Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc04g005020.3.1
CDS Infomation

Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A061FTT2_THECC)
Sequence

ATGGGATTTCTTCCATGTTCTTTGCTTTGTCAAGCAAAGAAAAAACCATTAGATTCTTGT
GATCAAACTGAGTCTAGACATCTTTCCTCAAATTCTTCATCATCATTAATATCATTATCC
TCGAGATCATTATCATTATCATCTAGGTCATTTTCTTCACAGCCAAGTTTACCATCAATT
CCTTCTCTTTCTATATCATCCTCTCAAGTTGAACATCTCTCAAACACCTTCCACCACTGC
TTAGCCACACTAACAGGCCATTCTTCCTACATATTTTGCCTATCCATCGCGGAAAAACAC
CTCTATTATGGCTCTTCCAATGGAGAAATCCTTGTATGTGACATAAACTCTTCAAAACAG
GACAATTGTTTAAAAGAAAAGACAGTATGCCAAAGTGGAAGTGCAATCAAATCTATTGTC
ATGATGGGAGATAAGCTCTTCAGTTCCCACCAAGATCATAAAATCCGAGTATGGAAAATT
GACAATGAGACACCTAATAGAAATTACAAGAGCATTGCCACCTTACCAACGATCAACGAT
CGTTGCGTGAAGCTATTTTGGACAAGGAACTACGTACAAGTTCGAAGACACAAGAAATGC
ACATGGGTACATCACGTAGACACGGTGTCAGCATTAGCCTTATCGAAAGATGGCTCTCTG
CTTTACTCTGCTTCATGGGACAGAACATTTAAGATTTGGAGAAGTTCAGATTTCAAATGC
CTAGAATCAGTATGGAATGCACATGACGACGCGATCAACTCAATAGTTGTATCGAATAAT
GGAGATGTTTACACTGGTTCAGCAGACAAGAAGATCAAAATATGGACTAAACAACAAGAA
GGGGGTTCTAATAAACACACTCTTATGACTGCACTAGAGAAGCATAAATCAGCAGTGAAT
GCTTTGGCTCTTAGTAGAGATGGTTGTGTTTTATACTCTGGTGCTTGTGATAGGTCTATA
ATTGTGTGGGAGAAATTGCAAGTGTTAGGGGCAATAAGAGGACATAAAAAATCAATTTTG
TGTTTGGCTGTGGTGTCAAATGATTTGTTATGTAGTGGATCAGCTGATAAAACAGTGAGA
ATATGGAAAAGAGGATTAGGAAAATTTTGTTATTCATGTTTGGCTGTGTTTGAAGGACAT
AGAGGTCCAGTTAAGTGTTTGAATGCAACTTTAGATACTCAAAAGTATGATGATAATGAT
TCTTGTTCTGGAAATTCTTACATCATTTATAGTGGTAGCTTGGATTGTGATGTTAAGGTT
TGGAAACTTTGGGTTCCTAATTACCTCTAG

Peptide Sequence

PEP ID

Solyc04g005020.3.1
PEP Infomation

Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A061FTT2_THECC)
Sequence

MGFLPCSLLCQAKKKPLDSCDQTESRHLSSNSSSSLISLSSRSLSLSSRSFSSQPSLPSI
PSLSISSSQVEHLSNTFHHCLATLTGHSSYIFCLSIAEKHLYYGSSNGEILVCDINSSKQ
DNCLKEKTVCQSGSAIKSIVMMGDKLFSSHQDHKIRVWKIDNETPNRNYKSIATLPTIND
RCVKLFWTRNYVQVRRHKKCTWVHHVDTVSALALSKDGSLLYSASWDRTFKIWRSSDFKC
LESVWNAHDDAINSIVVSNNGDVYTGSADKKIKIWTKQQEGGSNKHTLMTALEKHKSAVN
ALALSRDGCVLYSGACDRSIIVWEKLQVLGAIRGHKKSILCLAVVSNDLLCSGSADKTVR
IWKRGLGKFCYSCLAVFEGHRGPVKCLNATLDTQKYDDNDSCSGNSYIIYSGSLDCDVKV
WKLWVPNYL*

Transcript Sequence

Transcript ID

Solyc04g005020.3.1
Transcript Infomation

Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A061FTT2_THECC)
Sequence

AACTTCTTCCTCTTCCTTACAAAGGAAAAAAAAATGGGATTTCTTCCATGTTCTTTGCTT
TGTCAAGCAAAGAAAAAACCATTAGATTCTTGTGATCAAACTGAGTCTAGACATCTTTCC
TCAAATTCTTCATCATCATTAATATCATTATCCTCGAGATCATTATCATTATCATCTAGG
TCATTTTCTTCACAGCCAAGTTTACCATCAATTCCTTCTCTTTCTATATCATCCTCTCAA
GTTGAACATCTCTCAAACACCTTCCACCACTGCTTAGCCACACTAACAGGCCATTCTTCC
TACATATTTTGCCTATCCATCGCGGAAAAACACCTCTATTATGGCTCTTCCAATGGAGAA
ATCCTTGTATGTGACATAAACTCTTCAAAACAGGACAATTGTTTAAAAGAAAAGACAGTA
TGCCAAAGTGGAAGTGCAATCAAATCTATTGTCATGATGGGAGATAAGCTCTTCAGTTCC
CACCAAGATCATAAAATCCGAGTATGGAAAATTGACAATGAGACACCTAATAGAAATTAC
AAGAGCATTGCCACCTTACCAACGATCAACGATCGTTGCGTGAAGCTATTTTGGACAAGG
AACTACGTACAAGTTCGAAGACACAAGAAATGCACATGGGTACATCACGTAGACACGGTG
TCAGCATTAGCCTTATCGAAAGATGGCTCTCTGCTTTACTCTGCTTCATGGGACAGAACA
TTTAAGATTTGGAGAAGTTCAGATTTCAAATGCCTAGAATCAGTATGGAATGCACATGAC
GACGCGATCAACTCAATAGTTGTATCGAATAATGGAGATGTTTACACTGGTTCAGCAGAC
AAGAAGATCAAAATATGGACTAAACAACAAGAAGGGGGTTCTAATAAACACACTCTTATG
ACTGCACTAGAGAAGCATAAATCAGCAGTGAATGCTTTGGCTCTTAGTAGAGATGGTTGT
GTTTTATACTCTGGTGCTTGTGATAGGTCTATAATTGTGTGGGAGAAATTGCAAGTGTTA
GGGGCAATAAGAGGACATAAAAAATCAATTTTGTGTTTGGCTGTGGTGTCAAATGATTTG
TTATGTAGTGGATCAGCTGATAAAACAGTGAGAATATGGAAAAGAGGATTAGGAAAATTT
TGTTATTCATGTTTGGCTGTGTTTGAAGGACATAGAGGTCCAGTTAAGTGTTTGAATGCA
ACTTTAGATACTCAAAAGTATGATGATAATGATTCTTGTTCTGGAAATTCTTACATCATT
TATAGTGGTAGCTTGGATTGTGATGTTAAGGTTTGGAAACTTTGGGTTCCTAATTACCTC
TAGCTAGGATTCATCTCTTTCATATGTACTAATAGGAACATATTGTAAATATAAAAAGAG
GACTATTCTCACTTAATTTTCTGTCTCTCTTTTTAGTTAGAAAGTCCCACCATGGCTAAA
TGACAGAG