Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc04g007290.3.1
CDS Infomation	DUF639 family protein (AHRD V3.3 *** G7L0J4_MEDTR)
Sequence	ATGGAAAAGAAGCATCTTTCAACTATTGCTAACGACGTTATATGCAGATGTGCCAAGAAA TTGGACACATCTGTGGATGAATTAGTGCATGAGTTTGAGGCTGGATGTGATCCTAACATG GAGGGATATTCGAGGAAATTAGTCGAGTTTTGCTGCTCCAAGGCCCTCACTGATATGTGT AGTAAGTTGCAAGAAATGATTGATAATGATGATTTTATCCGATTCACGTTTGATATGATG TTGGCATGGGAAATGCCTAGTTCAACAGAAGAAGAGACACATGAAGAGTCGTTGGCGAAA GAAAAAGAAGAGAAAAAAGTTGTTGCTGAGATGAGTAAGGAACAAGATGACATCCCTTTG TTCTACTCTGATCTCTTGCCGTTCCTTGTTGATCATAAACCTAGTGTTGGAGAGCATGCT TTCTTGTGGCTAGCGACACTCGTAAATTTAGTAGGTGATTTTGTCAACGGAAGATGTACT TTCGAGACTCTGACAGCACCTACGGAAAATCGTCTGCATTTTCCTGCTTATAACATATTC TTGAAGGAGACTATAAAGTGCATAAAGCATTTACAGAAACAAGCAACTCCAACGGGTGTG GAAATGAGAGATGACGAGTTTATAATACACGTAGAAGGAACTGCAAGTTCACAAAGAATA GTGCGCCATATTGGAGGGACAAGTTGGCCTGGTAGGCTGACACTAACAAACTATGCCCTG TACTTCGAGGAATCCGGAGTCATTTCTTATAAAGACGCTCTTACGCTCAATCTTTCGGAA GATTTCGAGCAGAGTATCAAACCTGCTGCTACAGGTCCGTGGGGTGCTCCGCTCTTTGAC AAGGCTATAGTTTATAGTTCTTCTGAATTGGAAGAAGCCGTTCTCTTGGAATTTCCCGAA ATGACAAGCTCAACAAGGCGCAACCATTGGCTTGCTCTTATAAAGGAGATTATACTTTTG CATCGGTTCCTACGGAAGTTTAAGGTTGATTCACCTTCAGGATCATGGGAGATGCACGCG AGGACAATACTAGGAATTATAAGGCTTCATGCAGCTAGAGAAATGCTTAGAATCTCTCCA CCAGTTCCCAAGAAGTTCTTGATTTTCGATTTGCTAGACGAGTTACCAAAAGGAGATTAT GTACTTGAAGAGCTTGCTGGGAGTCTGAAGAAAGTAGACGTTGGACATCCTTGTAGTGCT AGCTCGATCTTGAGAAGCCTGAATATCTCCCTGATGCCTGTTCCAGCCGAAGTGGTCAAA GAAATCAATGATAGCAACCGTATCCCTGGACAAACCGACAGTGTCTCGTCATTGGGGAAT GCTATCGATCAAGCGAGAGAGGAAGCAAAGGAGATTGAAAAGGCCAAAGCTACTGTTGAG GAGCTGAAAGGGGAAGGGGTGGGGAATAGTGTCCAGGTTCTTATGGGTCTTATCAAACAG CTCGGGAGGTTAATGCCTTATATTCAAGAGGTATTAACATGGGAACGACCTCTATGCACC TCCATTTTTGTCTTGACGACACTCGTAGTCATATATGCAGAGTGTATTGGCAAAGCAATA GCAGCTCTCTTATTGGGAACAGTTGCAACGATGATATGGACAAGACGAAGAAGGGATGAA CTAGATAAGGCAAGTAAAATAGTTATCTACACTGGATCTGATCACACGACGATGGAAAAC ATAGTGTCAGCACAACATGGACTAAGAAATGTCTACGACTTGATTCAAAGCATGAACATA GTATTACTGAAAATCTGGTCCATATTTGTTTCAAAGGCTCCAAAGCATGCAGATTTAGTA ATGGCGGTAATGGTTGTTGCTGCAGTGATATTAGTTGTGGTTCCGTTCAAGTTCATCGTT ATGGCTTTGACGTTGTGCATCTTTGTACAGACTTCAAAGATTGGGAAATACATGGAAAAT GAGAAAGTAAATCGGAGAATAAAAGAATGGTGGGACTCTATACCTGTCGTCCCTGTCGAA ATTCTGGGGAAAAATGCTGATTCGTAG

Peptide Sequence

PEP ID	Solyc04g007290.3.1
PEP Infomation	DUF639 family protein (AHRD V3.3 *** G7L0J4_MEDTR)
Sequence	MEKKHLSTIANDVICRCAKKLDTSVDELVHEFEAGCDPNMEGYSRKLVEFCCSKALTDMC SKLQEMIDNDDFIRFTFDMMLAWEMPSSTEEETHEESLAKEKEEKKVVAEMSKEQDDIPL FYSDLLPFLVDHKPSVGEHAFLWLATLVNLVGDFVNGRCTFETLTAPTENRLHFPAYNIF LKETIKCIKHLQKQATPTGVEMRDDEFIIHVEGTASSQRIVRHIGGTSWPGRLTLTNYAL YFEESGVISYKDALTLNLSEDFEQSIKPAATGPWGAPLFDKAIVYSSSELEEAVLLEFPE MTSSTRRNHWLALIKEIILLHRFLRKFKVDSPSGSWEMHARTILGIIRLHAAREMLRISP PVPKKFLIFDLLDELPKGDYVLEELAGSLKKVDVGHPCSASSILRSLNISLMPVPAEVVK EINDSNRIPGQTDSVSSLGNAIDQAREEAKEIEKAKATVEELKGEGVGNSVQVLMGLIKQ LGRLMPYIQEVLTWERPLCTSIFVLTTLVVIYAECIGKAIAALLLGTVATMIWTRRRRDE LDKASKIVIYTGSDHTTMENIVSAQHGLRNVYDLIQSMNIVLLKIWSIFVSKAPKHADLV MAVMVVAAVILVVVPFKFIVMALTLCIFVQTSKIGKYMENEKVNRRIKEWWDSIPVVPVE ILGKNADS*

Transcript Sequence

Transcript ID	Solyc04g007290.3.1
Transcript Infomation	DUF639 family protein (AHRD V3.3 *** G7L0J4_MEDTR)
Sequence	TGAAATATTGTGTAAAGACAAATTAAAATACATTTATAAATTTCTAAACCAAAAAAAAAA ATGTCTTTTAAAACTCAATAGCCATAGAAGTTAATAATATGGAAAAGAAGCATCTTTCAA CTATTGCTAACGACGTTATATGCAGATGTGCCAAGAAATTGGACACATCTGTGGATGAAT TAGTGCATGAGTTTGAGGCTGGATGTGATCCTAACATGGAGGGATATTCGAGGAAATTAG TCGAGTTTTGCTGCTCCAAGGCCCTCACTGATATGTGTAGTAAGTTGCAAGAAATGATTG ATAATGATGATTTTATCCGATTCACGTTTGATATGATGTTGGCATGGGAAATGCCTAGTT CAACAGAAGAAGAGACACATGAAGAGTCGTTGGCGAAAGAAAAAGAAGAGAAAAAAGTTG TTGCTGAGATGAGTAAGGAACAAGATGACATCCCTTTGTTCTACTCTGATCTCTTGCCGT TCCTTGTTGATCATAAACCTAGTGTTGGAGAGCATGCTTTCTTGTGGCTAGCGACACTCG TAAATTTAGTAGGTGATTTTGTCAACGGAAGATGTACTTTCGAGACTCTGACAGCACCTA CGGAAAATCGTCTGCATTTTCCTGCTTATAACATATTCTTGAAGGAGACTATAAAGTGCA TAAAGCATTTACAGAAACAAGCAACTCCAACGGGTGTGGAAATGAGAGATGACGAGTTTA TAATACACGTAGAAGGAACTGCAAGTTCACAAAGAATAGTGCGCCATATTGGAGGGACAA GTTGGCCTGGTAGGCTGACACTAACAAACTATGCCCTGTACTTCGAGGAATCCGGAGTCA TTTCTTATAAAGACGCTCTTACGCTCAATCTTTCGGAAGATTTCGAGCAGAGTATCAAAC CTGCTGCTACAGGTCCGTGGGGTGCTCCGCTCTTTGACAAGGCTATAGTTTATAGTTCTT CTGAATTGGAAGAAGCCGTTCTCTTGGAATTTCCCGAAATGACAAGCTCAACAAGGCGCA ACCATTGGCTTGCTCTTATAAAGGAGATTATACTTTTGCATCGGTTCCTACGGAAGTTTA AGGTTGATTCACCTTCAGGATCATGGGAGATGCACGCGAGGACAATACTAGGAATTATAA GGCTTCATGCAGCTAGAGAAATGCTTAGAATCTCTCCACCAGTTCCCAAGAAGTTCTTGA TTTTCGATTTGCTAGACGAGTTACCAAAAGGAGATTATGTACTTGAAGAGCTTGCTGGGA GTCTGAAGAAAGTAGACGTTGGACATCCTTGTAGTGCTAGCTCGATCTTGAGAAGCCTGA ATATCTCCCTGATGCCTGTTCCAGCCGAAGTGGTCAAAGAAATCAATGATAGCAACCGTA TCCCTGGACAAACCGACAGTGTCTCGTCATTGGGGAATGCTATCGATCAAGCGAGAGAGG AAGCAAAGGAGATTGAAAAGGCCAAAGCTACTGTTGAGGAGCTGAAAGGGGAAGGGGTGG GGAATAGTGTCCAGGTTCTTATGGGTCTTATCAAACAGCTCGGGAGGTTAATGCCTTATA TTCAAGAGGTATTAACATGGGAACGACCTCTATGCACCTCCATTTTTGTCTTGACGACAC TCGTAGTCATATATGCAGAGTGTATTGGCAAAGCAATAGCAGCTCTCTTATTGGGAACAG TTGCAACGATGATATGGACAAGACGAAGAAGGGATGAACTAGATAAGGCAAGTAAAATAG TTATCTACACTGGATCTGATCACACGACGATGGAAAACATAGTGTCAGCACAACATGGAC TAAGAAATGTCTACGACTTGATTCAAAGCATGAACATAGTATTACTGAAAATCTGGTCCA TATTTGTTTCAAAGGCTCCAAAGCATGCAGATTTAGTAATGGCGGTAATGGTTGTTGCTG CAGTGATATTAGTTGTGGTTCCGTTCAAGTTCATCGTTATGGCTTTGACGTTGTGCATCT TTGTACAGACTTCAAAGATTGGGAAATACATGGAAAATGAGAAAGTAAATCGGAGAATAA AAGAATGGTGGGACTCTATACCTGTCGTCCCTGTCGAAATTCTGGGGAAAAATGCTGATT CGTAGTACTTGGAAGTTTACATCTTGTATTGAAAACCAGAAATATACTGTAACTTGGCAT CTCCTTGTTTGAGATTTTTAGCATATATATATATAGATAGATCATTGCATACTGCTTGCG AAGCACTTGCCCAGAAATAGAAATATGTCAAAATATATGCTATGGTGTTCTTTAAGGTTC AACCACATTTGCACTCAGCCTGTGTAACTGGTTAAAAGAAAGATTCTCAATTTATATTCC AGGTGAACCATTTTGTCCTAAATTAAGCATATAAAAAGATGAGCGTAGATTCCTCAATTC AAAATCTCCGAATGAAAAAAACTGCACTTCTTGAAACAACAGATATAATGACATAAAAAG ACCAGAAAAAGCAAACAAATACAACGGGGAAAAAAACGAGATCCACAACAAAAACTGAAA AAAAAGGGGGGAACTACACAACCCATATTCCACAAATGAGC