Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc04g005500.3.1
CDS Infomation	T-box transcription factor, putative (DUF863) (AHRD V3.3 *** AT1G69360.1)
Sequence	ATGAGCTACCTTAGCGAGGATTTAAACAATAGATGGCCCCTGCATTTTGGAGAGAAAATC TTCACAAACGCTCAATACTGTAATGGTTTCATGCCAAGGAATACGACAGATTCAGATCCT GGATATGATAAGGATGTTCTAAAGCAGAAAATACTCGAACACGAGGAAACATTCAAGAAT CAGGTATTTGAACTTCATCGCCTTTACAGAACTCAGAGGGACATGATGTATGACATTAAA AGGACGGAATTGCATAGACCTTGGACATCAATGGAGCCATCATCTTCATCAAACATTCTT GGATCCCATTTACTACCTAAAGATGCTTGGAAAGGCCATAGCAACGGCTTCCCCTTTGCA AATTCAAGTTATGCTAGACCATCTATGTCTGGTACTGAAATTGTAAATTCCCCATTCAGT TCTTCAAAAGCGAATGATGTACAGTCTGGTCACGGTCAAATGCAAAATGGTTGCTCTTCA AAGATCTGTGAATCTTTGGATGCTAGGCCCTCAAAATTACGGAAGAAGATGTTCGATCTT CAACTTCCAGCTGATGAGTACATAGATACTGATGAAGTTGAGCAGTTGCGAGATGATGAA GGATCGTTCTATCCAAGTTCCCGTGCTAATGGAAATAATAAAGTTTCCCAAGAGAATTGT ACAAGATTATTCCCTGGTGCTGGTACAAAGAGTGATAAAAAAGATGCTTCAGCATCCCAT TCGTGTTTCAGAAGCTCAGTCAGGTTGGCTGATCTCAATGAACCAGCTCAGCCTGAAGAA GCAATCTCATTGCCTGTTGATTTTCTTGGATATGGTAATAGTCATAAGGAGACGAGAAGC CTAAACGCTTCCGCTAACTCAAATCCAGCATTTGTGGCTTTGCCTAGAGAAACCACACGG AACTCCCATCATACAAGCCTTAGTAAAGGCAAAGAGAGGGACTGGTTCCCTTCCACATAT GAAACAGGTAAAGTTGAAGGTAGGTTGACTCCAGCACCTCATAATTTTTCACACAACAAG TTCCCTACACCACGCCAACTGGCACAAGTAATGCTTGATAAAGCCTTTCAACGTCCCGGG GTTCAATCACCTCAGTATTTCAAGGATGACCAATGGAAAGAGAGAGTGGGGCATGGTCCA GAAACCTTCCACGTAAATCATGAGAAGTCCGAATATACGTATGGGAGACCATTTATCACT TCTGGGACAGCTAGTCCATATCCATTCGCTAATTCCTCAGAGTTTACCGATTCATGGTCG CACACACTCTCTTCTTGGGGTAAACCAAGTGGCTTTGTTGCACGGCTATCATCAGGACAT ACAAACCCGTCATTGAACTCATGTGCCATGGTAGGTAAGAGTCCGAAATCACCTCAATAC CATGATATATTTGGAGACAAGTGGCGTATTGATGGCAGTTCTAAATCAAATTTAGGTGAG GCTACTAATTTCTCCATCAGGAATGGGTTTGACCATGGGTCCTCATCAGGGCCCAAAGAA TCACCCCGTTGGTTCTCTGTTGCTTTTGACTCTGAGAAGCAAAACAAGAGTGACAATTTG ACATCTGACCGCTCCTTTAACAATGGATGTGAGAAATCTCCTATTACCTCCTATAATATG GACTTGACATCAGAAAAAGGTTTTGATTTGAATGTACTATCAAAGGATTCAATAAATGAG GAACTTGCCAGCAGAGATCTTGAGTTGGTTGATGAAAAACGAGAGCCTCAAGACTGTAAA CCAGTGTTGCCGTGGCTTAAAGCTAAACCAAGTTTCAAAAATGAGAGTACAAAGACCACG AATGGAATGGTTGAAGCCTACACAAACTCACCCATCTGTGGAAATGGTCCGTTGAAAAGT TTCAGCGATGTCTGCAATGCGCAGAATATTGCATCAGCTATGATAGATCTTAACATGAAG GCCACAAAAGAGTTGGGGGAAACCCGAAGTGTCAGGAAAATTCTGGGGGCTCCAATTCCT GAAATTTCATGTGCTTCCAAAAATGAGTCATCTTCATTTGTTTCCACGTCTGCTACTCTT TGTTCCTCACCCATAGAAGAGAACAGCAGACACAAAGAGAGGAGAATAGTGATTGACATT AACATAGCTTGTGACCTTTCTATGGTTGAGCCCGAGAAACAGGTTGTCATGGAAGCAGTT GTTGCTGAGACAGCAATGGAAACAAAAGCTACCATTATCAGAAATCCCTTCGATTTGAAC TCATGTATTACTGAAGATGATGATTCATTCTTTGTCGAAAGCGATAATGTCAATGTGAGA ACTGTCGTCGAGATAGATTTGGAAGCTCCTCCTGTTCTGGAAACTGAGCTAGACAATTTG TCTAAAGAAAATGGCAAACAAAATGAAGCATCTTTGCAGTTGCCTGAACACAAACCTGAG GAAATACAGGATGAAGTTGTCAGGGTCGCAGCGGAAGCTATAGTTGCCATTTCATCATCC AGTCAAATAGACACCATCTCCGGTGATCCATCTGATGATCCTCTGGGATCCCTAGGTTGG TTTGTTGGCATAGTCATTTCTTTTGAGAGTGAACTTGAGAGCAAGTCTAAAGAAATAATA GTCGAGGACGCTATGATTGTTGCGCGACCTACTACTAACTTGGAGATGGATTACTTTGAG GCAATGACATTGCAGCTAGAAGAGACTAAGGAACAAGACTACCTGCCCAAGCCTTTTGTT CCTGAAGTCCAACCAGTGGAAGATGCAGGAGCCACTTCACTAACAAATCGAACCAGAAGA GGACAAGGAAGGTGGGGAAGACAGCGGAGGGACTTTCAAAGGGATATCCTTCCCGGACTA GTTTCCCTGTCAAGGCATGAAGTGACTGAAGACATTCAGACCTTCGGAGAGTTGATGAGA GCTACAGGTCATTCTTGGAACTCAGGATCGAAGAGAAGGAATGGAGGTACGAGGGGAAGG CGGAGGATGGTGATTGAGACCACCCCTGTCACTGTGTCAACCCGATTAAGCCCTCCTCTA AAGCAGAATTTGAGTAACATTGTATCCAGTTTGGAGGACAAAAGCCTTACAGGGTGGGGG GGCAAGACAACTAGACGTCCGAGGAGGCAAAGATGCCCTGCAGATCATCCTCCTGCTGTC CCATTTACTAGAACTATGTGA

Peptide Sequence

PEP ID	Solyc04g005500.3.1
PEP Infomation	T-box transcription factor, putative (DUF863) (AHRD V3.3 *** AT1G69360.1)
Sequence	MSYLSEDLNNRWPLHFGEKIFTNAQYCNGFMPRNTTDSDPGYDKDVLKQKILEHEETFKN QVFELHRLYRTQRDMMYDIKRTELHRPWTSMEPSSSSNILGSHLLPKDAWKGHSNGFPFA NSSYARPSMSGTEIVNSPFSSSKANDVQSGHGQMQNGCSSKICESLDARPSKLRKKMFDL QLPADEYIDTDEVEQLRDDEGSFYPSSRANGNNKVSQENCTRLFPGAGTKSDKKDASASH SCFRSSVRLADLNEPAQPEEAISLPVDFLGYGNSHKETRSLNASANSNPAFVALPRETTR NSHHTSLSKGKERDWFPSTYETGKVEGRLTPAPHNFSHNKFPTPRQLAQVMLDKAFQRPG VQSPQYFKDDQWKERVGHGPETFHVNHEKSEYTYGRPFITSGTASPYPFANSSEFTDSWS HTLSSWGKPSGFVARLSSGHTNPSLNSCAMVGKSPKSPQYHDIFGDKWRIDGSSKSNLGE ATNFSIRNGFDHGSSSGPKESPRWFSVAFDSEKQNKSDNLTSDRSFNNGCEKSPITSYNM DLTSEKGFDLNVLSKDSINEELASRDLELVDEKREPQDCKPVLPWLKAKPSFKNESTKTT NGMVEAYTNSPICGNGPLKSFSDVCNAQNIASAMIDLNMKATKELGETRSVRKILGAPIP EISCASKNESSSFVSTSATLCSSPIEENSRHKERRIVIDINIACDLSMVEPEKQVVMEAV VAETAMETKATIIRNPFDLNSCITEDDDSFFVESDNVNVRTVVEIDLEAPPVLETELDNL SKENGKQNEASLQLPEHKPEEIQDEVVRVAAEAIVAISSSSQIDTISGDPSDDPLGSLGW FVGIVISFESELESKSKEIIVEDAMIVARPTTNLEMDYFEAMTLQLEETKEQDYLPKPFV PEVQPVEDAGATSLTNRTRRGQGRWGRQRRDFQRDILPGLVSLSRHEVTEDIQTFGELMR ATGHSWNSGSKRRNGGTRGRRRMVIETTPVTVSTRLSPPLKQNLSNIVSSLEDKSLTGWG GKTTRRPRRQRCPADHPPAVPFTRTM*

Transcript Sequence

Transcript ID	Solyc04g005500.3.1
Transcript Infomation	T-box transcription factor, putative (DUF863) (AHRD V3.3 *** AT1G69360.1)
Sequence	CCTACCCCCACACCCCATACCCCCAAAAACTCACACACAAAACACCTTCTTTTTCTCTGT CTTAAAGAACCTTTCTTTCAGTGAGGCTTTGGCCCTTAAGGTTGAAAATGATAAAGCTCT AATCTTTTTCTTTAGTTTTACAAGGATCTTACCTTCTTCAATGTTCTTACCAAAATAACC ATCTTTGTATTACATTTAATATTAAATTTACTTCTTTTTTTTTGTGTATGTGTGTGGCTA ATTCTCCATGATTCTTGAAAAGATGTAATTTTTTCAAGAAAGGGGTTCTTGAGGAGATGG GGGTCTGAGCAGAATGGTAGCACAAGCCAATTGTAAAGGCTAAGTACCAGCTTATTACTC CATGAGCTACCTTAGCGAGGATTTAAACAATAGATGGCCCCTGCATTTTGGAGAGAAAAT CTTCACAAACGCTCAATACTGTAATGGTTTCATGCCAAGGAATACGACAGATTCAGATCC TGGATATGATAAGGATGTTCTAAAGCAGAAAATACTCGAACACGAGGAAACATTCAAGAA TCAGGTATTTGAACTTCATCGCCTTTACAGAACTCAGAGGGACATGATGTATGACATTAA AAGGACGGAATTGCATAGACCTTGGACATCAATGGAGCCATCATCTTCATCAAACATTCT TGGATCCCATTTACTACCTAAAGATGCTTGGAAAGGCCATAGCAACGGCTTCCCCTTTGC AAATTCAAGTTATGCTAGACCATCTATGTCTGGTACTGAAATTGTAAATTCCCCATTCAG TTCTTCAAAAGCGAATGATGTACAGTCTGGTCACGGTCAAATGCAAAATGGTTGCTCTTC AAAGATCTGTGAATCTTTGGATGCTAGGCCCTCAAAATTACGGAAGAAGATGTTCGATCT TCAACTTCCAGCTGATGAGTACATAGATACTGATGAAGTTGAGCAGTTGCGAGATGATGA AGGATCGTTCTATCCAAGTTCCCGTGCTAATGGAAATAATAAAGTTTCCCAAGAGAATTG TACAAGATTATTCCCTGGTGCTGGTACAAAGAGTGATAAAAAAGATGCTTCAGCATCCCA TTCGTGTTTCAGAAGCTCAGTCAGGTTGGCTGATCTCAATGAACCAGCTCAGCCTGAAGA AGCAATCTCATTGCCTGTTGATTTTCTTGGATATGGTAATAGTCATAAGGAGACGAGAAG CCTAAACGCTTCCGCTAACTCAAATCCAGCATTTGTGGCTTTGCCTAGAGAAACCACACG GAACTCCCATCATACAAGCCTTAGTAAAGGCAAAGAGAGGGACTGGTTCCCTTCCACATA TGAAACAGGTAAAGTTGAAGGTAGGTTGACTCCAGCACCTCATAATTTTTCACACAACAA GTTCCCTACACCACGCCAACTGGCACAAGTAATGCTTGATAAAGCCTTTCAACGTCCCGG GGTTCAATCACCTCAGTATTTCAAGGATGACCAATGGAAAGAGAGAGTGGGGCATGGTCC AGAAACCTTCCACGTAAATCATGAGAAGTCCGAATATACGTATGGGAGACCATTTATCAC TTCTGGGACAGCTAGTCCATATCCATTCGCTAATTCCTCAGAGTTTACCGATTCATGGTC GCACACACTCTCTTCTTGGGGTAAACCAAGTGGCTTTGTTGCACGGCTATCATCAGGACA TACAAACCCGTCATTGAACTCATGTGCCATGGTAGGTAAGAGTCCGAAATCACCTCAATA CCATGATATATTTGGAGACAAGTGGCGTATTGATGGCAGTTCTAAATCAAATTTAGGTGA GGCTACTAATTTCTCCATCAGGAATGGGTTTGACCATGGGTCCTCATCAGGGCCCAAAGA ATCACCCCGTTGGTTCTCTGTTGCTTTTGACTCTGAGAAGCAAAACAAGAGTGACAATTT GACATCTGACCGCTCCTTTAACAATGGATGTGAGAAATCTCCTATTACCTCCTATAATAT GGACTTGACATCAGAAAAAGGTTTTGATTTGAATGTACTATCAAAGGATTCAATAAATGA GGAACTTGCCAGCAGAGATCTTGAGTTGGTTGATGAAAAACGAGAGCCTCAAGACTGTAA ACCAGTGTTGCCGTGGCTTAAAGCTAAACCAAGTTTCAAAAATGAGAGTACAAAGACCAC GAATGGAATGGTTGAAGCCTACACAAACTCACCCATCTGTGGAAATGGTCCGTTGAAAAG TTTCAGCGATGTCTGCAATGCGCAGAATATTGCATCAGCTATGATAGATCTTAACATGAA GGCCACAAAAGAGTTGGGGGAAACCCGAAGTGTCAGGAAAATTCTGGGGGCTCCAATTCC TGAAATTTCATGTGCTTCCAAAAATGAGTCATCTTCATTTGTTTCCACGTCTGCTACTCT TTGTTCCTCACCCATAGAAGAGAACAGCAGACACAAAGAGAGGAGAATAGTGATTGACAT TAACATAGCTTGTGACCTTTCTATGGTTGAGCCCGAGAAACAGGTTGTCATGGAAGCAGT TGTTGCTGAGACAGCAATGGAAACAAAAGCTACCATTATCAGAAATCCCTTCGATTTGAA CTCATGTATTACTGAAGATGATGATTCATTCTTTGTCGAAAGCGATAATGTCAATGTGAG AACTGTCGTCGAGATAGATTTGGAAGCTCCTCCTGTTCTGGAAACTGAGCTAGACAATTT GTCTAAAGAAAATGGCAAACAAAATGAAGCATCTTTGCAGTTGCCTGAACACAAACCTGA GGAAATACAGGATGAAGTTGTCAGGGTCGCAGCGGAAGCTATAGTTGCCATTTCATCATC CAGTCAAATAGACACCATCTCCGGTGATCCATCTGATGATCCTCTGGGATCCCTAGGTTG GTTTGTTGGCATAGTCATTTCTTTTGAGAGTGAACTTGAGAGCAAGTCTAAAGAAATAAT AGTCGAGGACGCTATGATTGTTGCGCGACCTACTACTAACTTGGAGATGGATTACTTTGA GGCAATGACATTGCAGCTAGAAGAGACTAAGGAACAAGACTACCTGCCCAAGCCTTTTGT TCCTGAAGTCCAACCAGTGGAAGATGCAGGAGCCACTTCACTAACAAATCGAACCAGAAG AGGACAAGGAAGGTGGGGAAGACAGCGGAGGGACTTTCAAAGGGATATCCTTCCCGGACT AGTTTCCCTGTCAAGGCATGAAGTGACTGAAGACATTCAGACCTTCGGAGAGTTGATGAG AGCTACAGGTCATTCTTGGAACTCAGGATCGAAGAGAAGGAATGGAGGTACGAGGGGAAG GCGGAGGATGGTGATTGAGACCACCCCTGTCACTGTGTCAACCCGATTAAGCCCTCCTCT AAAGCAGAATTTGAGTAACATTGTATCCAGTTTGGAGGACAAAAGCCTTACAGGGTGGGG GGGCAAGACAACTAGACGTCCGAGGAGGCAAAGATGCCCTGCAGATCATCCTCCTGCTGT CCCATTTACTAGAACTATGTGAATGAGGCTTTAATTCATCACCTTCATGATTATTTCAAC ACATTAGGGACTTTGTTTATGAATTACAGGTGTGAAGTTGTTAGCTATGGGTTTCCTTGT ACATGTTTTGGTAGCACATAATTTGAGACACCATCATGATATGATGTCCATTGGGTTATT GGTTCAGTATTCAGCATAATGTCTTCTGGATCATCAGTTCTCCCAAATGCATCTTTTGGA TTTATTTAGAAAAGAATCATAAAAATTTATGTCAATGGAAGTATTATGGAATCTTTTTTG TTGTTTTACCACAATGGAAGCAGCTTAAGGTTGTATTTGGTAAAAGGAAAATAAGTCATT TTCTGGCAATTAAAAATCATAAATTATTTTCATTAATAATCTAAATGGAATTTGTATGTG CACCAAAAAGCTAGTTTAATAGAGTTAAATACAATATTAAAATTGACTTCCTGCATTCAG AATCTGCAACTTCTAAATTCGATATTGGCAACTACATATAATGTCTTTTTAACATATTAA TTATGTGCTTAAACATTAAAAATGCATGTTTTGCTCCTACTGAAAGTCCA