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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g007230.3.1
CDS Infomation

Regulator of Vps4 activity in the MVB pathway protein (AHRD V3.3 *** A0A061ED43_THECC)
Sequence

ATGTCGATGCTGAATCAACTCTTCAACAGGGGACTTCAAGGCTCAAAGTGCAAGACGTGC
TTGACCTTGGCAATCTCACGAATCAAATTACTACAAAACAAGAGAGATGCACAGCTCAGA
CTTATGCGCAAGGAGATAGCCCAATTTCTGCAAACAGGCCAGGAAGCCATAGCTCGAATT
AGGGTTGAGCATATTATACGCGAGCAAAATGTATGGGCTGCCTATGAGATTTTGGAGTTG
TTCTGCGAGTTTGTTTTTGCCCGTGTCCCTATCCTTGAAAGCCAAAAGGAATGCCCCTCA
GAGTTGCGGGAAGCTGTTGCAAGTATAATCTTTGCAGCTCCAAGATGTTCAGATTTGCCA
GATCTATTGCATGTCAGGAATCTATTTGCAGCTAAATACGGAAAGGAATTTATAGCCGCA
GCATCTGAGCTTCGGCCTGATACAAGTGTTAACCGTACAATTGTAGAGAAACTTTCAGTT
GGTGCTCCATCAGCTGAACTAAAGCTCAATGTACTGAAGGAAATTGCAAAAGAGTACAAC
GTGGAATGGGATTCTTCTTACACAGAAGCAGAATTAAGTAAAAACCCGGAGGACCTTCTG
AATGGACCAAAGCAAATTGCTGCACCTGTTCGGGCATCTCTAGAACCAAATACTCGTGGT
CATCCACCAACTTCTGAAAATCCTGTGACGTCTCCAAATGGCAATCGAGGAGCTAAGAGT
CTTGATTCTCCAACCTCTGTTACTAAAGCACCTCTATGGCCCGCCAATATAGATAAACCA
TCACATAGCGACAGCACTTTGGCTGATGCAGTCGATATAAAAAAGGATACAAGACCAGAA
ACATCAGATGTATTGGAGAGAGCCCGTTCTGCTATTTCTGCTGCAGAGCGTGCATCTGCT
GCTGCACGACTTGCTGCAGATTTGGTTAATGTCAAGTTCAGTTCTTCAAAGATAGAGGAA
GACAAGAGTTAA

Peptide Sequence

PEP ID

Solyc04g007230.3.1
PEP Infomation

Regulator of Vps4 activity in the MVB pathway protein (AHRD V3.3 *** A0A061ED43_THECC)
Sequence

MSMLNQLFNRGLQGSKCKTCLTLAISRIKLLQNKRDAQLRLMRKEIAQFLQTGQEAIARI
RVEHIIREQNVWAAYEILELFCEFVFARVPILESQKECPSELREAVASIIFAAPRCSDLP
DLLHVRNLFAAKYGKEFIAAASELRPDTSVNRTIVEKLSVGAPSAELKLNVLKEIAKEYN
VEWDSSYTEAELSKNPEDLLNGPKQIAAPVRASLEPNTRGHPPTSENPVTSPNGNRGAKS
LDSPTSVTKAPLWPANIDKPSHSDSTLADAVDIKKDTRPETSDVLERARSAISAAERASA
AARLAADLVNVKFSSSKIEEDKS*

Transcript Sequence

Transcript ID

Solyc04g007230.3.1
Transcript Infomation

Regulator of Vps4 activity in the MVB pathway protein (AHRD V3.3 *** A0A061ED43_THECC)
Sequence

TTTTTATATTAGTTATATTTTAAACCCGAGACCTGAAATTTGACTTTGTTTCCATCGTTT
ACATTAGAGACATTGAAATTAACAGCGCAGATCAATGATCACCAATTTGTATCAAAATTC
TTAGCAAAATTGTGAATTGCGATATATATTTAAGCAATTGCCACAATTTTGTGGAGTTCT
TCGACTCATGTCGATGCTGAATCAACTCTTCAACAGGGGACTTCAAGGCTCAAAGTGCAA
GACGTGCTTGACCTTGGCAATCTCACGAATCAAATTACTACAAAACAAGAGAGATGCACA
GCTCAGACTTATGCGCAAGGAGATAGCCCAATTTCTGCAAACAGGCCAGGAAGCCATAGC
TCGAATTAGGGTTGAGCATATTATACGCGAGCAAAATGTATGGGCTGCCTATGAGATTTT
GGAGTTGTTCTGCGAGTTTGTTTTTGCCCGTGTCCCTATCCTTGAAAGCCAAAAGGAATG
CCCCTCAGAGTTGCGGGAAGCTGTTGCAAGTATAATCTTTGCAGCTCCAAGATGTTCAGA
TTTGCCAGATCTATTGCATGTCAGGAATCTATTTGCAGCTAAATACGGAAAGGAATTTAT
AGCCGCAGCATCTGAGCTTCGGCCTGATACAAGTGTTAACCGTACAATTGTAGAGAAACT
TTCAGTTGGTGCTCCATCAGCTGAACTAAAGCTCAATGTACTGAAGGAAATTGCAAAAGA
GTACAACGTGGAATGGGATTCTTCTTACACAGAAGCAGAATTAAGTAAAAACCCGGAGGA
CCTTCTGAATGGACCAAAGCAAATTGCTGCACCTGTTCGGGCATCTCTAGAACCAAATAC
TCGTGGTCATCCACCAACTTCTGAAAATCCTGTGACGTCTCCAAATGGCAATCGAGGAGC
TAAGAGTCTTGATTCTCCAACCTCTGTTACTAAAGCACCTCTATGGCCCGCCAATATAGA
TAAACCATCACATAGCGACAGCACTTTGGCTGATGCAGTCGATATAAAAAAGGATACAAG
ACCAGAAACATCAGATGTATTGGAGAGAGCCCGTTCTGCTATTTCTGCTGCAGAGCGTGC
ATCTGCTGCTGCACGACTTGCTGCAGATTTGGTTAATGTCAAGTTCAGTTCTTCAAAGAT
AGAGGAAGACAAGAGTTAAGTTAAATCATTATTTCGAAATTCAATCTGTCTGATGCCTCT
TTTCTTATGTGTGTGTGTGAGAGAGAGCAACAGGATCCTAACTTTATCGTCGTGGCAGCT
TATGTCGATGAGACACTGTTGTGAAGAAAAAGGCACACATTAAGTTTAACATATAATGCT
GGTGGTTTTCTTATTAGTAAGTGACCAGCTTTGAGAACAATAATGTTTGTAAAATATGTA
TTTTTGGCTGCACATAATTATCTCTCTCAATTTCTGGATTAGATGTAGCAAATCATCTCT
ATTGCCAACTCTTTTTTCTTTTTCTTTCATAGTGGGGCTTTAAGTACATGTGATGGAATT
TGCAGTTATTTCCAACTTGACATCTTATAATTTTGTCATGTCCCAATTAACAAACAAATG
CTTGGTTTAGTGCTTGTCACAAAATCATTTCCAACTTGATATCTTATCTTATTTGCCATA
ATTTTTCATGTCGCAATCAAGTAAGAGGACTTATCAACATGCATGTTTAGATATAACCTT
CCTTCCTTTAGGATCGAAAGAGCCAAATCAACCTTGATGTCATTGTAAATTTTGTAGTCT
CTTCTCAATAATCATGTAAAAAAGTTTTGATATGTCAGACTCAATATGTAATTTTTCGCA
CATCAATAATCAATAGTGTCAAATTAAGTACATTTAACCAAAAAACAAAGTGTTTAATTT
AGTGGTCAATAGTGATATAACTAATCACTAACCATAAAGTTGAAAAGCATTGAGCTCAAA
ACCATCTCCCTTCCTTTAGTTTTCTAAAAGACTGTTTAAACGATGAACTATGATAATTTT
TAGGTCAAAAAAAGATAAAAAGAGACGGAGCTAGAAGTTGACGTACAAGGTTCCATAGAA
CTTCACACGAGGTGAGGAATATTTCACCAAAACATATGTTGGCCACAAAATTTGATGCTC
TTGTCACTTTAGAAAAGGAATGTATGTAAAGCAAAAATTCCAACAAATTTGTATTATTAT
TTGTTCTACTATATATTTATTCCAAAAAATATATAATTCCTTTGCCTTTTATTATTTTTC
CCCATACCTTTGGACTCTTGTGACAATTTGTTGATTTATTCAAATTTGGACGTGGTCCAA
ATTTTAAGTATTGTAACCTTTCAAATATTCAGAAGACAATAGATCAACTTTTTGTCAAGA
CAGAATTAGTCTTATGTAACTTTCACATCTTTCATTTTCTATTGTCTTGATACTCATCAT
ATTTACTTAGGTTACCAATTGATGTAACCTCTCTAAGAGTAGCAAGTGTCAATCTTATAG
CGAGGGACGGAGCTAGAAACCGATATATATATGAGTTTTATTGAATTTATTATAGCTTTA
GTTTAAATTTTATAATTGTATTAAAAAGAATTGCAATATGTATAGAAAATAATAAATTTA
GTTCTCAATTACTAATATTTGTTATTGTTGTGCTAG