Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc04g005440.1.1
CDS Infomation	LOW QUALITY:Zinc finger family protein (AHRD V3.3 *** B9HID5_POPTR)
Sequence	ATGGAAGAAGATCAAGATTTGAAGTACTTTTGTAAGTTGTGTGACAAGAAGTATCCATGT GGGAAGTCATTTGGTGGTCATATGAGGTCTCATGTACTAGCAAAGGAAAAAGTTGAGTTT AAACAGAAAAAGTTGCAATCTTGGATTGATGGTGGGAAGAATAGTAGCAAGAAAGATCAT AAATCACAGTTTGAATTAAGTGAACATTCTGGTTATGGTCTTAGAGACAATCCCAAGAAA ACTTGGAGGGCTTCGGATTCGAGGTCTCCTTTGTTGTCTCAAGAGAATGTTTGTCAGCAA TGTGGTAAGGTGTTTCAATCGTTGAAAGCTTTGTGTGGTCATATGGCGTGTCACTCTGGC AAAGACAGGGGAGGGTCGAAAGATGATCACTCGTGGACTAGTGAAAACAAGAATCTGTTG ATGGATAGCAACTCGGATACTGAAGCCGATGAGCCAAAGCTGAAGAGCAGATCAAATACT AAAAGGTACAATAGACTTGTAGCTAAGTCTTCCTCTTTTTGCTTAGTTAACAATAGAAGT GTTTCATCACCTGTTTCTGAGATTGATGAGCAAGATCAAGAGGAAGTAGCTAAGTGTTTG ATGATGTTGTCGATGGATTCTGGGATTTGGAATGGTGTCAATTCAGTTGTTGAGTCTTCT GACAACAATTCTGTTATTTTGGAGACGAAATCATCATCTGTCGACATGAAAGTAGCTAGA AAGGGTTGTCTAAAGCCTGCTGAAAATGTAGATGAAACACATCGAAGGTGTAAAAAAGAG GCGGATAGAAACTTGAAACTTAATGCTTTGAATGCTGAAGCTGAGTCTGAGAATTCTGAT TCCGGATACTTTTTAGGCGAATATATGAAAGTTGAATCAGATGCATCTGTTGATGAGTTC CATAGAAATGTTAATTACCAATGGAATACATCTAACAAGAGTCTCAGAGTTTGGTGCGAT GAGACTAGAAGAGACGTGGAAAAGGGCTTTAACAGAACAACAACAAAGTACATAACAGAA ATGAGGAATGGTTCAACCAAAGACTATAAATATGAAAGCTATGGAATGGCTTCAAATTTG GCTAAGAGTGAATCAAGAAAGAGAATAAAGGATATATCTTATGAACCAGAATTAGGAAAA GAGTCGTCGTTTAGGAAGATAAAGGTCGGTTTTAAAGGTCCTGAAGGAAGCAAACATACT CGGAAGAAAAAAAAGTATGAGTGCTTCAACTGCAAGAAGGCATTTAGCTCTTATCAGGCT CTTGGTGGACACAGACCTTGCAACAAAAAAGCCAATGCCTATTTCGAATCAACATATGAA ACCGATGAGAATGGTCGTGGTGCTGAAAATGGTCCTAGTTACATAGACAAGGGTAAGCAT AGGGAGACATTTAACAACAGAAAACCAACTGTTCATGATGGTCAAGATGTCAATTACAAT CCTGAGAAGAAGATGAAGCCTAAAAAGTTCAAAGGGCATGAATGCCCGTTCTGCAACAGG ATGTTTAAGTCTGGACAAGCTTTAGGTGGCCACAAAAGGTCACATTTTCTTGTTGGTTCA CAGGAGAATCATAATCAAGCTTCAGTAGTCAAAGGATCAGAATTTGCTGATTTACTTGAT CTTAACCTTCCTGCTCCTGTTGAGGACATGAACGGTGAGCCTACCTTTGTGCATTGGTAG

Peptide Sequence

PEP ID	Solyc04g005440.1.1
PEP Infomation	LOW QUALITY:Zinc finger family protein (AHRD V3.3 *** B9HID5_POPTR)
Sequence	MEEDQDLKYFCKLCDKKYPCGKSFGGHMRSHVLAKEKVEFKQKKLQSWIDGGKNSSKKDH KSQFELSEHSGYGLRDNPKKTWRASDSRSPLLSQENVCQQCGKVFQSLKALCGHMACHSG KDRGGSKDDHSWTSENKNLLMDSNSDTEADEPKLKSRSNTKRYNRLVAKSSSFCLVNNRS VSSPVSEIDEQDQEEVAKCLMMLSMDSGIWNGVNSVVESSDNNSVILETKSSSVDMKVAR KGCLKPAENVDETHRRCKKEADRNLKLNALNAEAESENSDSGYFLGEYMKVESDASVDEF HRNVNYQWNTSNKSLRVWCDETRRDVEKGFNRTTTKYITEMRNGSTKDYKYESYGMASNL AKSESRKRIKDISYEPELGKESSFRKIKVGFKGPEGSKHTRKKKKYECFNCKKAFSSYQA LGGHRPCNKKANAYFESTYETDENGRGAENGPSYIDKGKHRETFNNRKPTVHDGQDVNYN PEKKMKPKKFKGHECPFCNRMFKSGQALGGHKRSHFLVGSQENHNQASVVKGSEFADLLD LNLPAPVEDMNGEPTFVHW*

Transcript Sequence

Transcript ID	Solyc04g005440.1.1
Transcript Infomation	LOW QUALITY:Zinc finger family protein (AHRD V3.3 *** B9HID5_POPTR)
Sequence	ATGGAAGAAGATCAAGATTTGAAGTACTTTTGTAAGTTGTGTGACAAGAAGTATCCATGT GGGAAGTCATTTGGTGGTCATATGAGGTCTCATGTACTAGCAAAGGAAAAAGTTGAGTTT AAACAGAAAAAGTTGCAATCTTGGATTGATGGTGGGAAGAATAGTAGCAAGAAAGATCAT AAATCACAGTTTGAATTAAGTGAACATTCTGGTTATGGTCTTAGAGACAATCCCAAGAAA ACTTGGAGGGCTTCGGATTCGAGGTCTCCTTTGTTGTCTCAAGAGAATGTTTGTCAGCAA TGTGGTAAGGTGTTTCAATCGTTGAAAGCTTTGTGTGGTCATATGGCGTGTCACTCTGGC AAAGACAGGGGAGGGTCGAAAGATGATCACTCGTGGACTAGTGAAAACAAGAATCTGTTG ATGGATAGCAACTCGGATACTGAAGCCGATGAGCCAAAGCTGAAGAGCAGATCAAATACT AAAAGGTACAATAGACTTGTAGCTAAGTCTTCCTCTTTTTGCTTAGTTAACAATAGAAGT GTTTCATCACCTGTTTCTGAGATTGATGAGCAAGATCAAGAGGAAGTAGCTAAGTGTTTG ATGATGTTGTCGATGGATTCTGGGATTTGGAATGGTGTCAATTCAGTTGTTGAGTCTTCT GACAACAATTCTGTTATTTTGGAGACGAAATCATCATCTGTCGACATGAAAGTAGCTAGA AAGGGTTGTCTAAAGCCTGCTGAAAATGTAGATGAAACACATCGAAGGTGTAAAAAAGAG GCGGATAGAAACTTGAAACTTAATGCTTTGAATGCTGAAGCTGAGTCTGAGAATTCTGAT TCCGGATACTTTTTAGGCGAATATATGAAAGTTGAATCAGATGCATCTGTTGATGAGTTC CATAGAAATGTTAATTACCAATGGAATACATCTAACAAGAGTCTCAGAGTTTGGTGCGAT GAGACTAGAAGAGACGTGGAAAAGGGCTTTAACAGAACAACAACAAAGTACATAACAGAA ATGAGGAATGGTTCAACCAAAGACTATAAATATGAAAGCTATGGAATGGCTTCAAATTTG GCTAAGAGTGAATCAAGAAAGAGAATAAAGGATATATCTTATGAACCAGAATTAGGAAAA GAGTCGTCGTTTAGGAAGATAAAGGTCGGTTTTAAAGGTCCTGAAGGAAGCAAACATACT CGGAAGAAAAAAAAGTATGAGTGCTTCAACTGCAAGAAGGCATTTAGCTCTTATCAGGCT CTTGGTGGACACAGACCTTGCAACAAAAAAGCCAATGCCTATTTCGAATCAACATATGAA ACCGATGAGAATGGTCGTGGTGCTGAAAATGGTCCTAGTTACATAGACAAGGGTAAGCAT AGGGAGACATTTAACAACAGAAAACCAACTGTTCATGATGGTCAAGATGTCAATTACAAT CCTGAGAAGAAGATGAAGCCTAAAAAGTTCAAAGGGCATGAATGCCCGTTCTGCAACAGG ATGTTTAAGTCTGGACAAGCTTTAGGTGGCCACAAAAGGTCACATTTTCTTGTTGGTTCA CAGGAGAATCATAATCAAGCTTCAGTAGTCAAAGGATCAGAATTTGCTGATTTACTTGAT CTTAACCTTCCTGCTCCTGTTGAGGACATGAACGGTGAGCCTACCTTTGTGCATTGGTAG