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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g007820.3.1
CDS Infomation

Sn-1 protein (AHRD V3.3 *** Q42393_CAPAN)
Sequence

ATGAGCCGTAAAGGTAAGTTGATTGTTTCATTGGAAGTGAAGTGTGGAGGACATTCAATT
CATGATATTTTCCGTACTAATACCCAACATCTATCCACCATAAGCCCTAGTAGAGTCAAG
CATTTTGAGATCCATGAAGGTGAAAAAGGGGAAATTGGTTCGGTTGCTAGCTGGAAATAT
TACGAAGATGGAAAAGAAATGTTTGTTAAGACTGTGATTGAAGCCATCGATCCTCAGACG
AACTCAATCTCTTGGAATGTGATTGAAGGAAATTTATTAGATTTGTATAATTCCTTCACC
GTTATTACATCATCTGAACATGAATGGATTACATATACACTTGTGTACGAGAAGAAAACT
GAAGATACCCCAGAACCCCTCGCTCTCATGCATTATTGCGTTGGTGTGATCAAGGATACA
GAGAGTCACCTTCTCAAGAATTAG

Peptide Sequence

PEP ID

Solyc04g007820.3.1
PEP Infomation

Sn-1 protein (AHRD V3.3 *** Q42393_CAPAN)
Sequence

MSRKGKLIVSLEVKCGGHSIHDIFRTNTQHLSTISPSRVKHFEIHEGEKGEIGSVASWKY
YEDGKEMFVKTVIEAIDPQTNSISWNVIEGNLLDLYNSFTVITSSEHEWITYTLVYEKKT
EDTPEPLALMHYCVGVIKDTESHLLKN*

Transcript Sequence

Transcript ID

Solyc04g007820.3.1
Transcript Infomation

Sn-1 protein (AHRD V3.3 *** Q42393_CAPAN)
Sequence

GGTACAACTTTTATACATTTTCTTACCACTTGCCTATCGAAAACTCATTGCTATTACTAG
GAAAAATAAAATATGAGCCGTAAAGGTAAGTTGATTGTTTCATTGGAAGTGAAGTGTGGA
GGACATTCAATTCATGATATTTTCCGTACTAATACCCAACATCTATCCACCATAAGCCCT
AGTAGAGTCAAGCATTTTGAGATCCATGAAGGTGAAAAAGGGGAAATTGGTTCGGTTGCT
AGCTGGAAATATTACGAAGATGGAAAAGAAATGTTTGTTAAGACTGTGATTGAAGCCATC
GATCCTCAGACGAACTCAATCTCTTGGAATGTGATTGAAGGAAATTTATTAGATTTGTAT
AATTCCTTCACCGTTATTACATCATCTGAACATGAATGGATTACATATACACTTGTGTAC
GAGAAGAAAACTGAAGATACCCCAGAACCCCTCGCTCTCATGCATTATTGCGTTGGTGTG
ATCAAGGATACAGAGAGTCACCTTCTCAAGAATTAGAAAATCTATGATGTTCAACGGTCC
TTTACATAAGTATATCTATGTGTTTGTTCTTGTGTGATGAGTATTTGAAAATATTGGCTA
GCCCTAGCTAGCATGTAATAAATAATATCATGTTTGGAGTG