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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g005120.3.1
CDS Infomation

short hypocotyl in white light1 (AHRD V3.3 *-* AT1G69935.1)
Sequence

ATGGCGGGAGCTGCCGTACTGCGATTATCATCACTATCTTCCTTGAGATTATACTCAATA
ACTTCATCTTCTCCAATTTCTCACTTGTTAGCTCTCCCTTTACGAAAACCCAGATTCACA
ATTTGCCATGCCAAGTTTGATGGATCGATTGGAGAAGCAGCTGAAAGGATGTACCGAATG
AATTTTGAAGATGATGAATTATTGGAGGAGGATGAAGAGAACGATGAGGAAGAGGAGACG
GAGAGCAGTATTGACTTACTAGTTAGATTTGTGCAGAGTATGTTCACAAAGGTTTCTAAG
CGTGCTAGGAAAGCTACTCGCTCTATACTGCCGGACGTCATTTCTCCACAGCTTGTAACT
TTTGCAGTTGATGGCGTTCTAATTTTGGCTTTACTCTCCATCTTGAAGGCATTTCTTGAG
GTGGTCTGCTCACTTGGTGGTGCCGTCTTTGTAGCAATTCTGTTATTACGTGTGCTCTGG
TCGGCTGTTTCCTACTTTCAGTCTAACGGTTCAGATTTCAACAGTGCTGGAAGTTCATAT
GGCAGAACACGACCCGCTGCATGA

Peptide Sequence

PEP ID

Solyc04g005120.3.1
PEP Infomation

short hypocotyl in white light1 (AHRD V3.3 *-* AT1G69935.1)
Sequence

MAGAAVLRLSSLSSLRLYSITSSSPISHLLALPLRKPRFTICHAKFDGSIGEAAERMYRM
NFEDDELLEEDEENDEEEETESSIDLLVRFVQSMFTKVSKRARKATRSILPDVISPQLVT
FAVDGVLILALLSILKAFLEVVCSLGGAVFVAILLLRVLWSAVSYFQSNGSDFNSAGSSY
GRTRPAA*

Transcript Sequence

Transcript ID

Solyc04g005120.3.1
Transcript Infomation

short hypocotyl in white light1 (AHRD V3.3 *-* AT1G69935.1)
Sequence

GTATATATGACGAAACTAATATTCAAACGTTGTATCAAATTTTAAAGGGACGACGAATCA
ATCTTATCAGAAATTGAATGGCGGGAGCTGCCGTACTGCGATTATCATCACTATCTTCCT
TGAGATTATACTCAATAACTTCATCTTCTCCAATTTCTCACTTGTTAGCTCTCCCTTTAC
GAAAACCCAGATTCACAATTTGCCATGCCAAGTTTGATGGATCGATTGGAGAAGCAGCTG
AAAGGATGTACCGAATGAATTTTGAAGATGATGAATTATTGGAGGAGGATGAAGAGAACG
ATGAGGAAGAGGAGACGGAGAGCAGTATTGACTTACTAGTTAGATTTGTGCAGAGTATGT
TCACAAAGGTTTCTAAGCGTGCTAGGAAAGCTACTCGCTCTATACTGCCGGACGTCATTT
CTCCACAGCTTGTAACTTTTGCAGTTGATGGCGTTCTAATTTTGGCTTTACTCTCCATCT
TGAAGGCATTTCTTGAGGTGGTCTGCTCACTTGGTGGTGCCGTCTTTGTAGCAATTCTGT
TATTACGTGTGCTCTGGTCGGCTGTTTCCTACTTTCAGTCTAACGGTTCAGATTTCAACA
GTGCTGGAAGTTCATATGGCAGAACACGACCCGCTGCATGATTGAGCCTAGTCACATACC
TTTCATCTGGTGAATCATTAATTCCTTAAAAAACAAAAGATGTTATTAGAACTAGAATGT
TCTGTAAGTAATAGTGACTTAATTTGGCAATGTGAATTTTACATGTTTGAAGATCTCAGC
AGATCTTATAGGGAGTAGAGTGTGTTTATAAGGTTTCTTTTTGACTTCATTAGCCTTCTT
CCCGTGCTTGGGAATCTTCTATAATGAATAGTTAAGAGTCTTAACTCTTAACACACCACT
TATAATTTGAGCTATATATAATACTCATGTTGTCGCAGCACACTAAC