACAT GACCTTCTGGATGAAATGCGATTGGCTGGTGTTAGAACTGGTTCTTCTGTTTATGCATCT CTTTTGAAAGCATACTGTAAAGAGAATCGAGCCGGGGAAGTTGCATCACTGCTTAGAGAT GCTCGTAAAGCTGGGATTCAGATAGATGCAAGCTGTTATGAAGTATTGATCCAGTCCAGG GTGATACAGAAGGACTCTCAAGGGGCCCTTGACCTGTTCAAGGAGATGAAAGAGGCTAAG ATACCAAGAGCTGGTCATCAAGAATTTGAGAAATTGGTGAAAGGGTCTGCAGAAGGAGGT GAAGCTAGTTTAATGATGACGCTTTTGCATGAAATCAAGGAAGGGCAAAAAGTAGATTAT GGAGTTCATGACTGGAATAATGTAATTCACTTCTTCTGCAAAAAGAGGTTGATGCAAGAT GCCGAAAAGGCTTTTAAGAAGATGAGGAGTTTGGGCCATTTTCCAAATGTACAAACTTTT CATTCTCTGGTCACTGGTTATGCTGCCATTGGCGGAAAATATGTCGAGGTGACAGAACTA TGGGGTGAAATGAAGTCTCTTGCTTTTGCTAGTGGAATGAAGTTCGATCAGGAACTTTTA GATGCTGTGCTTTATACATTCGTTAGAGGTGGTTTTTTTGTTCGAGCAATTGAAGTCGTA CAGATGATGGAGAAAGGCAATATGTTTATTGACAAGTATAAATATCGCACCCTCTTCTTA AAATACCACAAAACACTCTACAAGGGGAAGGCTCCAAAATTCCAGTCAGAAACTCAGATG AAAAAGAGAGAGGCAGCATTGAACTTTAAGAGATGGGCTGGGTTATACTGGGACTTGTTG CTAGCAGATCAAGACATTTCCATGGTTCATTCTTATTAA

Peptide Sequence

PEP ID	Solyc04g008410.2.1
PEP Infomation	Pentatricopeptide repeat (PPR) superfamily protein (AHRD V3.3 *** AT1G03100.1)
Sequence	MITLQKLNFRMTAFPYSLLRLFAVNGDYIVFRHTSQSDRSSKNVNRSVGFFWGNIEIQDV VNRTVFAQTAPFSTIAGTILVQAQDLGKMSEEFENDIDENKLDNAWAVYERHMQMEGFPR KSIVNKLLAASAESSDLGQLDRAYGLVEQAFEKNKHDLLERNTLIYLSLAFAKCGSPIPA STLLRKLVEAEKYPPVSAWSAILAYMSQTSTGSYLAVELVLEIGYLFQDGRVDSRKKSNE FLLFMKPNATCFNIALAGCLLFGTTRKAEQLLDMMPRINLKADATLLIIMAHIYEKNGRK EELKKLKRDMEEAPNVTEMQFRQFYNCLLSCFLKFGDLESTSRMVLEMLRKAEKAKNSLG IASLLIEVSRSGDTLCSNGLPEDAHLRKPDESGSLVSYEDICRDRKFSKLQTIAKNLLDV LVTKLQKQIEFITTEHGILQPTEKLYVKLVKAFLEAGRTKDLAEFLIKAEKQDSPVSVDD SALVHVINSCISLGWLDQAHDLLDEMRLAGVRTGSSVYASLLKAYCKENRAGEVASLLRD ARKAGIQIDASCYEVLIQSRVIQKDSQGALDLFKEMKEAKIPRAGHQEFEKLVKGSAEGG EASLMMTLLHEIKEGQKVDYGVHDWNNVIHFFCKKRLMQDAEKAFKKMRSLGHFPNVQTF HSLVTGYAAIGGKYVEVTELWGEMKSLAFASGMKFDQELLDAVLYTFVRGGFFVRAIEVV QMMEKGNMFIDKYKYRTLFLKYHKTLYKGKAPKFQSETQMKKREAALNFKRWAGLYWDLL LADQDISMVHSY*

Transcript Sequence

Transcript ID	Solyc04g008410.2.1
Transcript Infomation	Pentatricopeptide repeat (PPR) superfamily protein (AHRD V3.3 *** AT1G03100.1)
Sequence	TCATACTCTTGATTTTGGCCCAAAATTATTCTCTTTGGAGAGGCCCAACATCAAGTTTAT GTCACACCGTCACAGTCATCTTTCTTCGTCTCCGGCGAACTCTGCTTCTCTCCGACCAAA AAAAAATTGACCGCCAACATTCAGCATGAACTAAAGAGCTAGAAATGCTACTTGGAGAAA ATGATCACTCTCCAGAAGTTGAACTTTAGGATGACAGCTTTCCCTTATTCTTTGCTTCGG TTGTTTGCTGTCAATGGTGATTATATAGTTTTCAGACACACAAGTCAGTCTGATCGGAGT AGTAAGAATGTCAATCGGTCAGTTGGCTTTTTTTGGGGCAACATAGAGATTCAGGACGTA GTCAACCGCACTGTGTTTGCTCAGACTGCTCCATTTTCTACCATTGCTGGGACAATCCTT GTCCAGGCTCAAGACCTTGGTAAAATGTCTGAAGAGTTCGAAAATGATATTGATGAAAAT AAACTTGATAATGCATGGGCTGTGTATGAGAGGCACATGCAAATGGAAGGGTTTCCTAGA AAATCAATTGTTAATAAACTTCTAGCAGCCAGTGCTGAAAGCTCAGATCTTGGACAGCTG GACAGGGCTTATGGCTTGGTTGAACAAGCATTTGAGAAAAACAAGCATGACTTGCTTGAG AGGAATACTCTTATATATCTCTCTTTAGCTTTTGCCAAATGTGGATCACCTATTCCCGCA TCTACTCTTTTAAGGAAGCTTGTGGAAGCAGAGAAGTATCCACCTGTGAGTGCTTGGTCT GCAATCCTGGCTTATATGTCACAGACCTCTACTGGATCCTACCTTGCTGTTGAATTGGTC CTTGAAATAGGTTACTTATTCCAGGATGGAAGAGTTGATTCCCGTAAAAAGAGCAACGAA TTTCTGCTTTTCATGAAGCCTAATGCCACTTGTTTCAACATTGCTTTAGCTGGATGTCTT CTGTTTGGAACCACTAGAAAAGCAGAGCAGCTCCTCGACATGATGCCTCGAATCAACTTG AAAGCTGATGCTACTTTACTAATCATAATGGCTCATATTTATGAGAAGAACGGACGAAAG GAGGAGCTCAAGAAGCTTAAGAGAGACATGGAAGAGGCCCCTAATGTGACGGAGATGCAG TTTCGTCAGTTCTATAATTGTTTGCTTTCATGCTTTCTGAAGTTTGGAGATCTTGAATCT ACATCCCGCATGGTTCTAGAAATGCTTCGCAAGGCAGAGAAAGCTAAAAATTCTCTTGGT ATAGCTAGTTTGCTTATTGAGGTTTCTAGAAGTGGCGATACATTGTGTTCAAATGGTCTT CCTGAGGATGCCCATCTTCGAAAGCCAGATGAATCAGGAAGTTTGGTATCATATGAAGAT ATCTGTAGGGACAGAAAGTTTTCAAAACTGCAGACCATTGCTAAAAACTTACTTGATGTC TTGGTAACTAAGTTGCAGAAGCAAATTGAATTTATTACAACTGAACATGGTATTCTCCAG CCTACTGAGAAATTATATGTTAAATTGGTAAAGGCTTTCCTAGAAGCTGGGAGAACAAAA GATCTTGCAGAATTTCTAATTAAGGCAGAGAAACAAGATTCTCCAGTTTCAGTTGATGAT TCTGCCTTGGTTCATGTGATAAACTCTTGTATTTCACTTGGATGGTTAGATCAGGCACAT GACCTTCTGGATGAAATGCGATTGGCTGGTGTTAGAACTGGTTCTTCTGTTTATGCATCT CTTTTGAAAGCATACTGTAAAGAGAATCGAGCCGGGGAAGTTGCATCACTGCTTAGAGAT GCTCGTAAAGCTGGGATTCAGATAGATGCAAGCTGTTATGAAGTATTGATCCAGTCCAGG GTGATACAGAAGGACTCTCAAGGGGCCCTTGACCTGTTCAAGGAGATGAAAGAGGCTAAG ATACCAAGAGCTGGTCATCAAGAATTTGAGAAATTGGTGAAAGGGTCTGCAGAAGGAGGT GAAGCTAGTTTAATGATGACGCTTTTGCATGAAATCAAGGAAGGGCAAAAAGTAGATTAT GGAGTTCATGACTGGAATAATGTAATTCACTTCTTCTGCAAAAAGAGGTTGATGCAAGAT GCCGAAAAGGCTTTTAAGAAGATGAGGAGTTTGGGCCATTTTCCAAATGTACAAACTTTT CATTCTCTGGTCACTGGTTATGCTGCCATTGGCGGAAAATATGTCGAGGTGACAGAACTA TGGGGTGAAATGAAGTCTCTTGCTTTTGCTAGTGGAATGAAGTTCGATCAGGAACTTTTA GATGCTGTGCTTTATACATTCGTTAGAGGTGGTTTTTTTGTTCGAGCAATTGAAGTCGTA CAGATGATGGAGAAAGGCAATATGTTTATTGACAAGTATAAATATCGCACCCTCTTCTTA AAATACCACAAAACACTCTACAAGGGGAAGGCTCCAAAATTCCAGTCAGAAACTCAGATG AAAAAGAGAGAGGCAGCATTGAACTTTAAGAGATGGGCTGGGTTATACTGGGACTTGTTG CTAGCAGATCAAGACATTTCCATGGTTCATTCTTATTAA