Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g007770.3.1
CDS Infomation

Sn-1 protein (AHRD V3.3 *** Q42393_CAPAN)
Sequence

ATGGGTGTGAAAGGCAAATTAATTGCTTTAGTGGAGGTAAAGTGTGGAGGACACCCGATT
CTTGATTTTTTTCACATCCATACCCATCATATACCTAATATAAGTCCTAATATTATCAAC
CATTTGGAGATACACGCAGGTGAAACTGTAAAAGTTGGTTCGATCGTTAGCTGCAATTAT
AACGAAGCTGGACAAAAGAAGTCTGCTAAGCAAGTAATTGAAGCCATCGATCTTGACAAG
AAATCAATCACTTGGAAAGTGATTGAAGGAGATGTGTTAGAGTCGTATAGTTCCTTTACT
GGTATCCTATCTTGTGAACACGAGTGGACAACATGGACAATTGAATACGAAAAGAAAACT
GAAGATATTCCAGAGCCTCTCATTCAATTGGGTCTTCTCCTTGACTTAACCAAGGATATA
GAGCGTCACCTTTTCAAGAAATAA

Peptide Sequence

PEP ID

Solyc04g007770.3.1
PEP Infomation

Sn-1 protein (AHRD V3.3 *** Q42393_CAPAN)
Sequence

MGVKGKLIALVEVKCGGHPILDFFHIHTHHIPNISPNIINHLEIHAGETVKVGSIVSCNY
NEAGQKKSAKQVIEAIDLDKKSITWKVIEGDVLESYSSFTGILSCEHEWTTWTIEYEKKT
EDIPEPLIQLGLLLDLTKDIERHLFKK*

Transcript Sequence

Transcript ID

Solyc04g007770.3.1
Transcript Infomation

Sn-1 protein (AHRD V3.3 *** Q42393_CAPAN)
Sequence

ACATTTTCTCACCACTTTCTTTCCAAAAATTATTGTAATTGAATAAAATATGGGTGTGAA
AGGCAAATTAATTGCTTTAGTGGAGGTAAAGTGTGGAGGACACCCGATTCTTGATTTTTT
TCACATCCATACCCATCATATACCTAATATAAGTCCTAATATTATCAACCATTTGGAGAT
ACACGCAGGTGAAACTGTAAAAGTTGGTTCGATCGTTAGCTGCAATTATAACGAAGCTGG
ACAAAAGAAGTCTGCTAAGCAAGTAATTGAAGCCATCGATCTTGACAAGAAATCAATCAC
TTGGAAAGTGATTGAAGGAGATGTGTTAGAGTCGTATAGTTCCTTTACTGGTATCCTATC
TTGTGAACACGAGTGGACAACATGGACAATTGAATACGAAAAGAAAACTGAAGATATTCC
AGAGCCTCTCATTCAATTGGGTCTTCTCCTTGACTTAACCAAGGATATAGAGCGTCACCT
TTTCAAGAAATAA