Plant GARDEN How To ▶︎

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Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g008230.3.1

CDS Infomation

Pectin lyase-like superfamily protein (AHRD V3.3 *** AT1G48100.1)

Sequence

ATGGAGAAAATATTTCTTTTACTATGTCTTATTATTATTATTATTACTAGTAATTCTATC
AATGTTGATGCAAGACATCACATTTCCAAGAAAACAAAGAGCAAAAAAGTTATTAGTCAT
AATAATAATGCTCCTAGTCCTATCGAAGGTAGCGTAAACGAACCATCACCATCACCATTA
CCATCATCATCACCAGTTTCTTCTCCTAGTAGTAATGTAGTACCGTCCGATCCGAGTTAC
GGAGGGGCCCCCACTTTGGACCCGGAAGAGGACTGCATTTTCGATGTCATGGAATATGGA
GCCGTCGGTGACGGCTCCACGGATGACACCGAAGCGTTTGTCGCGGCTTGGAAAGCCGCG
TGTCAAGTTGAGTCCGCGGTGCTATTAGCTCCCGCGGACCGTATTTTTATGATCACTTCC
ACTATTTTCTATGGTCCTTGCAAGCCCGGACTCGAATTTCGCGTAAATGGGGTGTTAATG
ACACCAGAAGGACCAGATTGTTGGCCTAAAAAAGATAGTAAAAGGCAATGGATTGTGTTT
TATAAACTTGATAATATGACTTTTAGTGGGACTGGTACTATTGAAGGTAATGGTGAAAAA
TGGTGGGAACTCCCTTGCAAACCTCATAGGGGACCTAATGGCTCAACTTTACCTGGACCA
TGTGACAGTCCTTCTATGATAAGATTTTTCATGAGCTCAAATTTGACGGTGCGAGGTTTA
AGAATACAAAATAGTCCTATGTTTCACATGAAATTCGATGGATGCGAAGGAGTATTGATA
GACCAATTATCAATTTCTTCGCCTAAGCTTAGTCCAAACACTGACGGAATTCATATCGAG
GACACCAAGTCTGTAGGAATTTACAACTCCGTCATAGCTAATGGGGATGATTGCATATCA
ATAGGGCCTGGTTGTTCAAATGTTGAGATTGAAGCAGTCACATGTGGGCCTAGTCACGGG
ATCAGTATTGGGAGCCTAGGGGTGCACAATAGCCAGGCATGTGTGTCGAACATAACGGTC
CGTAACGCCATTATTCGCGATTCGGACAACGGAGTTCGGATCAAGACATGGCAAGGAGGT
TCAGGATCAGTAACAGGGCTATCATTTGACACAATTCAGATGGAAAATGTGCGGAACTGC
ATCATCATAGACCAATACTATTGCCTCTCAAAAGGCTGTCGGAACGAGACGTCCGCTGTA
AGCGTGGGCGACATCTCGTACCGGAGCATCAAGGGCACCTACGACGTAAGGAGCGCCCCC
ATACACTTTGCGTGTAGTGACACTGTAGCCTGCACTAATATTACAATGTCTGAAGTTGAA
CTCTTACCACATGAAGGCGAGCTCATGGAAGATCCTTTCTGCTGGAACGCTTATGGAATT
CAGCAGACGTTAACGATTCCTCCCATTGACTGCTTGCAAGATGGAATGCCACTGGCAATT
GGAGAGACTGTTGACTATTCCTGCAGTATCTGA

Peptide Sequence

PEP ID

Solyc04g008230.3.1

PEP Infomation

Pectin lyase-like superfamily protein (AHRD V3.3 *** AT1G48100.1)

Sequence

MEKIFLLLCLIIIIITSNSINVDARHHISKKTKSKKVISHNNNAPSPIEGSVNEPSPSPL
PSSSPVSSPSSNVVPSDPSYGGAPTLDPEEDCIFDVMEYGAVGDGSTDDTEAFVAAWKAA
CQVESAVLLAPADRIFMITSTIFYGPCKPGLEFRVNGVLMTPEGPDCWPKKDSKRQWIVF
YKLDNMTFSGTGTIEGNGEKWWELPCKPHRGPNGSTLPGPCDSPSMIRFFMSSNLTVRGL
RIQNSPMFHMKFDGCEGVLIDQLSISSPKLSPNTDGIHIEDTKSVGIYNSVIANGDDCIS
IGPGCSNVEIEAVTCGPSHGISIGSLGVHNSQACVSNITVRNAIIRDSDNGVRIKTWQGG
SGSVTGLSFDTIQMENVRNCIIIDQYYCLSKGCRNETSAVSVGDISYRSIKGTYDVRSAP
IHFACSDTVACTNITMSEVELLPHEGELMEDPFCWNAYGIQQTLTIPPIDCLQDGMPLAI
GETVDYSCSI*

Transcript Sequence

Transcript ID

Solyc04g008230.3.1

Transcript Infomation

Pectin lyase-like superfamily protein (AHRD V3.3 *** AT1G48100.1)

Sequence

GCCACATAAAAAAAACACACACACACACAAAAAAAGTAGTACAATAACATTAAAGTTTTT
TTTTTTTTGTAAAATTTTAGTTATTTTTTCCTTCAAATGGAGAAAATATTTCTTTTACTA
TGTCTTATTATTATTATTATTACTAGTAATTCTATCAATGTTGATGCAAGACATCACATT
TCCAAGAAAACAAAGAGCAAAAAAGTTATTAGTCATAATAATAATGCTCCTAGTCCTATC
GAAGGTAGCGTAAACGAACCATCACCATCACCATTACCATCATCATCACCAGTTTCTTCT
CCTAGTAGTAATGTAGTACCGTCCGATCCGAGTTACGGAGGGGCCCCCACTTTGGACCCG
GAAGAGGACTGCATTTTCGATGTCATGGAATATGGAGCCGTCGGTGACGGCTCCACGGAT
GACACCGAAGCGTTTGTCGCGGCTTGGAAAGCCGCGTGTCAAGTTGAGTCCGCGGTGCTA
TTAGCTCCCGCGGACCGTATTTTTATGATCACTTCCACTATTTTCTATGGTCCTTGCAAG
CCCGGACTCGAATTTCGCGTAAATGGGGTGTTAATGACACCAGAAGGACCAGATTGTTGG
CCTAAAAAAGATAGTAAAAGGCAATGGATTGTGTTTTATAAACTTGATAATATGACTTTT
AGTGGGACTGGTACTATTGAAGGTAATGGTGAAAAATGGTGGGAACTCCCTTGCAAACCT
CATAGGGGACCTAATGGCTCAACTTTACCTGGACCATGTGACAGTCCTTCTATGATAAGA
TTTTTCATGAGCTCAAATTTGACGGTGCGAGGTTTAAGAATACAAAATAGTCCTATGTTT
CACATGAAATTCGATGGATGCGAAGGAGTATTGATAGACCAATTATCAATTTCTTCGCCT
AAGCTTAGTCCAAACACTGACGGAATTCATATCGAGGACACCAAGTCTGTAGGAATTTAC
AACTCCGTCATAGCTAATGGGGATGATTGCATATCAATAGGGCCTGGTTGTTCAAATGTT
GAGATTGAAGCAGTCACATGTGGGCCTAGTCACGGGATCAGTATTGGGAGCCTAGGGGTG
CACAATAGCCAGGCATGTGTGTCGAACATAACGGTCCGTAACGCCATTATTCGCGATTCG
GACAACGGAGTTCGGATCAAGACATGGCAAGGAGGTTCAGGATCAGTAACAGGGCTATCA
TTTGACACAATTCAGATGGAAAATGTGCGGAACTGCATCATCATAGACCAATACTATTGC
CTCTCAAAAGGCTGTCGGAACGAGACGTCCGCTGTAAGCGTGGGCGACATCTCGTACCGG
AGCATCAAGGGCACCTACGACGTAAGGAGCGCCCCCATACACTTTGCGTGTAGTGACACT
GTAGCCTGCACTAATATTACAATGTCTGAAGTTGAACTCTTACCACATGAAGGCGAGCTC
ATGGAAGATCCTTTCTGCTGGAACGCTTATGGAATTCAGCAGACGTTAACGATTCCTCCC
ATTGACTGCTTGCAAGATGGAATGCCACTGGCAATTGGAGAGACTGTTGACTATTCCTGC
AGTATCTGA