Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g005490.3.1
CDS Infomation

appr-1-p processing enzyme family protein (AHRD V3.3 *** AT1G69340.2)
Sequence

ATGTATCGCCCTGTGCCTATTACTACCCGAGGTGGGGAACCTACAGATAGTGGAGATCCT
GTGGTGACGTTGGACCAAGTTCCACGTTGGAGTAATGCGGAATTTAGGTATGCACATGAG
AATGAAGATCCTACTAATTCATGCTTTCCGGACCCCTTGGCATCTGCTTCTGGGTCTGAA
TTTAATGGTAGTGGCATAGTTTCCAAGTTTCCCATGGATCATGAGATTAACTCCAAGATA
TACTTGTGGAGAGGCGACCCCTGGAATCTCGAGGTAGATGCTGTTGTTAACTCTACTAAT
GAGAACTTAGACGAAGCTCACAGCAGCCCAGGATTGCATGCTTCAGCTGGACCTGGTCTT
GCAGAAGAGTGTGCCACATTGGGAGGCTGCCGGACAGGAATGGCAAAAGTTACAAATGCT
TATGATCTTCCTGCTAGGAGGGTCATACATACTGTTGGTCCCAAGTATGCTGTAAAATAC
CATATTGCTGCAGAGAATGCGCTAAGCCATTGCTATCGCTCTTGCTTTGAGCTTCTTATA
GAAAATGGGCTGAAGAGCATTGCTATGGACTGTATATATACAGAAGCGAAAAGTTACCCA
CGAGAACCAGCTGCTCATGTGGCAATAAGAACTGTAAGGCGGTTCATTGAGAAACAGAAA
GATAAAGTAGAGGCAATTGTTTTCTGTACTACTACATCACAAGATACGGAGATTTATAAA
AGATTGCTTCCACTCTATTTTCCTCGGGATAAGCATGAGGAGGAAGTTGCCCTTCTAAAA
CTTCCTGCAGATGTTGGGGATGAAAATGGGGAGACAACTATAGATGAGCGTAAAATTAGG
ATAAAACCGTTACCAAATGTCAAAAAGTCCAATCCAAGGATTTCCCAGGCCTCTGTTGAT
TTGTCTGTCAGTAATGTTGGTTTGACCAGGAGTTCATCCTATTTGGATGCTTTTCTGGAT
CCTGCTTTTATGTCCCTGATCAAGGACCCAGATCAGCGACGGAAAGAACAATGGGAAAAA
ACTGCCCAAGCTCAAACTAGCTGGAACTTCTTTAAAATGTTTGGATATGGTGACGTCGCA
GGACCTCCTTTGTCAGCTGCAGAAGAATACTCGCTTCATTCTAGATATATTGCAAAAGCA
AATACTCTGAATTTTTCAGAAATTGCAGAAATGAAAATTGTCTACCGAGGAGGGGTTGAC
AGTGAAGGCCGTCCAGTAATGGTTGTTGTGGGGGCACATTTCCTGCTAAGATGTCTTGAT
CTGGAGAGATTTATTATCCATGTTGTAAAGGAATTTGAACCATTGATACAGAAACCTTAC
TCTATTGTGTACTTCCATTCTGCTGCAACTCTACAGATGCAACCAGATCTAGGATTAATG
AAGAGGATACAACAAATTCTTGGTCGCAAGCACCGGCACAACCTTCATGCGATATATGTT
CTTCACCCTACTTTTGGACTGAAGAGTGCAGTTTTTGGTTTACAACTCTGTGTGGATAAT
GTGGTATGGAAGAAAATAGTATATGTAGATCGTCTTCTGCAATTATTCCGCTATGTTCCT
CGTGAGCAGCTGACTATTCCAGATTTTGTTTTCCAGCATGATTTGGAAGTAAATGGAGGG
AAGGGCCTAATTGTGGATCCTAGAACCAAGTATGTTTATCAGAGACCATAG

Peptide Sequence

PEP ID

Solyc04g005490.3.1
PEP Infomation

appr-1-p processing enzyme family protein (AHRD V3.3 *** AT1G69340.2)
Sequence

MYRPVPITTRGGEPTDSGDPVVTLDQVPRWSNAEFRYAHENEDPTNSCFPDPLASASGSE
FNGSGIVSKFPMDHEINSKIYLWRGDPWNLEVDAVVNSTNENLDEAHSSPGLHASAGPGL
AEECATLGGCRTGMAKVTNAYDLPARRVIHTVGPKYAVKYHIAAENALSHCYRSCFELLI
ENGLKSIAMDCIYTEAKSYPREPAAHVAIRTVRRFIEKQKDKVEAIVFCTTTSQDTEIYK
RLLPLYFPRDKHEEEVALLKLPADVGDENGETTIDERKIRIKPLPNVKKSNPRISQASVD
LSVSNVGLTRSSSYLDAFLDPAFMSLIKDPDQRRKEQWEKTAQAQTSWNFFKMFGYGDVA
GPPLSAAEEYSLHSRYIAKANTLNFSEIAEMKIVYRGGVDSEGRPVMVVVGAHFLLRCLD
LERFIIHVVKEFEPLIQKPYSIVYFHSAATLQMQPDLGLMKRIQQILGRKHRHNLHAIYV
LHPTFGLKSAVFGLQLCVDNVVWKKIVYVDRLLQLFRYVPREQLTIPDFVFQHDLEVNGG
KGLIVDPRTKYVYQRP*

Transcript Sequence

Transcript ID

Solyc04g005490.3.1
Transcript Infomation

appr-1-p processing enzyme family protein (AHRD V3.3 *** AT1G69340.2)
Sequence

TCCCATAAAAATTTGTTAATATACGAGTGTGACTATTAAGATAATTAACTCTGTTTTGCT
CCTTACCACAGTCTAAAACCCAAAATTTCAGTCAAAAGGGATACAAAATCTCGATACACT
TTCTGTTCAAGAAGATAATCTATGTTTTGGCGAGCTCATCACATCTCCATCTTCTTCCTC
CAGCAAAATTCATCCAAAAAGTTTCTGTCTTTGCCTTGCTTCTTGCTGTATTCTTGAAAC
CCCACATTGATTCTGCAGGGAGATTTGAGTTGTTCAAGTATAATCCATGTGGGGCTATTA
GATATCAGTATGAGTTTGACTTTTTCAATAATCAAATAAAGGAGAATGGCAGGTCTTTTT
TCGAACAATTAGAAGAGAGATTCAAAAAAGTGTAGCACAATATGTATCGCCCTGTGCCTA
TTACTACCCGAGGTGGGGAACCTACAGATAGTGGAGATCCTGTGGTGACGTTGGACCAAG
TTCCACGTTGGAGTAATGCGGAATTTAGGTATGCACATGAGAATGAAGATCCTACTAATT
CATGCTTTCCGGACCCCTTGGCATCTGCTTCTGGGTCTGAATTTAATGGTAGTGGCATAG
TTTCCAAGTTTCCCATGGATCATGAGATTAACTCCAAGATATACTTGTGGAGAGGCGACC
CCTGGAATCTCGAGGTAGATGCTGTTGTTAACTCTACTAATGAGAACTTAGACGAAGCTC
ACAGCAGCCCAGGATTGCATGCTTCAGCTGGACCTGGTCTTGCAGAAGAGTGTGCCACAT
TGGGAGGCTGCCGGACAGGAATGGCAAAAGTTACAAATGCTTATGATCTTCCTGCTAGGA
GGGTCATACATACTGTTGGTCCCAAGTATGCTGTAAAATACCATATTGCTGCAGAGAATG
CGCTAAGCCATTGCTATCGCTCTTGCTTTGAGCTTCTTATAGAAAATGGGCTGAAGAGCA
TTGCTATGGACTGTATATATACAGAAGCGAAAAGTTACCCACGAGAACCAGCTGCTCATG
TGGCAATAAGAACTGTAAGGCGGTTCATTGAGAAACAGAAAGATAAAGTAGAGGCAATTG
TTTTCTGTACTACTACATCACAAGATACGGAGATTTATAAAAGATTGCTTCCACTCTATT
TTCCTCGGGATAAGCATGAGGAGGAAGTTGCCCTTCTAAAACTTCCTGCAGATGTTGGGG
ATGAAAATGGGGAGACAACTATAGATGAGCGTAAAATTAGGATAAAACCGTTACCAAATG
TCAAAAAGTCCAATCCAAGGATTTCCCAGGCCTCTGTTGATTTGTCTGTCAGTAATGTTG
GTTTGACCAGGAGTTCATCCTATTTGGATGCTTTTCTGGATCCTGCTTTTATGTCCCTGA
TCAAGGACCCAGATCAGCGACGGAAAGAACAATGGGAAAAAACTGCCCAAGCTCAAACTA
GCTGGAACTTCTTTAAAATGTTTGGATATGGTGACGTCGCAGGACCTCCTTTGTCAGCTG
CAGAAGAATACTCGCTTCATTCTAGATATATTGCAAAAGCAAATACTCTGAATTTTTCAG
AAATTGCAGAAATGAAAATTGTCTACCGAGGAGGGGTTGACAGTGAAGGCCGTCCAGTAA
TGGTTGTTGTGGGGGCACATTTCCTGCTAAGATGTCTTGATCTGGAGAGATTTATTATCC
ATGTTGTAAAGGAATTTGAACCATTGATACAGAAACCTTACTCTATTGTGTACTTCCATT
CTGCTGCAACTCTACAGATGCAACCAGATCTAGGATTAATGAAGAGGATACAACAAATTC
TTGGTCGCAAGCACCGGCACAACCTTCATGCGATATATGTTCTTCACCCTACTTTTGGAC
TGAAGAGTGCAGTTTTTGGTTTACAACTCTGTGTGGATAATGTGGTATGGAAGAAAATAG
TATATGTAGATCGTCTTCTGCAATTATTCCGCTATGTTCCTCGTGAGCAGCTGACTATTC
CAGATTTTGTTTTCCAGCATGATTTGGAAGTAAATGGAGGGAAGGGCCTAATTGTGGATC
CTAGAACCAAGTATGTTTATCAGAGACCATAGTCTCAAAACTTCATCCGATAAAAGAAGA
AAATAGACGCTGTAGTAAGATTGTGGAATTTAAATTTGTTTGTACAGAGGCTGTAATTGT
TTTGTGCAATATTAGCAGTGTATTTAGCTAACTTTGTCTGTAATTTGATTTATTTATGCA
ACCATATGTCCAGTCCTGTGCTAGCTAATGGCAATAAATTTCTTTGTTTCTGCAACATTT
TCCCTTCTAGATATGTCATTTTAGTCCTAAATGAAGACTTGACCTGCCTCTTATTTTAAG
TTA