Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc04g008110.3.1
CDS Infomation	Histidine kinase (AHRD V3.3 *** Q2ACB8_MAIZE)
Sequence	ATGGGTGAGAAGATGCAAAGCCACCATATGTTGAGTGTGAAGGGGAGTGAGCAATTTAAC TCAAAGAGAAAGCATAGATTTGTTCCTTCACAGGGTTATCTTCCAAAGCTTTTTGCTTTA TGGATTATCTGGTGTACATTTTTTAGCATTGCTTTGTACTTTTATATGGATGCTAATCAT AAGGAGAAAAGAAAAGAAGGGCTTGTGAGTATGTGTGATCAAAGGGCAAGGATGTTACAA GATCAATTCAGTGTTAGTGTGAATCATGTACATGCCCTTGCTATACTTGTATCAACTTTC CATTATGAGAAGAATCCATCAGCAATTGATCAGAGTACTTTTGCTGAGTACACTGCTAGA ACTGCCTTTGAGAGGCCACTATTAAGTGGGGTGGCATATGCAGAGAGAGTTTTAAACTCA GAAAGGGAAGAATTTGAGAGAGAACATGGATGGACTATTAAAACAATGGAAAAAGAGCCT TCACCAATTAGAGATGAGTATTCTCCAGTTATATTTTCACAAGAGACGGTTTCCTACATA GAATCACTTGATATGATGTCAGGAGAGGAGGATCGCGAAAACATCTTAAGAGCTAGGGCC AGTGGGAAGGCAGTTCTTACGAGCCCCTTCAGGCTTCTGGGTTCTCATCACCTTGGTGTT GTTTTGACATTCCCTGTTTACAGATCCAAGCTTCCGGAAAACCCGACGGAGCATGAACGG GTTGAAGCCACTGCAGGGTATCTTGGTGGAGCCTTCGATGTTGAGTCTCTCGTTGAGTGT CTACTTGGGCAACTTGCTGCAAATCATCCAATTATTGTAAATGTCTATGATGTTACAAAC TCTTCTGATCCTTTAATCATGTACGGACACCAGAACCCCAATGGTGATGCCTCACTAAAG CATGTGAGCAAGCTTGATTTTGGTGATCCATTTCGTAAGCATGAGATGATTTGTAGGTAT CTTTACGAAGCTCCTATATCTTGGGGTGCAGTGACCACTGCAGTTTTCATTTTTACCATC TTCCTCTTAATTGGCTACACGGGTTACAAATCTGCAAGCCACATTAATAAAGTAGAGGAT GATTTCCATAAAATGCAGGAGCTAAAGGTTCAAGCTGAAGCAGCTGATGTTGCCAAATCC CAGTTCTTGGCTACTGTTTCACATGAAATAAGAACTCCTATGAATGGAATCCTAGGAATG CTTGCTCTGCTCTTAGATACGGATCTCAGTTCAACTCAAAGAGATTATGCTCAGACTGCT CAAGATTGTGGGAAGTCACTGATAAGATTGATAAATGAAGTGCTTGATCGGGCCAAAATT GAAGCGGGCAAGTTAGAACTTGAGGCAGTTCCATTTGACCTTCGCTCTATACTGGATGAT GTTCTCTCTTTATTCTCTGATGATTCAAGGCGCAAAAGTCTTGAGTTGGCCGTCTTTGTT TCTGATAAAGTGCCTGAAATTGTTATGGGGGATCCAGGAAGATTCAGACAAGTGATAACA AATCTGGTGAACAACTCTGTCAAATTCACTTTACAAGGGCATATATTTGTTCAAGTTCAT CTGGTAGAACTAAACAAAGATGGTGACAAAAAGGATACCTGCTTGAATGGAGGAACTGAA AGTGTTATTTCTTCTAGTGCTTTTCATTTCAAGACCTTAAGTGGTTACGAAACTGCTGAT AGCCAGAACACTTGGAACACCTTCAAGCACATAATTGCTGACAATGGGTTGGACTATGAA TCTGCAACTAAGGTGGTGAATGATGATCTCTCTCGGGATGTCACTGTAATGGTTAGTGTT GAGGATACTGGAATCGGGATCCCTTTAAAAACACAAGAACGAGTTTTTACACCATTCATG CAGGCAGACAGTTCAACTTCTAGAAAGTACGGAGGAACTGGTATTGGGCTAAGCATTAGC AAGTGTCTCGTCGAGCTGATGGGCGGTCATATAAGTTTCATTAGCCGTCCCAAGATTGGA AGTACATTTTCTTTCAGTGTTAGCTTCCTAAGATGCGAAAAACATGCTCTTGGTGATCTG AAAAAATCTCATTCTGATGATTTGCCTACATCATTCAAAGGTCTAAATGCTATTATAGTC GATAAAAAGCCTGTAAGAGCTGCTGTAACTGGATACCATCTGAAGAGACTTGGTATTCGG GCAGAAGTTGTCAGTAGCATCAAGAGAGCTGCAGCCACTCTTGGGAGAAATGTTTCTGTT GTTTCCAATGAGAGGAAGCTGGACATAATTCTGGTCGAGAAGGACTTGTGGATATCTGAA GATGTTGACCTAAATTTACACTTTCCAAACATCAATCAAAATGGACACGTGTACAAGTTA CCTAAGATGATCCTTCTGGCGACTAATATCACCAACGCTGAACATGAAAAGGCTAAAGCA GTAGGTTTTTCAGTGATAATGAAACCTCTTAGAGCCAGTATGCTGGCTGCATGCCTTCAG CAGCTAATTGGAACTGGAAACAAGAGTCGAGGAAAAGATATGTCCAATAGATCTCCATCC CTTCGTGGCCTACTGTGTGGTATGAAAATTTTGGTGGTTGATGATAATAGAGTAAATCGC AGGGTTGCTGCTGGTGCACTCAAAAAGTTTGGGGCCGAGGTAGAGTGTGCTGAAAGTGGG AAAGCTGCTCTTGCATTGCTGCAGTTACCGCACAATTTTGATGCATGCTTTATGGATATT CAGATGCCAGAAATGGATGGGTTTGAGGCTACACGTCGAATTAGGGAACTAGAGAGCATT GCAAATGAACAACAGAATGGAGTGTCGAACTGTGATGGAGGTACAAAGAGGCGCAGGTGG CACATGCCGATATTGGCCATGACTGCTGATGTTATTCATGCCACATTAGAGAAATGCCTC AAGTGTGGGATGGATGGTTACGTCTCAAAACCATTCGAGGAAGAGAATCTTTATGAAGCT GTATCCAAGTTCTTTGAATCCAAGCCTAACTCGGACGAATAG

Peptide Sequence

PEP ID	Solyc04g008110.3.1
PEP Infomation	Histidine kinase (AHRD V3.3 *** Q2ACB8_MAIZE)
Sequence	MGEKMQSHHMLSVKGSEQFNSKRKHRFVPSQGYLPKLFALWIIWCTFFSIALYFYMDANH KEKRKEGLVSMCDQRARMLQDQFSVSVNHVHALAILVSTFHYEKNPSAIDQSTFAEYTAR TAFERPLLSGVAYAERVLNSEREEFEREHGWTIKTMEKEPSPIRDEYSPVIFSQETVSYI ESLDMMSGEEDRENILRARASGKAVLTSPFRLLGSHHLGVVLTFPVYRSKLPENPTEHER VEATAGYLGGAFDVESLVECLLGQLAANHPIIVNVYDVTNSSDPLIMYGHQNPNGDASLK HVSKLDFGDPFRKHEMICRYLYEAPISWGAVTTAVFIFTIFLLIGYTGYKSASHINKVED DFHKMQELKVQAEAADVAKSQFLATVSHEIRTPMNGILGMLALLLDTDLSSTQRDYAQTA QDCGKSLIRLINEVLDRAKIEAGKLELEAVPFDLRSILDDVLSLFSDDSRRKSLELAVFV SDKVPEIVMGDPGRFRQVITNLVNNSVKFTLQGHIFVQVHLVELNKDGDKKDTCLNGGTE SVISSSAFHFKTLSGYETADSQNTWNTFKHIIADNGLDYESATKVVNDDLSRDVTVMVSV EDTGIGIPLKTQERVFTPFMQADSSTSRKYGGTGIGLSISKCLVELMGGHISFISRPKIG STFSFSVSFLRCEKHALGDLKKSHSDDLPTSFKGLNAIIVDKKPVRAAVTGYHLKRLGIR AEVVSSIKRAAATLGRNVSVVSNERKLDIILVEKDLWISEDVDLNLHFPNINQNGHVYKL PKMILLATNITNAEHEKAKAVGFSVIMKPLRASMLAACLQQLIGTGNKSRGKDMSNRSPS LRGLLCGMKILVVDDNRVNRRVAAGALKKFGAEVECAESGKAALALLQLPHNFDACFMDI QMPEMDGFEATRRIRELESIANEQQNGVSNCDGGTKRRRWHMPILAMTADVIHATLEKCL KCGMDGYVSKPFEEENLYEAVSKFFESKPNSDE*

Transcript Sequence

Transcript ID	Solyc04g008110.3.1
Transcript Infomation	Histidine kinase (AHRD V3.3 *** Q2ACB8_MAIZE)
Sequence	TAGTAATTTTTTATGGTGTAAATATATAATAATGAAGAGAAAACAGTGAACATGCTCTTC ATTGTCTAGATTCTTCAACTTAACTCCATGCTTGAGAGCACATGATTGGAGTGATTTTTC ATTTTTTTATTCCAAAAACCCCATTGACAGACACTGTGTGAGGAGTTCTTGGAATTTGGG ATTATTTTTTTTTTCATCTTTTTAGGACTGCAGTCAAGCCATGCTTGTTGTTCCATGAGG GGGAAAAAAATTGGTTCTTTTTCTTGGGTTTCACTTCTTTCCATCCTCATGATAGTGTGA GGATTTGTTTGTTCATTTTCTTGGTGGGTTTTTTGCCTTTAGCACATTTTTAGTGAATTC TTTGCTTTTCCCTATGATTTAAAAAAATGGGGTTTTAAGAAATTACTTGTACTTTTGCAG AAAGCAATGATTTTTAGCTCATTTGTCTATATGGGGTTTCTTGTTTCTTTGTGGTTAGGA GAATTTTGAAGAATATTGAGGAGTATTTTTTTTGTTGTTGTGGTGATGGGTGAGAAGATG CAAAGCCACCATATGTTGAGTGTGAAGGGGAGTGAGCAATTTAACTCAAAGAGAAAGCAT AGATTTGTTCCTTCACAGGGTTATCTTCCAAAGCTTTTTGCTTTATGGATTATCTGGTGT ACATTTTTTAGCATTGCTTTGTACTTTTATATGGATGCTAATCATAAGGAGAAAAGAAAA GAAGGGCTTGTGAGTATGTGTGATCAAAGGGCAAGGATGTTACAAGATCAATTCAGTGTT AGTGTGAATCATGTACATGCCCTTGCTATACTTGTATCAACTTTCCATTATGAGAAGAAT CCATCAGCAATTGATCAGAGTACTTTTGCTGAGTACACTGCTAGAACTGCCTTTGAGAGG CCACTATTAAGTGGGGTGGCATATGCAGAGAGAGTTTTAAACTCAGAAAGGGAAGAATTT GAGAGAGAACATGGATGGACTATTAAAACAATGGAAAAAGAGCCTTCACCAATTAGAGAT GAGTATTCTCCAGTTATATTTTCACAAGAGACGGTTTCCTACATAGAATCACTTGATATG ATGTCAGGAGAGGAGGATCGCGAAAACATCTTAAGAGCTAGGGCCAGTGGGAAGGCAGTT CTTACGAGCCCCTTCAGGCTTCTGGGTTCTCATCACCTTGGTGTTGTTTTGACATTCCCT GTTTACAGATCCAAGCTTCCGGAAAACCCGACGGAGCATGAACGGGTTGAAGCCACTGCA GGGTATCTTGGTGGAGCCTTCGATGTTGAGTCTCTCGTTGAGTGTCTACTTGGGCAACTT GCTGCAAATCATCCAATTATTGTAAATGTCTATGATGTTACAAACTCTTCTGATCCTTTA ATCATGTACGGACACCAGAACCCCAATGGTGATGCCTCACTAAAGCATGTGAGCAAGCTT GATTTTGGTGATCCATTTCGTAAGCATGAGATGATTTGTAGGTATCTTTACGAAGCTCCT ATATCTTGGGGTGCAGTGACCACTGCAGTTTTCATTTTTACCATCTTCCTCTTAATTGGC TACACGGGTTACAAATCTGCAAGCCACATTAATAAAGTAGAGGATGATTTCCATAAAATG CAGGAGCTAAAGGTTCAAGCTGAAGCAGCTGATGTTGCCAAATCCCAGTTCTTGGCTACT GTTTCACATGAAATAAGAACTCCTATGAATGGAATCCTAGGAATGCTTGCTCTGCTCTTA GATACGGATCTCAGTTCAACTCAAAGAGATTATGCTCAGACTGCTCAAGATTGTGGGAAG TCACTGATAAGATTGATAAATGAAGTGCTTGATCGGGCCAAAATTGAAGCGGGCAAGTTA GAACTTGAGGCAGTTCCATTTGACCTTCGCTCTATACTGGATGATGTTCTCTCTTTATTC TCTGATGATTCAAGGCGCAAAAGTCTTGAGTTGGCCGTCTTTGTTTCTGATAAAGTGCCT GAAATTGTTATGGGGGATCCAGGAAGATTCAGACAAGTGATAACAAATCTGGTGAACAAC TCTGTCAAATTCACTTTACAAGGGCATATATTTGTTCAAGTTCATCTGGTAGAACTAAAC AAAGATGGTGACAAAAAGGATACCTGCTTGAATGGAGGAACTGAAAGTGTTATTTCTTCT AGTGCTTTTCATTTCAAGACCTTAAGTGGTTACGAAACTGCTGATAGCCAGAACACTTGG AACACCTTCAAGCACATAATTGCTGACAATGGGTTGGACTATGAATCTGCAACTAAGGTG GTGAATGATGATCTCTCTCGGGATGTCACTGTAATGGTTAGTGTTGAGGATACTGGAATC GGGATCCCTTTAAAAACACAAGAACGAGTTTTTACACCATTCATGCAGGCAGACAGTTCA ACTTCTAGAAAGTACGGAGGAACTGGTATTGGGCTAAGCATTAGCAAGTGTCTCGTCGAG CTGATGGGCGGTCATATAAGTTTCATTAGCCGTCCCAAGATTGGAAGTACATTTTCTTTC AGTGTTAGCTTCCTAAGATGCGAAAAACATGCTCTTGGTGATCTGAAAAAATCTCATTCT GATGATTTGCCTACATCATTCAAAGGTCTAAATGCTATTATAGTCGATAAAAAGCCTGTA AGAGCTGCTGTAACTGGATACCATCTGAAGAGACTTGGTATTCGGGCAGAAGTTGTCAGT AGCATCAAGAGAGCTGCAGCCACTCTTGGGAGAAATGTTTCTGTTGTTTCCAATGAGAGG AAGCTGGACATAATTCTGGTCGAGAAGGACTTGTGGATATCTGAAGATGTTGACCTAAAT TTACACTTTCCAAACATCAATCAAAATGGACACGTGTACAAGTTACCTAAGATGATCCTT CTGGCGACTAATATCACCAACGCTGAACATGAAAAGGCTAAAGCAGTAGGTTTTTCAGTG ATAATGAAACCTCTTAGAGCCAGTATGCTGGCTGCATGCCTTCAGCAGCTAATTGGAACT GGAAACAAGAGTCGAGGAAAAGATATGTCCAATAGATCTCCATCCCTTCGTGGCCTACTG TGTGGTATGAAAATTTTGGTGGTTGATGATAATAGAGTAAATCGCAGGGTTGCTGCTGGT GCACTCAAAAAGTTTGGGGCCGAGGTAGAGTGTGCTGAAAGTGGGAAAGCTGCTCTTGCA TTGCTGCAGTTACCGCACAATTTTGATGCATGCTTTATGGATATTCAGATGCCAGAAATG GATGGGTTTGAGGCTACACGTCGAATTAGGGAACTAGAGAGCATTGCAAATGAACAACAG AATGGAGTGTCGAACTGTGATGGAGGTACAAAGAGGCGCAGGTGGCACATGCCGATATTG GCCATGACTGCTGATGTTATTCATGCCACATTAGAGAAATGCCTCAAGTGTGGGATGGAT GGTTACGTCTCAAAACCATTCGAGGAAGAGAATCTTTATGAAGCTGTATCCAAGTTCTTT GAATCCAAGCCTAACTCGGACGAATAGCTAAGTACACCTATTCTACTGCTTTTGCTGCAC CTCTCGGCTGAAACGGACTACCAGCAAATTTTCAGCATCCTGCTGGTGCATATTCTTGTT TGACTTGTTCTAGTGTATGGACATGATTAGCCACATTTAGCAAGTGATTAACATCTAACC AGTTTAGACCTCTGACATGATTAGCTTCTTAAGTATATATTGTTGTATGTATACTGCAAA AGAGCTTCTATCCCTCTCTTGTATGTACATTTAAAAGGGGAGAAGAAGTCAAAGCTGTAT AATCT