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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g123960.3.1
CDS Infomation

Mediator of RNA polymerase II transcription subunit 8, putative (AHRD V3.3 *** G7JYQ3_MEDTR)
Sequence

ATGGAAGGAGTAGTGGCAGCTCAAGATCAGCAACAGCAACAGCCACAGCCGCCCAGGGTG
GTGGAGGGTCTGAACCCCGCTGTTCAACAACAACTGAATCTCGAATCCGTTAAAACTCGA
GCCGTTAGTTTGTTCAAGGCTATTTCTCGCATCCTCGAAGACTTCGACGCTATCGCTCGC
ACCAATGCTGTCCCCAAATGGCAAGATATTTTGGGGCAATTTTCTATGGTGAATCTTGAG
CTTTATAACATTGTTGAAGATATTAAGAAGGTCTCCAAGGCTTTTGTTGTTCACCCCAAG
AATGTAAATGCTGAGAATGCTGCAATTCTACCTGTTATGCTGTCATCAAAGCTGCTGCCA
GAGATGGAAGTCGAAGATAATGCCAAAAGGGAGCAATTATTACACAGCATGCAACACCTA
TCGGTAGCATCCCAAATTGAGAAGTTGAAGGTTAGAATTGATATGATTGGAGCAGCATGT
GAAAGTGCTGAGAAAGTCATAGCTGATACGCGCAAAGCCTACTTTGGAACCAGACAGGGG
CCAACACTGCTTCCAACTATTGACAAGGCACAAGCAGCAAAAATTCAGGAACAAGAAAAT
TTACTTCGCACTGCAGTAAATCATGGTGAAGGATTACGTGTACCTGGAGACCAAAGGCAT
ATTACTTCTGCACTTCCTGGTCATTTGGTAGATGTGCTTACAGTGTCTGATGGCCCCCAG
TCTTTCGCTGATTCATCCGGGACTTATCTGAAGAATACTCCTCCCTTTCCATCGAGCAAT
GTTAATAGTCAGGGAGCTTTGTTACAGGCTTCTGGAGCACTTCGGGCTGCAGTTTCTCCT
TCTGGGCCCACTTCCTTTGATACTACAACAGCATCACCTCTGCAACATGTCAACTCACCT
AGGTCTAGTGCTAACATGATGAATACACCATCTCCTCAGCAACAGACCCATCAGCAACAG
CAGCAGCAACAGCAGCAGCAGCAGTTGCAGCAGCATCAGCTCCAACAGAGGCAGAAAATG
CTGCAGTTACCTCAGCATCAGCAGCAAATTCTTGCCCAACAGCAACTTAGGCAAGCCTCA
ATGCCTGGACTGGGGCAGCTGCATGGTCAGCCACAGATGCAGTTCTCTCAGCCACTGGGA
GCACAGCAGTTTCAAGGTAGGCAGCTACCATCTGGTGCCCTTCATCACGGTATGGGTCAA
AGTCAGCTCAACCAAGGAAATCAGCTGAATCGACATTTAAACCAGTTTTCTAGTCCTATG
AATACTGCACTATTCAATTCTGCCCAAAGCACACCTAGCTCTCAGATGATCTCAAATATG
TCAGCAATGGTGCCATCACAAACTCTTCTGCCACGAATGCAGTTTGGAATGTCTGGTGGA
ACTCGGAATCTTGCTGCTGCAAACCTGAGTGATCAAATGTTCAATATGGGAGGAAACAAT
CCTGGTATGATGTCAATCCAACAGCAGCAGCATGGCACATTTGGAAACATGTCACAAAAT
ACACAGAATCTGCAGCAGGGTATGATGCCTCTTCAGAACGCACCTCAGACCCACCCTTCC
TTTCAGCAACAAAGACCACAAGGCCAACAGTGA

Peptide Sequence

PEP ID

Solyc03g123960.3.1
PEP Infomation

Mediator of RNA polymerase II transcription subunit 8, putative (AHRD V3.3 *** G7JYQ3_MEDTR)
Sequence

MEGVVAAQDQQQQQPQPPRVVEGLNPAVQQQLNLESVKTRAVSLFKAISRILEDFDAIAR
TNAVPKWQDILGQFSMVNLELYNIVEDIKKVSKAFVVHPKNVNAENAAILPVMLSSKLLP
EMEVEDNAKREQLLHSMQHLSVASQIEKLKVRIDMIGAACESAEKVIADTRKAYFGTRQG
PTLLPTIDKAQAAKIQEQENLLRTAVNHGEGLRVPGDQRHITSALPGHLVDVLTVSDGPQ
SFADSSGTYLKNTPPFPSSNVNSQGALLQASGALRAAVSPSGPTSFDTTTASPLQHVNSP
RSSANMMNTPSPQQQTHQQQQQQQQQQQLQQHQLQQRQKMLQLPQHQQQILAQQQLRQAS
MPGLGQLHGQPQMQFSQPLGAQQFQGRQLPSGALHHGMGQSQLNQGNQLNRHLNQFSSPM
NTALFNSAQSTPSSQMISNMSAMVPSQTLLPRMQFGMSGGTRNLAAANLSDQMFNMGGNN
PGMMSIQQQQHGTFGNMSQNTQNLQQGMMPLQNAPQTHPSFQQQRPQGQQ*

Transcript Sequence

Transcript ID

Solyc03g123960.3.1
Transcript Infomation

Mediator of RNA polymerase II transcription subunit 8, putative (AHRD V3.3 *** G7JYQ3_MEDTR)
Sequence

CATATAAATGCGTAATGAAAATTGCGGTTGAAGAGGGTTGGCGACCATGGAAGGAGTAGT
GGCAGCTCAAGATCAGCAACAGCAACAGCCACAGCCGCCCAGGGTGGTGGAGGGTCTGAA
CCCCGCTGTTCAACAACAACTGAATCTCGAATCCGTTAAAACTCGAGCCGTTAGTTTGTT
CAAGGCTATTTCTCGCATCCTCGAAGACTTCGACGCTATCGCTCGCACCAATGCTGTCCC
CAAATGGCAAGATATTTTGGGGCAATTTTCTATGGTGAATCTTGAGCTTTATAACATTGT
TGAAGATATTAAGAAGGTCTCCAAGGCTTTTGTTGTTCACCCCAAGAATGTAAATGCTGA
GAATGCTGCAATTCTACCTGTTATGCTGTCATCAAAGCTGCTGCCAGAGATGGAAGTCGA
AGATAATGCCAAAAGGGAGCAATTATTACACAGCATGCAACACCTATCGGTAGCATCCCA
AATTGAGAAGTTGAAGGTTAGAATTGATATGATTGGAGCAGCATGTGAAAGTGCTGAGAA
AGTCATAGCTGATACGCGCAAAGCCTACTTTGGAACCAGACAGGGGCCAACACTGCTTCC
AACTATTGACAAGGCACAAGCAGCAAAAATTCAGGAACAAGAAAATTTACTTCGCACTGC
AGTAAATCATGGTGAAGGATTACGTGTACCTGGAGACCAAAGGCATATTACTTCTGCACT
TCCTGGTCATTTGGTAGATGTGCTTACAGTGTCTGATGGCCCCCAGTCTTTCGCTGATTC
ATCCGGGACTTATCTGAAGAATACTCCTCCCTTTCCATCGAGCAATGTTAATAGTCAGGG
AGCTTTGTTACAGGCTTCTGGAGCACTTCGGGCTGCAGTTTCTCCTTCTGGGCCCACTTC
CTTTGATACTACAACAGCATCACCTCTGCAACATGTCAACTCACCTAGGTCTAGTGCTAA
CATGATGAATACACCATCTCCTCAGCAACAGACCCATCAGCAACAGCAGCAGCAACAGCA
GCAGCAGCAGTTGCAGCAGCATCAGCTCCAACAGAGGCAGAAAATGCTGCAGTTACCTCA
GCATCAGCAGCAAATTCTTGCCCAACAGCAACTTAGGCAAGCCTCAATGCCTGGACTGGG
GCAGCTGCATGGTCAGCCACAGATGCAGTTCTCTCAGCCACTGGGAGCACAGCAGTTTCA
AGGTAGGCAGCTACCATCTGGTGCCCTTCATCACGGTATGGGTCAAAGTCAGCTCAACCA
AGGAAATCAGCTGAATCGACATTTAAACCAGTTTTCTAGTCCTATGAATACTGCACTATT
CAATTCTGCCCAAAGCACACCTAGCTCTCAGATGATCTCAAATATGTCAGCAATGGTGCC
ATCACAAACTCTTCTGCCACGAATGCAGTTTGGAATGTCTGGTGGAACTCGGAATCTTGC
TGCTGCAAACCTGAGTGATCAAATGTTCAATATGGGAGGAAACAATCCTGGTATGATGTC
AATCCAACAGCAGCAGCATGGCACATTTGGAAACATGTCACAAAATACACAGAATCTGCA
GCAGGGTATGATGCCTCTTCAGAACGCACCTCAGACCCACCCTTCCTTTCAGCAACAAAG
ACCACAAGGCCAACAGTGAAGTATCTAAGATTAGATGGAAGAGGAGGATATTTATACCAA
ACCTCAACATTTCCTAACTTTGTTTGATCTTTAAAAAAAAAATGTGAAGGCCAGATTCTT
GCAGGAAATTTTTGTTGGAACATTACATTTGTTAAAAGAAGATTGTAAAATTACGTGCCT
TGTACATTATTCAGTCGTAAATGTAAATCAGAAGATGATTGTTTGCTATTCCACATCTTT
TTTTAATATGCTCTAGTTGGTGTCTCAATTTGTGAGTACAAGAAATGAAAGAGGGTGTAT
ACTGAGCCATTTGACTTATTACATGAGTCTTTTTCTGGTTGAAAAAGAAGTGCAGCATCT
GTTAAGGAACCATCTCAACCTGAGCAAGCAAAAACAATAAATTTTAGTTTTTAAAGGAAA
GTAGATGGTAAATGTGGGTGGGGAAAAAGAAGGTTGCTTACAAGTGTAAAAGGCAGGAGG
AGCATCTGTGATAATGATGATGAGGTTGGAGTTGGTGATGTAGTGAAAATGGGGGATGAG
GGGATGAGGGTGGTGAGAATGGTGGGGAAGGAGATGAAGAGAAATAGTAATGGTGATGTG
CAGGGCCGACACTCACCGGAAGTGGGGATCGGGGAGTTGAGGACGAGGACGGA