Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc04g005425.1.1
CDS Infomation	Pentatricopeptide repeat (PPR) superfamily protein (AHRD V3.3 *** A0A061EBH5_THECC)
Sequence	ATGCTAGATGTGATTGGAAAATCAAGAAACATTGACCTTTTCTGGGAAGTGATTCAAGAA ATTGGAAGGTGTCAGTTGGTCACCCCTAAGACTTATGTAGTTGGGGTGAAAACTCTGGCT TCAGCTAGGGAGTTGAAGAAATGTGTTGGAGTATTTCATTTGATGAATGGATATGGATAT GGGTATAGTCTTGATGTATTGAATAAGGTAGTTGAAGCTCTTTGTAGATCTAAGCTTGTT GAGGAGGCTGAGCATGTTGTATTGAAGTTGAAAAATTGGGTAAAACCAAATGAGGTTACT TATAGATGGTTGATTTACGGGTTTTGTGATGTTGGTGATGTGATTGAAGCTTCAAAGATT TGGAATTTAATGGTGGATGAAGGTTTTGAACCTGAAATTGCGTCGATTGAGACTATGATT GAGATCCTTTTCAAGAATAATCGATATGTTGAAGCATTGAAGGTTTTTCAATCTGTTAGA GTAAATAGGATGAGTGAATTAGGGGTTTCGACTTATAGGTTGGTGATCAGTTGGTTGTGC AAGAAAGGGAAGCTTGGAGAGAGTTACTTGGTGTTTGAAGAAATGGAAAAGAGAGGGATT AAGGCGGATAATCTTACATTAGGATCGATTACGTATGGGCTTATGAGTAGAGGACGAGTT ATGGAAGCGTATAGGGTTGTGGAAGGAATAGAGAAGCCCGATATAAGTGTTTATCACGGG ATGATCAAGGGGTTGTTGAAATTGAAAAGAGCAAGTGAAGCAACTGAGGTATTTAGGGAG ATGATTAAAAGGGGATGTGAGCCGATAATGCATACGTATGTCATGTTGTTACAAGGGCAT TTAGGGAGGAGAGGGAGGAAAGGATCAGATCCTCTTGTGAATTTTGATACCATCTTCGTA GGAGGTTTGGTAAAGGCAGGGAAAACGTTGGAGGCAAACAAATATGCAGAGAGATTACTG TACAGGAAAGTTGAGGTGCCTAGGTTTGATTATAACAAGTTTTTGCATTATTATTCCAAT GAGGAAGGGGTTGTTATGTTTGAGGTGATGAGCAACAAACTTAGAGAAGTTGGGCAATTC GATTTAGCTGATATATTTGCAAGGTATGGGGAGAGAATGGCAACTAGGGATAGGAGGAGA ATTAGAACAACAGAGTCATAA

Peptide Sequence

PEP ID	Solyc04g005425.1.1
PEP Infomation	Pentatricopeptide repeat (PPR) superfamily protein (AHRD V3.3 *** A0A061EBH5_THECC)
Sequence	MLDVIGKSRNIDLFWEVIQEIGRCQLVTPKTYVVGVKTLASARELKKCVGVFHLMNGYGY GYSLDVLNKVVEALCRSKLVEEAEHVVLKLKNWVKPNEVTYRWLIYGFCDVGDVIEASKI WNLMVDEGFEPEIASIETMIEILFKNNRYVEALKVFQSVRVNRMSELGVSTYRLVISWLC KKGKLGESYLVFEEMEKRGIKADNLTLGSITYGLMSRGRVMEAYRVVEGIEKPDISVYHG MIKGLLKLKRASEATEVFREMIKRGCEPIMHTYVMLLQGHLGRRGRKGSDPLVNFDTIFV GGLVKAGKTLEANKYAERLLYRKVEVPRFDYNKFLHYYSNEEGVVMFEVMSNKLREVGQF DLADIFARYGERMATRDRRRIRTTES*

Transcript Sequence

Transcript ID	Solyc04g005425.1.1
Transcript Infomation	Pentatricopeptide repeat (PPR) superfamily protein (AHRD V3.3 *** A0A061EBH5_THECC)
Sequence	ATGCTAGATGTGATTGGAAAATCAAGAAACATTGACCTTTTCTGGGAAGTGATTCAAGAA ATTGGAAGGTGTCAGTTGGTCACCCCTAAGACTTATGTAGTTGGGGTGAAAACTCTGGCT TCAGCTAGGGAGTTGAAGAAATGTGTTGGAGTATTTCATTTGATGAATGGATATGGATAT GGGTATAGTCTTGATGTATTGAATAAGGTAGTTGAAGCTCTTTGTAGATCTAAGCTTGTT GAGGAGGCTGAGCATGTTGTATTGAAGTTGAAAAATTGGGTAAAACCAAATGAGGTTACT TATAGATGGTTGATTTACGGGTTTTGTGATGTTGGTGATGTGATTGAAGCTTCAAAGATT TGGAATTTAATGGTGGATGAAGGTTTTGAACCTGAAATTGCGTCGATTGAGACTATGATT GAGATCCTTTTCAAGAATAATCGATATGTTGAAGCATTGAAGGTTTTTCAATCTGTTAGA GTAAATAGGATGAGTGAATTAGGGGTTTCGACTTATAGGTTGGTGATCAGTTGGTTGTGC AAGAAAGGGAAGCTTGGAGAGAGTTACTTGGTGTTTGAAGAAATGGAAAAGAGAGGGATT AAGGCGGATAATCTTACATTAGGATCGATTACGTATGGGCTTATGAGTAGAGGACGAGTT ATGGAAGCGTATAGGGTTGTGGAAGGAATAGAGAAGCCCGATATAAGTGTTTATCACGGG ATGATCAAGGGGTTGTTGAAATTGAAAAGAGCAAGTGAAGCAACTGAGGTATTTAGGGAG ATGATTAAAAGGGGATGTGAGCCGATAATGCATACGTATGTCATGTTGTTACAAGGGCAT TTAGGGAGGAGAGGGAGGAAAGGATCAGATCCTCTTGTGAATTTTGATACCATCTTCGTA GGAGGTTTGGTAAAGGCAGGGAAAACGTTGGAGGCAAACAAATATGCAGAGAGATTACTG TACAGGAAAGTTGAGGTGCCTAGGTTTGATTATAACAAGTTTTTGCATTATTATTCCAAT GAGGAAGGGGTTGTTATGTTTGAGGTGATGAGCAACAAACTTAGAGAAGTTGGGCAATTC GATTTAGCTGATATATTTGCAAGGTATGGGGAGAGAATGGCAACTAGGGATAGGAGGAGA ATTAGAACAACAGAGTCATAA