Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g123910.3.1
CDS Infomation

Kelch repeat-containing protein family (AHRD V3.3 *** A0A151RPA1_CAJCA)
Sequence

ATGAGAATAGGGAAGGCAACTAGTAGCAGCACCACCAAGCTGGTCTTTCTTTGTGTGGCT
CTCTTGGGAACCTTTCTTCTTGTAGATCTGCTCTGGGCTTCTTCCTCCTCCTTCAATTGG
CCACTCCCACCATCATCCAATCTTCTCTTCTTTCCTAATAACACGCTACCCATATCTAAC
AAAAAAGGAGGAGATGCCAGGATTTTATCGGCTACCTTTGCCGATTTGCCTGCCCCGCTA
CTGAACTGGGAGAAGATGGCACCATCACCTGTACCTCGTCTTGACGGCGCTGCACTACAG
ATCAACGACCTTCTTTTCGTCTTTGCTGGTTATGGAACCATTGATCATGTTCACTCGCAT
GTCGATATTTACAATTTCACCGCCAACTCATGGGGAGGAACATTTGATATGCCCAAAGAA
ATGGCTCATTCACACTTGGGTATGGTAACTGATGGGAGATACATTTATGTGGTTACTGGA
CAATACGGTCCCCAGTGCCGGGGTCCTACTGCCCGCAATTTTGTTCTTGACACCAAAACC
AAGCAATGGCAGGACTTGCCTCCTTTACCACTCCCAAGGTATGCGCCTGCAACACAGCTC
TGGAGAGGCAGGCTTCATGTCATGGGTGGGAGCAAAGAGAATCGGCATACCCCAGGATTA
GAGCATTGGAGTATTGCTGTTAAAGATGGAAAAGCTTTAGAAACGGAGTGGCGGGCTGAG
ATACCTATTCCTCGTGGTGGACCTCACAGGGCCTGTGTTGTGTTTGATGACCGACTTTAT
GTCTTTGGTGGTCAAGAGGGTGATTTTATGGCTAAACCTGGATCACCTATTTTCAAATGC
TCACGTAGAAATGAGGTCGTATATGATGATGTTTACATGTTAGATGACGATATGACATGG
AAAGTGTTAACTCCCATGCCAAAGCCAGATTCCCATATAGAGTTTGCTTGGGCTATTGTC
AATAGGTCTCTTGTGATTGTTGGAGGAACTACTGAGAAGCACCCAAATACCAAAAAGATG
ACCCTTGTTGGAGAAATCCTCCAATTTCAATTCGATACACAGACATGGAAAGTTTTAGGC
AAACTTCCTTACCGTGTAAAAACAACACTTGTTGGATTCTGGAACGGGTGGTTGTACTTC
ACATCAGGACAAAGAGACAAAGGACCAGATGATCCATCACCAAGGAAGGTCATTGGAGAG
ATGTGGAGAACTAAACTAAAGTTGTTATGA

Peptide Sequence

PEP ID

Solyc03g123910.3.1
PEP Infomation

Kelch repeat-containing protein family (AHRD V3.3 *** A0A151RPA1_CAJCA)
Sequence

MRIGKATSSSTTKLVFLCVALLGTFLLVDLLWASSSSFNWPLPPSSNLLFFPNNTLPISN
KKGGDARILSATFADLPAPLLNWEKMAPSPVPRLDGAALQINDLLFVFAGYGTIDHVHSH
VDIYNFTANSWGGTFDMPKEMAHSHLGMVTDGRYIYVVTGQYGPQCRGPTARNFVLDTKT
KQWQDLPPLPLPRYAPATQLWRGRLHVMGGSKENRHTPGLEHWSIAVKDGKALETEWRAE
IPIPRGGPHRACVVFDDRLYVFGGQEGDFMAKPGSPIFKCSRRNEVVYDDVYMLDDDMTW
KVLTPMPKPDSHIEFAWAIVNRSLVIVGGTTEKHPNTKKMTLVGEILQFQFDTQTWKVLG
KLPYRVKTTLVGFWNGWLYFTSGQRDKGPDDPSPRKVIGEMWRTKLKLL*

Transcript Sequence

Transcript ID

Solyc03g123910.3.1
Transcript Infomation

Kelch repeat-containing protein family (AHRD V3.3 *** A0A151RPA1_CAJCA)
Sequence

ATTTAAGATTTTTGTCATCCTATAACCAAATTATTAATAATGAAGTAGAGGAGATTTGGT
GAGATCTGGGGTGGGCAATGAGATGAGAATAGGGAAGGCAACTAGTAGCAGCACCACCAA
GCTGGTCTTTCTTTGTGTGGCTCTCTTGGGAACCTTTCTTCTTGTAGATCTGCTCTGGGC
TTCTTCCTCCTCCTTCAATTGGCCACTCCCACCATCATCCAATCTTCTCTTCTTTCCTAA
TAACACGCTACCCATATCTAACAAAAAAGGAGGAGATGCCAGGATTTTATCGGCTACCTT
TGCCGATTTGCCTGCCCCGCTACTGAACTGGGAGAAGATGGCACCATCACCTGTACCTCG
TCTTGACGGCGCTGCACTACAGATCAACGACCTTCTTTTCGTCTTTGCTGGTTATGGAAC
CATTGATCATGTTCACTCGCATGTCGATATTTACAATTTCACCGCCAACTCATGGGGAGG
AACATTTGATATGCCCAAAGAAATGGCTCATTCACACTTGGGTATGGTAACTGATGGGAG
ATACATTTATGTGGTTACTGGACAATACGGTCCCCAGTGCCGGGGTCCTACTGCCCGCAA
TTTTGTTCTTGACACCAAAACCAAGCAATGGCAGGACTTGCCTCCTTTACCACTCCCAAG
GTATGCGCCTGCAACACAGCTCTGGAGAGGCAGGCTTCATGTCATGGGTGGGAGCAAAGA
GAATCGGCATACCCCAGGATTAGAGCATTGGAGTATTGCTGTTAAAGATGGAAAAGCTTT
AGAAACGGAGTGGCGGGCTGAGATACCTATTCCTCGTGGTGGACCTCACAGGGCCTGTGT
TGTGTTTGATGACCGACTTTATGTCTTTGGTGGTCAAGAGGGTGATTTTATGGCTAAACC
TGGATCACCTATTTTCAAATGCTCACGTAGAAATGAGGTCGTATATGATGATGTTTACAT
GTTAGATGACGATATGACATGGAAAGTGTTAACTCCCATGCCAAAGCCAGATTCCCATAT
AGAGTTTGCTTGGGCTATTGTCAATAGGTCTCTTGTGATTGTTGGAGGAACTACTGAGAA
GCACCCAAATACCAAAAAGATGACCCTTGTTGGAGAAATCCTCCAATTTCAATTCGATAC
ACAGACATGGAAAGTTTTAGGCAAACTTCCTTACCGTGTAAAAACAACACTTGTTGGATT
CTGGAACGGGTGGTTGTACTTCACATCAGGACAAAGAGACAAAGGACCAGATGATCCATC
ACCAAGGAAGGTCATTGGAGAGATGTGGAGAACTAAACTAAAGTTGTTATGAGCTCATAG
TTTTTTCTGCCTAATATAGAAATGTTATTGTGTAAATTAATGCAAGTTTTGTTTCTTTGT
TATTCTTCTCATTTTTCTTTGTTTGTTGAAACTTGAAAGTGACTAGGAAAGAAATAAGAG
ATTTAGTTTACACTTCTAAGTAGACAATTCAAAATACATGAATATGGAATTTGCGAGCAT
TAACCAATTAAATTTATACTA