Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc04g008120.2.1
CDS Infomation	NBS-LRR resistance protein-like protein (AHRD V3.3 *** A1Y9Q6_9SOLN)
Sequence	ATGGAAAAAGGAGAAAAATCATTGCTACTATTAGAGGAACAAAAAACAAGAATCACGAAT CTTATTGATGATTTCTTGAATGGCTTGAAGCAAATAATGAACAAAGAAGAAGAATTCATT GCTTCAAGATTGGATGGTATTGAAAAGCTAAGAATGGATCTAAGATTCCTTAGAACATTT GTCTTGTTTGGGAATTCGACGAATTTGAATGGCTTTTATTTCAGGATGAGTACTCATAAA TTCAAATTCAATGTACGTACTCAGTTCCTTTTCCATAGAGATGAGTTAATCCTAGAGAAA TACCACATGGAACGTCTTGCCCCTCTGCTGCTTGAAGAGATAGGAAATTGTTTGAATTTG AAGAATGATTATGTAGCCACGGCGATAGACATAAAATTCTATGAATACCTCATCAGACAT CTCCATGATCTACCAAAGTACCGTTCTCAATTGCTTCACCACCAGATGACTGAATACAAG ATTCTTCAGCAAGTATGCAGACATCTGATAGATTTCTATCCTATCCTCGCGGCCAACAAA ACAAGTACTGAATATCTATATCCTCGCTTCCAATTTACTACTCATAGAGTAACACAATTC TGTTTTGATCTTTGGACTGGACATCATTATGTCTCTGAATGCTCTTCCAAGATCACTTCT CTACTCATCGACATAATCCCTCTTGAGTTGGAGGTTCTATACATTTCTACTTGTAAGCTC ATCAAAGAATCAACGTCAAAAGAACTAGAAGGATTTGTTAAGCAAATCCTAAAAACATCT CCAAGGATTCTTCAACATTATCTCATTCATCTCCAAGGACGCATGGCCGGTGTAGTAGCC GTCAATTATGCTCCAACTCGAAGCATTAGTGTCATGATGGAGTTCCTATTGATCTTTCTC ACTGATATGCCAAAGCGGTTTATCCATCGTGAAAAATTGAACGATATGTTGGCACATGCT GGAATGCTTACCAGAAAAATATCTTTTCTGGTGAGCAAGCTGTTGGAGGAGATCTCTGAG GATAATATCAATGAAGCGGACTTTTCAGCTCCGGACTTTTTGCAAGAAATTGAACAAATG AAGGGAGATATCAGACACATTTTTTTAAAAGCTCCTGAGTCATCTCAACTTCGGTTTCCT ATGGATGATGGTTTCCTCTTCATGAATCTTCTACTCAGACATTTAAATGATTTACTCATT TCCAATGCTTATTCAGTTTTTCTCATAAAAAAAGAAATTGGGATGGTGAAAGAAAGCCTT GAATTCCTAATATCATCTTTCAGGAAAGTCAGGAAAACATTGGATGAGAGTACTAGTGGA GTAGTTAAAGATTGTTGGGTGCGTGCTTTGGATGTGGCATATGAGGCAGAACATGTCATT AATTCCATTCTTGTCAGAGATAAAGCTCTCTCGCATCTCCTCTTCTCACTTCCGAGTGTC ACTGATAAGATCAAACTTATCGTGGAACAAGTCACCAGGTTTCAGCTGGAGGATAAGAAT GGGGATGGCCCCCTTGATGCAAAGTCTTCCTCCCAGCCAACTCAGTCAACTTCATCACCT TTTGTTGAGGTAACAGTAGGTCATGAGAAAGAAGAATCCCAGATCATTGACCAGCTCCTT GATGAACATGAATCTGAGCTTGATGTCATTTCCATTGTCGGAATGCCAGGACTCGGTAAA ACTACTCTGGCCAACAAAGTGTATAAAAATACATTAGTTGCTAGTCATTTCCATGTCCGT GCTTGGTGCACTGTTTCCCAAAAGTATAACAAGTCAAAGGTGTTGCTGGAGATTCTTCAG CAAGTTACTGCCTCTGAAGAAGAAAAAAAAGTGGATGACCTGGCTGAAAAGCTACGAACA GCACTACTCGATAAAAGGTATCTCATCGTCTTGGATGATGTGTGGGATATTGCAACTGGG GAGATGTTAATAGCCTGTTTTCCTAAGGTTAAGAGAGGAAATAGAGTTATTTTAACTAGC CGAAGTAGTGAGGTAGGTTTGAAAGTTAAATGCCGTAGTGATCCTCTCAACCTTGAACTT TTAACACCTGAAGAAAGTTGGGATTTATTCGAAAAAAGGGTATTTGGAGATGAAGGAAGC TGCCCTGCTGAACTGTCAAAAGTTGGACACCAAATAGTTGAGAAATGTAAGGGTCTTCCC TTGGCTATTGTTTTGATTGCTGGAGTAATTGTTAGAGGGAAGAAAAAGGAAAAGGATTTT TGGCTTAAGATACTACATAATCTGGATTCCTTTATTTCTACCAACATCAATTTGGTTATG CAATTAAGTTATGACCATTTACCATGCCACCTGAAGCCGTTGCTGCTTTACTTTGCAACA ACTCAAAAGAGCCAACGAACTCCAGTCTCTACATTGATGCAGTTGTGGATGGCCGAAGGG TTTGTGGATCATGATAGTTTAGAGGAAGTAACTCAAAGTTACTTGGATGCTCTAATTTCC AGTAGCCTGATAATGGTGGATCATATCCCCTCCGAGAGTATTTGGTGGATGCCTTCAATG ATCAAGGTTTGCTATGTGCATGATGTTGTGCACGATTTTTGTTCAGAAAAAGCCAAAAAG CAGAAGTTTCTCAAGTTAATCAATTCAGGTGATACATTTCATGCTTCAGATTTCCTACAC CATCGTCTAACCATTCATACTGACAACAGGAAACTCCACAAAAAATGTGCTTTATTCAAT TCTAATAAGTGCTTAGCTGTTAGTAAGCATCTCATATCTTTAAAAGTGAGTGGTCCACTT GATGACTTCAGATATATCTGTCACACAAGACCCTTTGGACTTGTTAGAGTGTTGCAACTG GATTTCATTGTTCTGAAAGGTTCTTTAATTGAAGAAATAGGGTCCTTATTTCATTTGAGG TTCTTAAGCATTCATGCTTTGGGAAAAGCTATCCCAGTATCGTGGTTGAACCTCCAGAAT CTGGAAACTCTGTTCATCAATATACATTATTCCACCATGGTATTACTGCCTAGAATATTG CAACTGTCAAAGCTGAAACATGTGAAAATTAACGTATGTTCTTTCTTTGAAGAGAAAGAG GATATCCAAAGTAGAATATTGGAATCTGGGAATTCTTCAAACTTGACAACTCTATCCGGA GTTGTTATCTCATATTCTGAAGGCATGAGTGATGATGCTCTGGAGAAGTTCCCAATTCTT CAGCACCTTGATTGCATCATCATGGAATCGCAGTATCCTCCTACACACGACTATTGGTTT CCCAAGCTTGATGTACTTAATAAACTCGAATCATTCATAGCAAGACACAAGCGCAATGAA TATCCCTCGTTAATCCGACAACCCAATGGATATCACTTCCCTACAAGCTTGAAAGAGTTA CGGTTGTCTGGTTTTCTCCTGAGACCTGATTTGTTGTCAGCAATCGCAGCATTGCCTAAG CTTGATATTACTGAGTTAAACCACTGTAATTTCGTGGATAACAAATGGGACGCAAGTGAG GACATCTATCTAAGTCTTAAGACTTTGATTTTGCGAGATGTCCAATTATCAGAATGGCAA GTTGAGAGCGATACTTTTCCCAAGCTTGAGAAATTAATACTAAAACTTTGTGCACTTTGC GAGATCCCTTGTGCATTTATAGATATAGACACTTTAAAGTCCATTGATTTAAGTTATGTT GGGCGTGAGCTTGGAGATTCAGCCATTGAGATTAAGAAAAATGTAGCAGATTTCACAGGA GAGGACAGACTTGATGTCCACACATCACATTTGACTGGCAACCAACACGAAGAAACAGAG GATGAAGATGAGAGTGATTGA

Peptide Sequence

PEP ID	Solyc04g008120.2.1
PEP Infomation	NBS-LRR resistance protein-like protein (AHRD V3.3 *** A1Y9Q6_9SOLN)
Sequence	MEKGEKSLLLLEEQKTRITNLIDDFLNGLKQIMNKEEEFIASRLDGIEKLRMDLRFLRTF VLFGNSTNLNGFYFRMSTHKFKFNVRTQFLFHRDELILEKYHMERLAPLLLEEIGNCLNL KNDYVATAIDIKFYEYLIRHLHDLPKYRSQLLHHQMTEYKILQQVCRHLIDFYPILAANK TSTEYLYPRFQFTTHRVTQFCFDLWTGHHYVSECSSKITSLLIDIIPLELEVLYISTCKL IKESTSKELEGFVKQILKTSPRILQHYLIHLQGRMAGVVAVNYAPTRSISVMMEFLLIFL TDMPKRFIHREKLNDMLAHAGMLTRKISFLVSKLLEEISEDNINEADFSAPDFLQEIEQM KGDIRHIFLKAPESSQLRFPMDDGFLFMNLLLRHLNDLLISNAYSVFLIKKEIGMVKESL EFLISSFRKVRKTLDESTSGVVKDCWVRALDVAYEAEHVINSILVRDKALSHLLFSLPSV TDKIKLIVEQVTRFQLEDKNGDGPLDAKSSSQPTQSTSSPFVEVTVGHEKEESQIIDQLL DEHESELDVISIVGMPGLGKTTLANKVYKNTLVASHFHVRAWCTVSQKYNKSKVLLEILQ QVTASEEEKKVDDLAEKLRTALLDKRYLIVLDDVWDIATGEMLIACFPKVKRGNRVILTS RSSEVGLKVKCRSDPLNLELLTPEESWDLFEKRVFGDEGSCPAELSKVGHQIVEKCKGLP LAIVLIAGVIVRGKKKEKDFWLKILHNLDSFISTNINLVMQLSYDHLPCHLKPLLLYFAT TQKSQRTPVSTLMQLWMAEGFVDHDSLEEVTQSYLDALISSSLIMVDHIPSESIWWMPSM IKVCYVHDVVHDFCSEKAKKQKFLKLINSGDTFHASDFLHHRLTIHTDNRKLHKKCALFN SNKCLAVSKHLISLKVSGPLDDFRYICHTRPFGLVRVLQLDFIVLKGSLIEEIGSLFHLR FLSIHALGKAIPVSWLNLQNLETLFINIHYSTMVLLPRILQLSKLKHVKINVCSFFEEKE DIQSRILESGNSSNLTTLSGVVISYSEGMSDDALEKFPILQHLDCIIMESQYPPTHDYWF PKLDVLNKLESFIARHKRNEYPSLIRQPNGYHFPTSLKELRLSGFLLRPDLLSAIAALPK LDITELNHCNFVDNKWDASEDIYLSLKTLILRDVQLSEWQVESDTFPKLEKLILKLCALC EIPCAFIDIDTLKSIDLSYVGRELGDSAIEIKKNVADFTGEDRLDVHTSHLTGNQHEETE DEDESD*

Transcript Sequence

Transcript ID	Solyc04g008120.2.1
Transcript Infomation	NBS-LRR resistance protein-like protein (AHRD V3.3 *** A1Y9Q6_9SOLN)
Sequence	TCAGATCTCTAGACTTTGATAAACTAATTGAAAGTTCAACATTTGCAGAACTAACTTCAA CATTTGCTTCTTGTAAATCTGCAACAAGGCAAACTACCATTTGAGAGTAAAGAAAAAGAT ATTGAAAGCTGGTTGAATGGAAAAAGGAGAAAAATCATTGCTACTATTAGAGGAACAAAA AACAAGAATCACGAATCTTATTGATGATTTCTTGAATGGCTTGAAGCAAATAATGAACAA AGAAGAAGAATTCATTGCTTCAAGATTGGATGGTATTGAAAAGCTAAGAATGGATCTAAG ATTCCTTAGAACATTTGTCTTGTTTGGGAATTCGACGAATTTGAATGGCTTTTATTTCAG GATGAGTACTCATAAATTCAAATTCAATGTACGTACTCAGTTCCTTTTCCATAGAGATGA GTTAATCCTAGAGAAATACCACATGGAACGTCTTGCCCCTCTGCTGCTTGAAGAGATAGG AAATTGTTTGAATTTGAAGAATGATTATGTAGCCACGGCGATAGACATAAAATTCTATGA ATACCTCATCAGACATCTCCATGATCTACCAAAGTACCGTTCTCAATTGCTTCACCACCA GATGACTGAATACAAGATTCTTCAGCAAGTATGCAGACATCTGATAGATTTCTATCCTAT CCTCGCGGCCAACAAAACAAGTACTGAATATCTATATCCTCGCTTCCAATTTACTACTCA TAGAGTAACACAATTCTGTTTTGATCTTTGGACTGGACATCATTATGTCTCTGAATGCTC TTCCAAGATCACTTCTCTACTCATCGACATAATCCCTCTTGAGTTGGAGGTTCTATACAT TTCTACTTGTAAGCTCATCAAAGAATCAACGTCAAAAGAACTAGAAGGATTTGTTAAGCA AATCCTAAAAACATCTCCAAGGATTCTTCAACATTATCTCATTCATCTCCAAGGACGCAT GGCCGGTGTAGTAGCCGTCAATTATGCTCCAACTCGAAGCATTAGTGTCATGATGGAGTT CCTATTGATCTTTCTCACTGATATGCCAAAGCGGTTTATCCATCGTGAAAAATTGAACGA TATGTTGGCACATGCTGGAATGCTTACCAGAAAAATATCTTTTCTGGTGAGCAAGCTGTT GGAGGAGATCTCTGAGGATAATATCAATGAAGCGGACTTTTCAGCTCCGGACTTTTTGCA AGAAATTGAACAAATGAAGGGAGATATCAGACACATTTTTTTAAAAGCTCCTGAGTCATC TCAACTTCGGTTTCCTATGGATGATGGTTTCCTCTTCATGAATCTTCTACTCAGACATTT AAATGATTTACTCATTTCCAATGCTTATTCAGTTTTTCTCATAAAAAAAGAAATTGGGAT GGTGAAAGAAAGCCTTGAATTCCTAATATCATCTTTCAGGAAAGTCAGGAAAACATTGGA TGAGAGTACTAGTGGAGTAGTTAAAGATTGTTGGGTGCGTGCTTTGGATGTGGCATATGA GGCAGAACATGTCATTAATTCCATTCTTGTCAGAGATAAAGCTCTCTCGCATCTCCTCTT CTCACTTCCGAGTGTCACTGATAAGATCAAACTTATCGTGGAACAAGTCACCAGGTTTCA GCTGGAGGATAAGAATGGGGATGGCCCCCTTGATGCAAAGTCTTCCTCCCAGCCAACTCA GTCAACTTCATCACCTTTTGTTGAGGTAACAGTAGGTCATGAGAAAGAAGAATCCCAGAT CATTGACCAGCTCCTTGATGAACATGAATCTGAGCTTGATGTCATTTCCATTGTCGGAAT GCCAGGACTCGGTAAAACTACTCTGGCCAACAAAGTGTATAAAAATACATTAGTTGCTAG TCATTTCCATGTCCGTGCTTGGTGCACTGTTTCCCAAAAGTATAACAAGTCAAAGGTGTT GCTGGAGATTCTTCAGCAAGTTACTGCCTCTGAAGAAGAAAAAAAAGTGGATGACCTGGC TGAAAAGCTACGAACAGCACTACTCGATAAAAGGTATCTCATCGTCTTGGATGATGTGTG GGATATTGCAACTGGGGAGATGTTAATAGCCTGTTTTCCTAAGGTTAAGAGAGGAAATAG AGTTATTTTAACTAGCCGAAGTAGTGAGGTAGGTTTGAAAGTTAAATGCCGTAGTGATCC TCTCAACCTTGAACTTTTAACACCTGAAGAAAGTTGGGATTTATTCGAAAAAAGGGTATT TGGAGATGAAGGAAGCTGCCCTGCTGAACTGTCAAAAGTTGGACACCAAATAGTTGAGAA ATGTAAGGGTCTTCCCTTGGCTATTGTTTTGATTGCTGGAGTAATTGTTAGAGGGAAGAA AAAGGAAAAGGATTTTTGGCTTAAGATACTACATAATCTGGATTCCTTTATTTCTACCAA CATCAATTTGGTTATGCAATTAAGTTATGACCATTTACCATGCCACCTGAAGCCGTTGCT GCTTTACTTTGCAACAACTCAAAAGAGCCAACGAACTCCAGTCTCTACATTGATGCAGTT GTGGATGGCCGAAGGGTTTGTGGATCATGATAGTTTAGAGGAAGTAACTCAAAGTTACTT GGATGCTCTAATTTCCAGTAGCCTGATAATGGTGGATCATATCCCCTCCGAGAGTATTTG GTGGATGCCTTCAATGATCAAGGTTTGCTATGTGCATGATGTTGTGCACGATTTTTGTTC AGAAAAAGCCAAAAAGCAGAAGTTTCTCAAGTTAATCAATTCAGGTGATACATTTCATGC TTCAGATTTCCTACACCATCGTCTAACCATTCATACTGACAACAGGAAACTCCACAAAAA ATGTGCTTTATTCAATTCTAATAAGTGCTTAGCTGTTAGTAAGCATCTCATATCTTTAAA AGTGAGTGGTCCACTTGATGACTTCAGATATATCTGTCACACAAGACCCTTTGGACTTGT TAGAGTGTTGCAACTGGATTTCATTGTTCTGAAAGGTTCTTTAATTGAAGAAATAGGGTC CTTATTTCATTTGAGGTTCTTAAGCATTCATGCTTTGGGAAAAGCTATCCCAGTATCGTG GTTGAACCTCCAGAATCTGGAAACTCTGTTCATCAATATACATTATTCCACCATGGTATT ACTGCCTAGAATATTGCAACTGTCAAAGCTGAAACATGTGAAAATTAACGTATGTTCTTT CTTTGAAGAGAAAGAGGATATCCAAAGTAGAATATTGGAATCTGGGAATTCTTCAAACTT GACAACTCTATCCGGAGTTGTTATCTCATATTCTGAAGGCATGAGTGATGATGCTCTGGA GAAGTTCCCAATTCTTCAGCACCTTGATTGCATCATCATGGAATCGCAGTATCCTCCTAC ACACGACTATTGGTTTCCCAAGCTTGATGTACTTAATAAACTCGAATCATTCATAGCAAG ACACAAGCGCAATGAATATCCCTCGTTAATCCGACAACCCAATGGATATCACTTCCCTAC AAGCTTGAAAGAGTTACGGTTGTCTGGTTTTCTCCTGAGACCTGATTTGTTGTCAGCAAT CGCAGCATTGCCTAAGCTTGATATTACTGAGTTAAACCACTGTAATTTCGTGGATAACAA ATGGGACGCAAGTGAGGACATCTATCTAAGTCTTAAGACTTTGATTTTGCGAGATGTCCA ATTATCAGAATGGCAAGTTGAGAGCGATACTTTTCCCAAGCTTGAGAAATTAATACTAAA ACTTTGTGCACTTTGCGAGATCCCTTGTGCATTTATAGATATAGACACTTTAAAGTCCAT TGATTTAAGTTATGTTGGGCGTGAGCTTGGAGATTCAGCCATTGAGATTAAGAAAAATGT AGCAGATTTCACAGGAGAGGACAGACTTGATGTCCACACATCACATTTGACTGGCAACCA ACACGAAGAAACAGAGGATGAAGATGAGAGTGATTGATGAAGTTGGACAAATCACAACAA TGAAGAACGAAACAACGCAACGCCTCCATCTGATTACTGGTTCCAATAAACAAACTTGTT ACTGCTTTTTCTCATTGCTGGTTCTGGACGTATTTTGATCTAATGTGTCGTGTGTTTTCT TTCCTGTTTTTTTGTTAGTTATGAATCTTATTTCGTCTGTAATCTCTCATATAAGATTCT AGTTTGTTTTTTTTTTAATTGGAAGGTTTCAATGCCAAATTGTGAATCAATATAGGTCCC ATTTGGCATGAAAAAGGCAACTAACTATCACTATTGATATGGACAG