Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g005860.3.1
CDS Infomation

CW14 protein (DUF1336) (AHRD V3.3 *** AT1G59650.1)
Sequence

ATGGGAGCATGTGTATCGCGTCCAGATAGTTGTGTTGGAGGTAAATTGAAAGGTTCAAAT
AAGTTTAGGAAAAAAAGGGGGGGAAGAAGAAGAAGGAAGAAATCTAACTCACTTCATAAA
ATTGATGAGGCGTTTCCTTTGGATAACTATAATCCAACATTTCAGGGACGGATTGAGGAG
GCATGGTTTGATTCTGCTGCAATATTTGAATCTGATTGCAGTGATGAAGATTTCCAGAGT
GTTCCTGATGATGTACTTTCTGTCAACAGCTTTGATTGTGGGCGGACTAGTGTAGCTTCG
ATCAAAGATACTAACAATGGGGATGTTAATTTAAACCCCGATGGACCTCACAGTGAGGTA
CGGCCTGTTTTCCTTGATGAGATCTCGTCCTCGGAAAATATAGGTAGTGGCAGGGAGGAT
GGTTTGTCGGAGAACTGTGGAATTCTTTCAAACAACTGTCTGCCCCGTCTTACCTCCACT
GTTGTGCCTGTTGAGAAGAGATCTCTTAGCTCTAGTCCTCCAAGTTCAAGGAAGAAAGCG
GACCTAAAGCTTCCCTTCAAATGGAAAGATGGAAATCCTTGTGCCACTCTACTTTCATCT
AAAACCCTGCTTCAAAGGCCCATAGCTGGTAGCCAAGTACCAGTTTGCCCGTTGGAGAAT
AAATTGCCTGATAGTTGGTCCTATATTGAACCAAATACCTTCAGGGTCCGGGGAGGAAAC
TATTTCAGGGACAAAAAGAAAGAGTTTGCGGCAAATAATGCTGCATATTATCCTTTTGGC
GTTGACGTATTTTTATCTCAAAGAAAAATTGATCACATTGCTCAACTTGTGGAACTTCCT
GTCATTGAACACTCTGGGACACTTCCACCCATTCTTGTAGTGAACATTCAGGTGCCATTA
TATCCTACCGCAATTTTTCAGGGTGAAACTGACGGTAAAGGAATGAGTTTTGTCTTGTAC
TTTAAGCTTTCCGAAAGTTATGCAAAAGAACTTCCTTCTTATTTTCAGGAGAACATCAGA
AGAGTAATGGATGATGAAGTGGAAAAAGTGAAGGCTTTTCCAATGGATGGTACTGTTCCG
TTTAGGGAAAGGTTAAAGATATTAGGTCGTGTAGCAAATATGGAGGACCTTCGGTTAAGT
GCAGCAGAGAGGAAGCTGATGCAGGCATACAATGAAAAACCTGTTCTTTCACGTCCTCAA
CATGAGTTCTATAAGGGAGAAAATTATTTTGAGATTGATATTGATATGCACAGATTCAGT
TACATCTCTAGAAAGGGTTGCGAAACATTCCTAGATAGGCTAAAGCTATGCTCCTTGGAT
GTAGGCCTCACAATTCAGGGTAACAAAATTGAAGAATTGCCGGAGCAGATCTTATGTTGT
ATACGATTAAATGAAATCGACTATGTGAATTATCAGCAACTCGGGGCTAATAATGAAACC
CCTTGA

Peptide Sequence

PEP ID

Solyc04g005860.3.1
PEP Infomation

CW14 protein (DUF1336) (AHRD V3.3 *** AT1G59650.1)
Sequence

MGACVSRPDSCVGGKLKGSNKFRKKRGGRRRRKKSNSLHKIDEAFPLDNYNPTFQGRIEE
AWFDSAAIFESDCSDEDFQSVPDDVLSVNSFDCGRTSVASIKDTNNGDVNLNPDGPHSEV
RPVFLDEISSSENIGSGREDGLSENCGILSNNCLPRLTSTVVPVEKRSLSSSPPSSRKKA
DLKLPFKWKDGNPCATLLSSKTLLQRPIAGSQVPVCPLENKLPDSWSYIEPNTFRVRGGN
YFRDKKKEFAANNAAYYPFGVDVFLSQRKIDHIAQLVELPVIEHSGTLPPILVVNIQVPL
YPTAIFQGETDGKGMSFVLYFKLSESYAKELPSYFQENIRRVMDDEVEKVKAFPMDGTVP
FRERLKILGRVANMEDLRLSAAERKLMQAYNEKPVLSRPQHEFYKGENYFEIDIDMHRFS
YISRKGCETFLDRLKLCSLDVGLTIQGNKIEELPEQILCCIRLNEIDYVNYQQLGANNET
P*

Transcript Sequence

Transcript ID

Solyc04g005860.3.1
Transcript Infomation

CW14 protein (DUF1336) (AHRD V3.3 *** AT1G59650.1)
Sequence

TTTTGACTTTCCTATGAGAAGAAGAAAAAGAAGAAAGAATGGAACTTTCTTTTCTTCTTC
TCTGAAAATCATGTAACATAATTCCAAGAATATATCCTCTATTTTGTTTTTTTGAGATAA
TTAATGGCTTCTCCACCTCTTCAAGCTTCAAAATTCCTCAAAAATCAATAGATTTTTCTC
TCTCTAAAAAAAAATGATATAGATTTTTTTTTGTTGTTGTTGTTGATATGATATAGTAGT
TGTTGAGAAGCATATGATTCTGCTGAAATGGGAGCATGTGTATCGCGTCCAGATAGTTGT
GTTGGAGGTAAATTGAAAGGTTCAAATAAGTTTAGGAAAAAAAGGGGGGGAAGAAGAAGA
AGGAAGAAATCTAACTCACTTCATAAAATTGATGAGGCGTTTCCTTTGGATAACTATAAT
CCAACATTTCAGGGACGGATTGAGGAGGCATGGTTTGATTCTGCTGCAATATTTGAATCT
GATTGCAGTGATGAAGATTTCCAGAGTGTTCCTGATGATGTACTTTCTGTCAACAGCTTT
GATTGTGGGCGGACTAGTGTAGCTTCGATCAAAGATACTAACAATGGGGATGTTAATTTA
AACCCCGATGGACCTCACAGTGAGGTACGGCCTGTTTTCCTTGATGAGATCTCGTCCTCG
GAAAATATAGGTAGTGGCAGGGAGGATGGTTTGTCGGAGAACTGTGGAATTCTTTCAAAC
AACTGTCTGCCCCGTCTTACCTCCACTGTTGTGCCTGTTGAGAAGAGATCTCTTAGCTCT
AGTCCTCCAAGTTCAAGGAAGAAAGCGGACCTAAAGCTTCCCTTCAAATGGAAAGATGGA
AATCCTTGTGCCACTCTACTTTCATCTAAAACCCTGCTTCAAAGGCCCATAGCTGGTAGC
CAAGTACCAGTTTGCCCGTTGGAGAATAAATTGCCTGATAGTTGGTCCTATATTGAACCA
AATACCTTCAGGGTCCGGGGAGGAAACTATTTCAGGGACAAAAAGAAAGAGTTTGCGGCA
AATAATGCTGCATATTATCCTTTTGGCGTTGACGTATTTTTATCTCAAAGAAAAATTGAT
CACATTGCTCAACTTGTGGAACTTCCTGTCATTGAACACTCTGGGACACTTCCACCCATT
CTTGTAGTGAACATTCAGGTGCCATTATATCCTACCGCAATTTTTCAGGGTGAAACTGAC
GGTAAAGGAATGAGTTTTGTCTTGTACTTTAAGCTTTCCGAAAGTTATGCAAAAGAACTT
CCTTCTTATTTTCAGGAGAACATCAGAAGAGTAATGGATGATGAAGTGGAAAAAGTGAAG
GCTTTTCCAATGGATGGTACTGTTCCGTTTAGGGAAAGGTTAAAGATATTAGGTCGTGTA
GCAAATATGGAGGACCTTCGGTTAAGTGCAGCAGAGAGGAAGCTGATGCAGGCATACAAT
GAAAAACCTGTTCTTTCACGTCCTCAACATGAGTTCTATAAGGGAGAAAATTATTTTGAG
ATTGATATTGATATGCACAGATTCAGTTACATCTCTAGAAAGGGTTGCGAAACATTCCTA
GATAGGCTAAAGCTATGCTCCTTGGATGTAGGCCTCACAATTCAGGGTAACAAAATTGAA
GAATTGCCGGAGCAGATCTTATGTTGTATACGATTAAATGAAATCGACTATGTGAATTAT
CAGCAACTCGGGGCTAATAATGAAACCCCTTGAATAGGTGCACTAGCAGTGTATTCCACC
GGATATGGCAAATAAGTGAAGAAATTATTGTTAGCTAGTTGTGTCCCTCCCTTTTACCTC
AACTGTCAAATCTCTGAGAAGCAAATGGCTTATCGAGAGAGTAGTAGATATTTGAATCTA
TGGACAAGGATGAGAAAATAGTCGAGTGGTGTTCTTTGTTTCAATGTTTCATCAAACCGC
AGTCGATCTGTTTTTATTTTGGATTTTTTTGATGCAACACATCCATTTAGTTCTTCATGT
TTTAAAAAGAAAAATGTAAATATTCTCAAAATCTTGAAAGAT