Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g005790.3.1
CDS Infomation

nitrate transporter 1:2 (AHRD V3.3 *** AT1G69850.1)
Sequence

ATGGAAGTGGAAAGCCAAAGCAAACTAATTAGCACAAATTGGGAAGGCTATGTTGATTGG
AGAAATAGGCCAGCACTTATCAATAGACATGGTGGCTTGGTGGCTTCATCCTTTGTCTTA
GTGGTGGAGGTGTTGGAAAATTTGGCATATCTAGCAAATGCAAGTAACTTGGTGATGTAC
TTATCTGAGTACATGCACTATTCACCAACCAATTCAGCAAATTGTGTGACTAATTTTATG
GGCACAGCCTTTCTACTTGCACTTCTTGGTGGCTTCTTATCTGATGCTTTCTTCACAACT
TATCACATCTATTTGATCAGTGCATTCATTGAATTTCTGGGTCTAGTGATACTCACAATA
CAAGCTCGATCGGACTCGTTGAAACCATCAAAGTGCAAGCCAGAGATGGCTTGTGAACAA
GTCCGCGGTGCACAAGCTGCAATGTTGTTTATAGGACTTTACTTAGTGGCATTGGGTGTT
GGAGGTATCAAAGGATCATTGCCACCCCATGGAGCTGAACAATTTGACGGCGAAACACCA
CAAGGGAGGAAACAAAGATCAACTTTCTTCAATTACTTTGTGTTTTGCCTCTCATGTGGT
GGCCTCATTGCCGTCACATTTGTTGTATGGGTTGAAGACAATAAAGGTTGGCAATGGGGA
TTTGGGATTTCAACGCTCGCTATATTATTATCGATCCCAATATTCCTTGCTGGTTCACCT
TTCTATAGGAACAAAATACCTCGCGGAAGTCCTTTAACTACTATATCTAAGGTTCTTATT
GCTGCAATGGTAAACTCGTGTGCATGGACAAATTCAAGTAGTGTAATAGCAAGTCTGGGA
TCAAGCCCTTCGACAATTCCAGTACTATCGAATGAAGATGAGGAGATTAGTAGAAACAAC
AAACATATAGTAGAATCGAAAAGTCTGAGATTTCTTAATCGAGCAGCTGTAAAGAAACCA
GCAGCAGCTTCTGGTGTGCTACAATGTTCGGTACAGGAAGTTGAAGAAGTGAAGATTGTG
GTGAAAATCCTCCCGATTTTCGGCTGTACTATTATGCTCAACTGTTGCTTAGCTCAACTA
TCCACATTCTCAGTTCAACAAGCAGCAACTATGAATACAAAATTTGGAAAGTTAAAAGTA
CCACCAGCTTCACTTCCTATATTCCCTGTACTTTTCATCATGATCCTGGCACCAATTTTC
GACTACTTCATCATTCCATTTGCTCGTAAGGTAACGAAAACTGAAATGGGAATCACTCAC
CTCCAACGTATAGGGATCGGATTGTTCCTCTCTGTTATCGCTATGGCAATTGCAGCTCTC
GTTGAAATCAAACGGAAGAGAGTAGCTACTGACTCCTCACTACTCGATTCTTCAAAGCCA
TTGCCTATAACGTTCTTTTGGATCGCGATTCAGTACTTGTTTCTTGGATCAGCTGATTTG
TTCACTCTAGCTGGACTGTTAGAATTCTGTTTCTCAGAAGCAGCATTTAGTATGAGATCA
TTAGCAACATCACTCTCTTGGGCTTCATTAGCAATTGGATACTATCTAAGCACAGTGATA
GTATCCATTGTCAATAATGTTACAGGAGATTCAAAGCATCAACCATGGCTAACCGGCAAA
AACTTGAATCATTTCCATTTGGAGAGATTCTACTGGTTAATGTGCATACTCAGCGCGTTG
AATTTCGTACATTATTTGTATTGGGCAAGAAAATACAAGTACACATCAGTATCCTCTCAA
GGATAA

Peptide Sequence

PEP ID

Solyc04g005790.3.1
PEP Infomation

nitrate transporter 1:2 (AHRD V3.3 *** AT1G69850.1)
Sequence

MEVESQSKLISTNWEGYVDWRNRPALINRHGGLVASSFVLVVEVLENLAYLANASNLVMY
LSEYMHYSPTNSANCVTNFMGTAFLLALLGGFLSDAFFTTYHIYLISAFIEFLGLVILTI
QARSDSLKPSKCKPEMACEQVRGAQAAMLFIGLYLVALGVGGIKGSLPPHGAEQFDGETP
QGRKQRSTFFNYFVFCLSCGGLIAVTFVVWVEDNKGWQWGFGISTLAILLSIPIFLAGSP
FYRNKIPRGSPLTTISKVLIAAMVNSCAWTNSSSVIASLGSSPSTIPVLSNEDEEISRNN
KHIVESKSLRFLNRAAVKKPAAASGVLQCSVQEVEEVKIVVKILPIFGCTIMLNCCLAQL
STFSVQQAATMNTKFGKLKVPPASLPIFPVLFIMILAPIFDYFIIPFARKVTKTEMGITH
LQRIGIGLFLSVIAMAIAALVEIKRKRVATDSSLLDSSKPLPITFFWIAIQYLFLGSADL
FTLAGLLEFCFSEAAFSMRSLATSLSWASLAIGYYLSTVIVSIVNNVTGDSKHQPWLTGK
NLNHFHLERFYWLMCILSALNFVHYLYWARKYKYTSVSSQG*

Transcript Sequence

Transcript ID

Solyc04g005790.3.1
Transcript Infomation

nitrate transporter 1:2 (AHRD V3.3 *** AT1G69850.1)
Sequence

AATATCAGTTCTTCCCTTCTCTTCTTTCTTATAATTATCTCCCTCCTTTAATTTATCTCC
CCTCCTTAACAACTACTACTAGCTAGTTATAAAATTTATTTGATGTTCTTATATTATATA
TAATCTACCAAATTTTAGGTGATAATATCACATCTATTCATCTTCTCTTCTAAAAAAGTT
GAAGAAGTTCATCAATGGCAAATTACACAAAAAATTGATTTTTTTTCTATTAGGGGGAGG
TTATAGCCTTTGTACTCCAATTGAGATTAAACTTGTAGGAAAAGCAGTAAATAAATAAAT
AAATGGAAGTGGAAAGCCAAAGCAAACTAATTAGCACAAATTGGGAAGGCTATGTTGATT
GGAGAAATAGGCCAGCACTTATCAATAGACATGGTGGCTTGGTGGCTTCATCCTTTGTCT
TAGTGGTGGAGGTGTTGGAAAATTTGGCATATCTAGCAAATGCAAGTAACTTGGTGATGT
ACTTATCTGAGTACATGCACTATTCACCAACCAATTCAGCAAATTGTGTGACTAATTTTA
TGGGCACAGCCTTTCTACTTGCACTTCTTGGTGGCTTCTTATCTGATGCTTTCTTCACAA
CTTATCACATCTATTTGATCAGTGCATTCATTGAATTTCTGGGTCTAGTGATACTCACAA
TACAAGCTCGATCGGACTCGTTGAAACCATCAAAGTGCAAGCCAGAGATGGCTTGTGAAC
AAGTCCGCGGTGCACAAGCTGCAATGTTGTTTATAGGACTTTACTTAGTGGCATTGGGTG
TTGGAGGTATCAAAGGATCATTGCCACCCCATGGAGCTGAACAATTTGACGGCGAAACAC
CACAAGGGAGGAAACAAAGATCAACTTTCTTCAATTACTTTGTGTTTTGCCTCTCATGTG
GTGGCCTCATTGCCGTCACATTTGTTGTATGGGTTGAAGACAATAAAGGTTGGCAATGGG
GATTTGGGATTTCAACGCTCGCTATATTATTATCGATCCCAATATTCCTTGCTGGTTCAC
CTTTCTATAGGAACAAAATACCTCGCGGAAGTCCTTTAACTACTATATCTAAGGTTCTTA
TTGCTGCAATGGTAAACTCGTGTGCATGGACAAATTCAAGTAGTGTAATAGCAAGTCTGG
GATCAAGCCCTTCGACAATTCCAGTACTATCGAATGAAGATGAGGAGATTAGTAGAAACA
ACAAACATATAGTAGAATCGAAAAGTCTGAGATTTCTTAATCGAGCAGCTGTAAAGAAAC
CAGCAGCAGCTTCTGGTGTGCTACAATGTTCGGTACAGGAAGTTGAAGAAGTGAAGATTG
TGGTGAAAATCCTCCCGATTTTCGGCTGTACTATTATGCTCAACTGTTGCTTAGCTCAAC
TATCCACATTCTCAGTTCAACAAGCAGCAACTATGAATACAAAATTTGGAAAGTTAAAAG
TACCACCAGCTTCACTTCCTATATTCCCTGTACTTTTCATCATGATCCTGGCACCAATTT
TCGACTACTTCATCATTCCATTTGCTCGTAAGGTAACGAAAACTGAAATGGGAATCACTC
ACCTCCAACGTATAGGGATCGGATTGTTCCTCTCTGTTATCGCTATGGCAATTGCAGCTC
TCGTTGAAATCAAACGGAAGAGAGTAGCTACTGACTCCTCACTACTCGATTCTTCAAAGC
CATTGCCTATAACGTTCTTTTGGATCGCGATTCAGTACTTGTTTCTTGGATCAGCTGATT
TGTTCACTCTAGCTGGACTGTTAGAATTCTGTTTCTCAGAAGCAGCATTTAGTATGAGAT
CATTAGCAACATCACTCTCTTGGGCTTCATTAGCAATTGGATACTATCTAAGCACAGTGA
TAGTATCCATTGTCAATAATGTTACAGGAGATTCAAAGCATCAACCATGGCTAACCGGCA
AAAACTTGAATCATTTCCATTTGGAGAGATTCTACTGGTTAATGTGCATACTCAGCGCGT
TGAATTTCGTACATTATTTGTATTGGGCAAGAAAATACAAGTACACATCAGTATCCTCTC
AAGGATAACAAGTGACAGCGCGGATATATATATATATATATGTATACAGACTGATGTATC
CTTGTACTGTAAATACGTCTGATGAGTTGCGTGGGCGTTGTCCACGCAACAGCCAAAAAG
GGCTAGCTAGACGAGGTAAAGGGGATATCTATCCGGTTTTGATCAATTGATAAAG