Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g007210.3.1
CDS Infomation

CONSTANS-like zinc finger protein (AHRD V3.3 *** I1LEW9_SOYBN)
Sequence

ATGAGTTCAGAGAAAAAATTAGCTAACGCGATGGGCGCGAAAACGGCTAGGGCTTGCGAC
AATTGCATAAGGAAAAGGGCAAGATGGTATTGTGCAGCCGATGATGCTTTCTTGTGTCAA
TCTTGTGATTCTTCCGTCCATTCGGCCAATCCTTTGGCTCGTAGACATGAAAGGGTTCGT
CTTAAAACATCATCTTTCAAATCGTCAGATGACTTTCCTAATTTGGAAAGTACAGTCTCA
GGGTTAGGGTCAGGGTCAGGGTCAGGATCAGACTCAATTCCATCATGGCACTGTGGATTT
ACTAGAAAAGCACGAACACCTAGGTATGGTAATAAACATGCAAAAAGAGTTAAATCCACG
GAGGAGGAAGAGGAGGAGGAGGAAATGAAAAACCCTATTCAACTCGTTGTCCCAGAGATA
TTAAGTGATGAAAATTCACACGATGAAAATGAAGAAGAGCAACTCTTGTATCGCGTACCT
ATTTTTGATCCCTTTATGGCGGATGGCTCTAATTATGGTAACGAATATTCTTCTAATAAA
GTTGATTTTAATCAAGATATGAATACGTTTCAAGGTCTGCTAGCTCCATCAGAGATGGAG
CTAGCAGAATTTGCCGCGGATGTGGTAAGTTTATTAGGGAAAGGACTTGATGATGAAGAG
TCATTTAATTACATGGAAGGTTTAGGTTTTTTGGAAAAACATGATGAGAAATTAGTGAAG
GTTGAAGATGAAGGAGAAGTGGGATTTGTGAATATGATTAGTACTAATAATCAAGTTGAT
TATTCAGAATTTGATATGGTTGGTGAGACATTTGAGCTCAAGTTTGATTATGATTCACAA
GTTATTAATAACTTAGATGAAGATAACAAAAAGGTTGAATTTTTGGAGATAAATTATGAT
AGTGGGAAAAATAATAATAAGATTATGTTAAATCTTGATTATGAAAGTGTTTTAAAATCT
TGGGGTGACAAAAGATTTCCGTGGACAACGGGCGTGCGGCCCGAAGTAGATTTCAATGAC
TGTTGGCCAGTGTGCATGGGAAATTGTGGGAAAATTCACTCATATGGAGACATAGCAATA
ATGAATGGACATGGAGGAGGAGTAGTGGATGAAGGAAGAGAAGCAAGAGTATTAAGGTAC
AAGGAAAAGCGACGAACAAGGTTGTTTTCCAAGAAAATAAGATACGAGGTTAGGAAATTG
AACGCTGAAAAAAGGCCTCGAATGAAAGGAAGATTCGTCAAGAGGACCAATTTTGCACCA
ACCCCTTTTCCTTCACTTAATAAATAA

Peptide Sequence

PEP ID

Solyc04g007210.3.1
PEP Infomation

CONSTANS-like zinc finger protein (AHRD V3.3 *** I1LEW9_SOYBN)
Sequence

MSSEKKLANAMGAKTARACDNCIRKRARWYCAADDAFLCQSCDSSVHSANPLARRHERVR
LKTSSFKSSDDFPNLESTVSGLGSGSGSGSDSIPSWHCGFTRKARTPRYGNKHAKRVKST
EEEEEEEEMKNPIQLVVPEILSDENSHDENEEEQLLYRVPIFDPFMADGSNYGNEYSSNK
VDFNQDMNTFQGLLAPSEMELAEFAADVVSLLGKGLDDEESFNYMEGLGFLEKHDEKLVK
VEDEGEVGFVNMISTNNQVDYSEFDMVGETFELKFDYDSQVINNLDEDNKKVEFLEINYD
SGKNNNKIMLNLDYESVLKSWGDKRFPWTTGVRPEVDFNDCWPVCMGNCGKIHSYGDIAI
MNGHGGGVVDEGREARVLRYKEKRRTRLFSKKIRYEVRKLNAEKRPRMKGRFVKRTNFAP
TPFPSLNK*

Transcript Sequence

Transcript ID

Solyc04g007210.3.1
Transcript Infomation

CONSTANS-like zinc finger protein (AHRD V3.3 *** I1LEW9_SOYBN)
Sequence

CATTTACAAAAATGTTGCCAAAAGTCACATCAAAATATAAGGCATATAATCTTGATTTTC
TCTTTTCCCATTTGGAATCAAACAAGTGGAAGAATTGGCCAGGACAGCAACAAAAGAGTT
TTATGAACTTTTAGACAGGCATATAAATTGAAAGGAAGCAATCTTACAAAGAAATGTCCA
CTTCAAATTTAGTGAGCATAGACATTGACATTTTTTTCTTTTCATTTTTATAAAGATATG
ATCAATTTAAGACTAATTTTATCAGTGGGTCCCACTTGAAATCCATTTGATAAGAGTTGT
AGCCAATCAGAAAAAAGAAACCAGGATGAACTTTTAAAAACTAGCCAATTAGAAAATAGA
TAAGGCCACTATATGCCCTGGTCCCAAATGTGGAGTCCCATTCCATGAGAAATTGAAAAA
AAAATAGAGTTTATTAACTAATTATGAACTTTGATGTTGTATATTTCTATTATATTATTG
ATTTACTTAAAATATTTATACAATTATAGAATTATTGAGTATGATATGTAAAAATTAATT
AACATAGAAAGCAATCGATTAAATTACACTGATAATATAAAATTTACTTAACTGATATTA
ATGCATATAACGTTGTCGATTCAACTTATATACAAATATATTTATTTATAATTATTTTAT
AAAATTGTGCTATTATTTTTTTTTTATACTAGAATAAATTTAAACTCATATATGTAGACA
ATGCATTAATTTTGTGGGTCACTCTCCTCCTATATTTCATTCAAATAATTGCACTTTTCC
CTATCCCTTTTGAATTCTCTTCAATTGCCTTTCTATACATATAAAGAATAAACTCAAACA
TATTTCACTACTTTCCTCTCCTTCAACTGTTGTTCAATTCCTATATTTTCAAAGATCCAA
ATATTTTGAAAAATATATGCATCAATTATGAGTTCAGAGAAAAAATTAGCTAACGCGATG
GGCGCGAAAACGGCTAGGGCTTGCGACAATTGCATAAGGAAAAGGGCAAGATGGTATTGT
GCAGCCGATGATGCTTTCTTGTGTCAATCTTGTGATTCTTCCGTCCATTCGGCCAATCCT
TTGGCTCGTAGACATGAAAGGGTTCGTCTTAAAACATCATCTTTCAAATCGTCAGATGAC
TTTCCTAATTTGGAAAGTACAGTCTCAGGGTTAGGGTCAGGGTCAGGGTCAGGATCAGAC
TCAATTCCATCATGGCACTGTGGATTTACTAGAAAAGCACGAACACCTAGGTATGGTAAT
AAACATGCAAAAAGAGTTAAATCCACGGAGGAGGAAGAGGAGGAGGAGGAAATGAAAAAC
CCTATTCAACTCGTTGTCCCAGAGATATTAAGTGATGAAAATTCACACGATGAAAATGAA
GAAGAGCAACTCTTGTATCGCGTACCTATTTTTGATCCCTTTATGGCGGATGGCTCTAAT
TATGGTAACGAATATTCTTCTAATAAAGTTGATTTTAATCAAGATATGAATACGTTTCAA
GGTCTGCTAGCTCCATCAGAGATGGAGCTAGCAGAATTTGCCGCGGATGTGGTAAGTTTA
TTAGGGAAAGGACTTGATGATGAAGAGTCATTTAATTACATGGAAGGTTTAGGTTTTTTG
GAAAAACATGATGAGAAATTAGTGAAGGTTGAAGATGAAGGAGAAGTGGGATTTGTGAAT
ATGATTAGTACTAATAATCAAGTTGATTATTCAGAATTTGATATGGTTGGTGAGACATTT
GAGCTCAAGTTTGATTATGATTCACAAGTTATTAATAACTTAGATGAAGATAACAAAAAG
GTTGAATTTTTGGAGATAAATTATGATAGTGGGAAAAATAATAATAAGATTATGTTAAAT
CTTGATTATGAAAGTGTTTTAAAATCTTGGGGTGACAAAAGATTTCCGTGGACAACGGGC
GTGCGGCCCGAAGTAGATTTCAATGACTGTTGGCCAGTGTGCATGGGAAATTGTGGGAAA
ATTCACTCATATGGAGACATAGCAATAATGAATGGACATGGAGGAGGAGTAGTGGATGAA
GGAAGAGAAGCAAGAGTATTAAGGTACAAGGAAAAGCGACGAACAAGGTTGTTTTCCAAG
AAAATAAGATACGAGGTTAGGAAATTGAACGCTGAAAAAAGGCCTCGAATGAAAGGAAGA
TTCGTCAAGAGGACCAATTTTGCACCAACCCCTTTTCCTTCACTTAATAAATAAGTGAAG
TTTAAAGCAAAGGCAAGTTTAGAATCGTTTTTGTGAGTTCAACTGAACTCATTGCTTCAA
GCTAGAACGATGTATAGTATGTATGCAAACATTTTCTACATAGATGACGTTCATTCTGGG
TTTACCGACTCTAAATACTATATGTTTGCAAGAATCAGGTTTTTATGTGCTACTTTTTAT
ATAGTACAAGTAAACTTGAGCTTTCTTTCCTAGATGTATTATGTATATAGAGATTACAAT
ATAATGTCATTTTTATGAAATTTTTTTTGTGTCATTTTGACCTAGGACTTTTGCCATCTA
TAATCTCAAATTGTTGGATACTCAGGAAGGAGATATATATATATATATAGAACACAATAT
CTATCTCCCTAGTTTTTGTTCCATCTTCTAAGAAGATGTTTCCTTTTGGATTATCAAAGA
ATGATGAAGATATGTACTCTGTTTGTTCGTATTTATTTGTCTATTTGACTTGACACACTA
TAAATAA