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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g007590.2.1
CDS Infomation

WAT1-related protein (AHRD V3.3 *** K4BNR6_SOLLC)
Sequence

ATGAGTTTCTTTGAGAAATGGAACGCGGTATCTGCAATGATTGTTGTTGAATTTGCTCTT
GCTATTGTAAATGCTCTGTTCAAAAAAGTACTTAATAGAGGAATGAATCAATTGGTGATA
ACTACCTATAGATTTTCAATTTCTACGATTGTCTTAACTCCTATCGCGTGTTTTTTAGAA
AGGAATTTTATATCGAATTTGACAGCTCGTGTTGTGTGTTCTCTGTTTTTCAGCGCGCTT
TTGGGAATGAGAAAAACATCGGTGTTTTTCAGGGGTACGCTTACTCAATACTTCTTCCTA
ATTGGACTTAAATACACCTCAGCAACATTTAGTTGCGCGTTCATCAATATGGTTCCTATC
AACACATTCATCATGTCATTGCTACTCGGGCAAGAGAACATAAACATGAAGTGCAAAAGT
GGGAGAGCTAAGGCATTAGGAACTTTATGTTGTCTTGGTGGAGCTTTGATACTAACTCTA
TACAAAGGAATGCCATTGATAGATCAATCAACACCAGAAGTTGAAGTGAACCACAATGTA
AAGAGTTGGATTGTTGGTTCATCATTTCTATTCGCGGGGAGCGTCGTTTGGTCTTCGTGG
TTTCTTATACAAGCTAGGATTGGGAAGGACTATCCTTATCAGTATTCAAGCACAGCAATA
ATGTCATTTCTTGGAGCCATTCAATCTGCAATATTGAGCTTGGTTATTGATAGAAACACA
TCTACATGGTTTCTTAAAGGAACTTTAGAGATATCAACTGTTATATATGCTGGAGTGGTG
GGATCAGGTTTATGCTATGTGGTCATGTCATGGTGTGTAAAGCAAAAGGGTGCAGTATTC
ACCTCTGCATTTAGTCCATTGATTCAAATTTTTGCTGCTGTGATTGACATCTCCATACTT
CATGAACAAATTCACCTTGGAAGCATTTTGGGGTCCATTTTGGTTATTATTGGCTTGTAT
ATTCTTCTATGGGGTAAAAGCAAAGACACACAGAATTTGAAGAATTCTCCAACAACAGAA
AAGAATGTGCAGCCTACACTTCCTGTTACTTCCAGCCCATCTCATACATAA

Peptide Sequence

PEP ID

Solyc04g007590.2.1
PEP Infomation

WAT1-related protein (AHRD V3.3 *** K4BNR6_SOLLC)
Sequence

MSFFEKWNAVSAMIVVEFALAIVNALFKKVLNRGMNQLVITTYRFSISTIVLTPIACFLE
RNFISNLTARVVCSLFFSALLGMRKTSVFFRGTLTQYFFLIGLKYTSATFSCAFINMVPI
NTFIMSLLLGQENINMKCKSGRAKALGTLCCLGGALILTLYKGMPLIDQSTPEVEVNHNV
KSWIVGSSFLFAGSVVWSSWFLIQARIGKDYPYQYSSTAIMSFLGAIQSAILSLVIDRNT
STWFLKGTLEISTVIYAGVVGSGLCYVVMSWCVKQKGAVFTSAFSPLIQIFAAVIDISIL
HEQIHLGSILGSILVIIGLYILLWGKSKDTQNLKNSPTTEKNVQPTLPVTSSPSHT*

Transcript Sequence

Transcript ID

Solyc04g007590.2.1
Transcript Infomation

WAT1-related protein (AHRD V3.3 *** K4BNR6_SOLLC)
Sequence

ATTTATGAGGTTAGTGAGCCTTCCATCCATCAATTGAATTGAACCCCAAACGTCCATACA
TATTCTCTCCTAACATAAAAAGTAAATGATGTGACTCTAGCCACTCTTGTACCATCAAAC
AACATGGAAAATAAAACATTTCCTATACCAAATCTTGATCTTGCTAACTTTTATGTGTTA
GTAATTAGTTGAAATTTGATTCCATCAGAGTATATATATACCGTAATGATAACACCACTT
GCACATTGTTCATATTAATCCAATAGATTAGACACATTGTTCTTCTCCCACTTCCTAAAT
ATATATAACTTATTAATACATGAAAGCAAAATAAAAACTAGTTCTTTGTTTCCAAAAGTA
GAAGGATAAGATGCTTAATGTTGTATCTGCATATAATTTCTGAGGTCATTAGCTAAATTT
TTCGTAGAATATTAACAAACAACGCGATTCGATCATTCAAAGTGGCTTAAAGAACATTAT
ATAAACATGGAAATATTGGCCTTGACATTACAAAAACAAACAAACAATGATGTGATGTAT
GAGTCTATGAGAATCATATCTTATATTCACTCTGTTTCGTAATGCTTTTATTATATATAC
GCTGAAGTTTCATTCATCAAATGTGGCTCTAAACTCTAAAAGTGAGCGAGTTTTTACATA
CTGGAAATATAGATATGAGTTTCTTTGAGAAATGGAACGCGGTATCTGCAATGATTGTTG
TTGAATTTGCTCTTGCTATTGTAAATGCTCTGTTCAAAAAAGTACTTAATAGAGGAATGA
ATCAATTGGTGATAACTACCTATAGATTTTCAATTTCTACGATTGTCTTAACTCCTATCG
CGTGTTTTTTAGAAAGGAATTTTATATCGAATTTGACAGCTCGTGTTGTGTGTTCTCTGT
TTTTCAGCGCGCTTTTGGGAATGAGAAAAACATCGGTGTTTTTCAGGGGTACGCTTACTC
AATACTTCTTCCTAATTGGACTTAAATACACCTCAGCAACATTTAGTTGCGCGTTCATCA
ATATGGTTCCTATCAACACATTCATCATGTCATTGCTACTCGGGCAAGAGAACATAAACA
TGAAGTGCAAAAGTGGGAGAGCTAAGGCATTAGGAACTTTATGTTGTCTTGGTGGAGCTT
TGATACTAACTCTATACAAAGGAATGCCATTGATAGATCAATCAACACCAGAAGTTGAAG
TGAACCACAATGTAAAGAGTTGGATTGTTGGTTCATCATTTCTATTCGCGGGGAGCGTCG
TTTGGTCTTCGTGGTTTCTTATACAAGCTAGGATTGGGAAGGACTATCCTTATCAGTATT
CAAGCACAGCAATAATGTCATTTCTTGGAGCCATTCAATCTGCAATATTGAGCTTGGTTA
TTGATAGAAACACATCTACATGGTTTCTTAAAGGAACTTTAGAGATATCAACTGTTATAT
ATGCTGGAGTGGTGGGATCAGGTTTATGCTATGTGGTCATGTCATGGTGTGTAAAGCAAA
AGGGTGCAGTATTCACCTCTGCATTTAGTCCATTGATTCAAATTTTTGCTGCTGTGATTG
ACATCTCCATACTTCATGAACAAATTCACCTTGGAAGCATTTTGGGGTCCATTTTGGTTA
TTATTGGCTTGTATATTCTTCTATGGGGTAAAAGCAAAGACACACAGAATTTGAAGAATT
CTCCAACAACAGAAAAGAATGTGCAGCCTACACTTCCTGTTACTTCCAGCCCATCTCATA
CATAAGGTTACATAATGCCAAAAGTGTATATCCCATAT