Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc03g123890.3.1
CDS Infomation	Calcium-transporting ATPase (AHRD V3.3 *** A0A022PY01_ERYGU)
Sequence	ATGGACCTGGAAGCCGGCTCCTCCCATCTCAACTCTTCTCCCCAACACCACTTCTCTGAT CTTTTCCACATTCCCAATACCAAGAATGTATCTTTCCACGCTCTTAAACGCTGGAGGGAA GCTGCACTTGTGCTTAATGCTTCACGCCGATTTAGGTATACTCTCGACTTGAGAAAAGCC CAAGAGAAAGAACAAAGAAGAAGGATGATCAGAGCACATGCTCAAGTCATAAGAGCCGCA CTACTTTTTAAACTTGCTGGACAACGAGCTATTGTGTTGGGTACCGAAGTTGCTCCTCTA CCTCCTCGTGGTGACTATGGAATTTCACTTGAACAGCTAGCTTCAGTGACTAGGGATCAC AATCTTTCTGCACTGCAACAATACGGAGGAGCCAAAGGCTTATCAGAGAAGTTGAAAACA GATGTTGATTCAGGAATTGCTGATGATGATATTGAATTGTCAAAAAGAAAAAATGTATTT GGGGCAAATACGTATCCCATGAAAAAGGGTCGCAGTTACTTGAGATTCCTTTGGGAGGCT TGGCAAGATCTGACTCTCATCATCTTAATTGTAGCTGCTGTACTATCACTGGCACTTGGA ATACACACAAAGGGCCTGAAAGAAGGATGGTATGATGGTGGAAGCATAACTTTTGCCGTA CTTCTTGTTATTTTTGTAACAGCAACAAGTGACTACAGACAGTCCTTGCGATTTCAGAAC TTAAATGAAGAAAAACGAAATATCCAAGTAGAGGTTATAAGAGACGGCAGAAGGGATAAA ATTTCAATATACGAAATTGTTGTTGGTGATTTTGTTCCTCTCAGGATAGGCGATCAGGTT CCTGCAGATGGAGTCTTGATCTCTGGTCATTCTCTGGCAATTGATGAGTCTAGCATGACT GGTGAAAGCAAGATTGTAAACAAAAATCAAAAGGCACCTTTCTTGATGGCTGGTTGCAAG GTAGCAGATGGTGCTGGAACCATGCTTGTAACTGGTGTAGGAATCAATACTGAATGGGGA TTGTTGATGGCGAGTATATCAGAGGATACTGGTGAAGAAACTCCTTTGCAGGTGCGTTTG AATGGGGTTGCCACCTTTATCGGCATTGTTGGCCTTGCTGTTGCTCTCTTTGTGCTCATT GTTCTTTTGAGCAGGTTCTTCACTGGGCATAGCAAAAATCCAGATGGGACTACCCAGTTT GTTCATGGACAGACCAGTGTTGGTAAAACAATGGATGGAGTTGTACATATCATCACTGCA GCTGTCACAATTGTGGTTGTTGCTGTCCCTGAAGGTCTTCCTTTAGCTGTTACATTGACT TTAGCATGCTCAATGAAGAAAATGATGGCTGACAAGGCTTTGGTGCGCAGACTTTCAGCT TGTGAAACTATGGGCTCTGCTACAACTATTTGTAGTGATAAAACTGGAACACTGACTCTG AATCAGATGACAGTCGTAGAAGCCTATGTCGGGAAAAAGAAGCTCGACTCACCTGAAGAT GGTTCACAGTTGCATTCAGCTGTTTCTTCTCTTCTGGATGAGGGCATAACTCAGAATACA TCTGGCAGTGTCTTTACTTCTAAGGATGGCAAGGGAACAGAGGTTTCAGGCTCTCCCACT GAAAAAGCCATTCTTTCATGGGGCGTCAAGATTGGAATGAAGTTCGATGTTGTCAGATCA CAATCCATAGTTCTTCATGTCTCTCCTTTTAATTCTACAAAGAAGAGAGGAGGTGTTGTA GTTAGAGAGCAGAGTGGCTCTCAAGTTCATATGCATTGGAAAGGTGCAGCTGAAATTATA CTGGCATCTTGTACTGGATACCTTGATTCAAATGGCTGCTTGCAATCCATTGAAAAGGAG AAGGATTTTTTGAAAGAAGCCATTGAAGATATGGCAGCAAAAAGTTTGAGGTGTGTTGCC ATTGCATACCAAACTTGTAATGTGAATGAGGTTCCAACTGATGAAGAACAACTGGCTCAA TGGATTCTACCAGAAGATGACCTTATTTTGCTTGCTATACTCGGTATAAAGGATCCTTGT CGTCCAGGTGTCAAAGATGCAGTGAGACAGTGCAGTGATTCTGGTGTTAAGGTGCGGATG GTAACTGGAGATAATATTCAAACAGCTAGAGCAATTGCCTTGGAGTGTGGAATTTTAAGT TCAAATACTGAAGTCACAGAATTTGAAGTTATTGAGGGGAAAACCTTCCGTGAGTTGTCT GAGAAGGAGAGAGAACAAGTTGCAAACAGAATGTCGGTTATGGGAAGGTCATCACCAAGT GACAAGCTTTTGCTTGTGCAAACTCTGCGTAAACTAGGGGAAGTCGTTGCTGTTACTGGA GATGGAACTAATGATGCTCCTGCACTGCATGAGGCCGACATAGGCCTTTCCATGGGCATC CAAGGAACAGAAGTCGCAAAAGAAAGCTCTGACATCATTATCTTGGATGATAATTTTGCT TCAGTAGTGAAGGTTGTACGCTGGGGTCGTTCTGTTTATGCAAATATTCAGAAATTCATT CAGTTCCAGCTCACTGTTAATGTCGCAGCTCTTGTAATCAATGTTGTGGCAGCAGTTTCT TCTGGTGATGTTCCTCTAAACACAGTGCAGCTTCTTTGGGTCAATCTCATTATGGATACT CTGGGAGCACTAGCTTTGGCTACTGAACCACCAACTGACCATCTTATGCATAGACCTCCT GTTGGTCGAAGGGAACCTCTGGTGACAAATATCATGTGGAGGAACTTGCTTATTCAGGCT CTCTACCAAATCGGAATCCTTCTTCTACTCAATTTCCAGGGCAAGAGCATTCTCAGCTTA GAGAATGATGACCCAAAACATGCTAATATGGTGAAGAATACCTTAATTTTCAATGCATTT GTTTTCTGCCAAATATTCAATGAGGTTAATGCTCGAAAGCCAGATGAAATGAATGTCTTT ACTGGCGTGACCAAAAATCCCCTCTTTACTGGGGTTGTGGGAACTACTTTTATACTTCAG ATCATTATCATTGAGTTACTTGGAAAATTTACGTCGACGGTTGGACTGAGTTGGAAATTA TGGATGGTTTCACTTGTCATTGGTATTATCAGTTGGCCTCTTGCTGCTGCGGGAAAATTG ATCCCAGTTCCAAAGACCCCTGTGGCTAAGGTCTTCATCAAGTTATATCAGCGATGCATT GCATAA

Peptide Sequence

PEP ID	Solyc03g123890.3.1
PEP Infomation	Calcium-transporting ATPase (AHRD V3.3 *** A0A022PY01_ERYGU)
Sequence	MDLEAGSSHLNSSPQHHFSDLFHIPNTKNVSFHALKRWREAALVLNASRRFRYTLDLRKA QEKEQRRRMIRAHAQVIRAALLFKLAGQRAIVLGTEVAPLPPRGDYGISLEQLASVTRDH NLSALQQYGGAKGLSEKLKTDVDSGIADDDIELSKRKNVFGANTYPMKKGRSYLRFLWEA WQDLTLIILIVAAVLSLALGIHTKGLKEGWYDGGSITFAVLLVIFVTATSDYRQSLRFQN LNEEKRNIQVEVIRDGRRDKISIYEIVVGDFVPLRIGDQVPADGVLISGHSLAIDESSMT GESKIVNKNQKAPFLMAGCKVADGAGTMLVTGVGINTEWGLLMASISEDTGEETPLQVRL NGVATFIGIVGLAVALFVLIVLLSRFFTGHSKNPDGTTQFVHGQTSVGKTMDGVVHIITA AVTIVVVAVPEGLPLAVTLTLACSMKKMMADKALVRRLSACETMGSATTICSDKTGTLTL NQMTVVEAYVGKKKLDSPEDGSQLHSAVSSLLDEGITQNTSGSVFTSKDGKGTEVSGSPT EKAILSWGVKIGMKFDVVRSQSIVLHVSPFNSTKKRGGVVVREQSGSQVHMHWKGAAEII LASCTGYLDSNGCLQSIEKEKDFLKEAIEDMAAKSLRCVAIAYQTCNVNEVPTDEEQLAQ WILPEDDLILLAILGIKDPCRPGVKDAVRQCSDSGVKVRMVTGDNIQTARAIALECGILS SNTEVTEFEVIEGKTFRELSEKEREQVANRMSVMGRSSPSDKLLLVQTLRKLGEVVAVTG DGTNDAPALHEADIGLSMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFI QFQLTVNVAALVINVVAAVSSGDVPLNTVQLLWVNLIMDTLGALALATEPPTDHLMHRPP VGRREPLVTNIMWRNLLIQALYQIGILLLLNFQGKSILSLENDDPKHANMVKNTLIFNAF VFCQIFNEVNARKPDEMNVFTGVTKNPLFTGVVGTTFILQIIIIELLGKFTSTVGLSWKL WMVSLVIGIISWPLAAAGKLIPVPKTPVAKVFIKLYQRCIA*

Transcript Sequence

Transcript ID	Solyc03g123890.3.1
Transcript Infomation	Calcium-transporting ATPase (AHRD V3.3 *** A0A022PY01_ERYGU)
Sequence	GTATTAATTTTGATAGGAGAATGTTGGTGTGAGCATCACATGAAGTGATGGTGGTAAAGC AAAAAACCCATCCTTTGCGCGAAAACCCTGAAATAGAAAACGGTTTTTGGGCAAAACCCC AAATCAAGGTTTGTGGTTTCCCTGTATAGTCGCTCGACCTCATATTACATGATTTTTGGC TCTTCCTCCTCTCACTACAAATACAAAGGATGTATGTATCTCTCTCTCTCATTTACTATA TATATCTGAGAGTGGTGGCATCTGACGACTGCTCCAACCATGGACCTGGAAGCCGGCTCC TCCCATCTCAACTCTTCTCCCCAACACCACTTCTCTGATCTTTTCCACATTCCCAATACC AAGAATGTATCTTTCCACGCTCTTAAACGCTGGAGGGAAGCTGCACTTGTGCTTAATGCT TCACGCCGATTTAGGTATACTCTCGACTTGAGAAAAGCCCAAGAGAAAGAACAAAGAAGA AGGATGATCAGAGCACATGCTCAAGTCATAAGAGCCGCACTACTTTTTAAACTTGCTGGA CAACGAGCTATTGTGTTGGGTACCGAAGTTGCTCCTCTACCTCCTCGTGGTGACTATGGA ATTTCACTTGAACAGCTAGCTTCAGTGACTAGGGATCACAATCTTTCTGCACTGCAACAA TACGGAGGAGCCAAAGGCTTATCAGAGAAGTTGAAAACAGATGTTGATTCAGGAATTGCT GATGATGATATTGAATTGTCAAAAAGAAAAAATGTATTTGGGGCAAATACGTATCCCATG AAAAAGGGTCGCAGTTACTTGAGATTCCTTTGGGAGGCTTGGCAAGATCTGACTCTCATC ATCTTAATTGTAGCTGCTGTACTATCACTGGCACTTGGAATACACACAAAGGGCCTGAAA GAAGGATGGTATGATGGTGGAAGCATAACTTTTGCCGTACTTCTTGTTATTTTTGTAACA GCAACAAGTGACTACAGACAGTCCTTGCGATTTCAGAACTTAAATGAAGAAAAACGAAAT ATCCAAGTAGAGGTTATAAGAGACGGCAGAAGGGATAAAATTTCAATATACGAAATTGTT GTTGGTGATTTTGTTCCTCTCAGGATAGGCGATCAGGTTCCTGCAGATGGAGTCTTGATC TCTGGTCATTCTCTGGCAATTGATGAGTCTAGCATGACTGGTGAAAGCAAGATTGTAAAC AAAAATCAAAAGGCACCTTTCTTGATGGCTGGTTGCAAGGTAGCAGATGGTGCTGGAACC ATGCTTGTAACTGGTGTAGGAATCAATACTGAATGGGGATTGTTGATGGCGAGTATATCA GAGGATACTGGTGAAGAAACTCCTTTGCAGGTGCGTTTGAATGGGGTTGCCACCTTTATC GGCATTGTTGGCCTTGCTGTTGCTCTCTTTGTGCTCATTGTTCTTTTGAGCAGGTTCTTC ACTGGGCATAGCAAAAATCCAGATGGGACTACCCAGTTTGTTCATGGACAGACCAGTGTT GGTAAAACAATGGATGGAGTTGTACATATCATCACTGCAGCTGTCACAATTGTGGTTGTT GCTGTCCCTGAAGGTCTTCCTTTAGCTGTTACATTGACTTTAGCATGCTCAATGAAGAAA ATGATGGCTGACAAGGCTTTGGTGCGCAGACTTTCAGCTTGTGAAACTATGGGCTCTGCT ACAACTATTTGTAGTGATAAAACTGGAACACTGACTCTGAATCAGATGACAGTCGTAGAA GCCTATGTCGGGAAAAAGAAGCTCGACTCACCTGAAGATGGTTCACAGTTGCATTCAGCT GTTTCTTCTCTTCTGGATGAGGGCATAACTCAGAATACATCTGGCAGTGTCTTTACTTCT AAGGATGGCAAGGGAACAGAGGTTTCAGGCTCTCCCACTGAAAAAGCCATTCTTTCATGG GGCGTCAAGATTGGAATGAAGTTCGATGTTGTCAGATCACAATCCATAGTTCTTCATGTC TCTCCTTTTAATTCTACAAAGAAGAGAGGAGGTGTTGTAGTTAGAGAGCAGAGTGGCTCT CAAGTTCATATGCATTGGAAAGGTGCAGCTGAAATTATACTGGCATCTTGTACTGGATAC CTTGATTCAAATGGCTGCTTGCAATCCATTGAAAAGGAGAAGGATTTTTTGAAAGAAGCC ATTGAAGATATGGCAGCAAAAAGTTTGAGGTGTGTTGCCATTGCATACCAAACTTGTAAT GTGAATGAGGTTCCAACTGATGAAGAACAACTGGCTCAATGGATTCTACCAGAAGATGAC CTTATTTTGCTTGCTATACTCGGTATAAAGGATCCTTGTCGTCCAGGTGTCAAAGATGCA GTGAGACAGTGCAGTGATTCTGGTGTTAAGGTGCGGATGGTAACTGGAGATAATATTCAA ACAGCTAGAGCAATTGCCTTGGAGTGTGGAATTTTAAGTTCAAATACTGAAGTCACAGAA TTTGAAGTTATTGAGGGGAAAACCTTCCGTGAGTTGTCTGAGAAGGAGAGAGAACAAGTT GCAAACAGAATGTCGGTTATGGGAAGGTCATCACCAAGTGACAAGCTTTTGCTTGTGCAA ACTCTGCGTAAACTAGGGGAAGTCGTTGCTGTTACTGGAGATGGAACTAATGATGCTCCT GCACTGCATGAGGCCGACATAGGCCTTTCCATGGGCATCCAAGGAACAGAAGTCGCAAAA GAAAGCTCTGACATCATTATCTTGGATGATAATTTTGCTTCAGTAGTGAAGGTTGTACGC TGGGGTCGTTCTGTTTATGCAAATATTCAGAAATTCATTCAGTTCCAGCTCACTGTTAAT GTCGCAGCTCTTGTAATCAATGTTGTGGCAGCAGTTTCTTCTGGTGATGTTCCTCTAAAC ACAGTGCAGCTTCTTTGGGTCAATCTCATTATGGATACTCTGGGAGCACTAGCTTTGGCT ACTGAACCACCAACTGACCATCTTATGCATAGACCTCCTGTTGGTCGAAGGGAACCTCTG GTGACAAATATCATGTGGAGGAACTTGCTTATTCAGGCTCTCTACCAAATCGGAATCCTT CTTCTACTCAATTTCCAGGGCAAGAGCATTCTCAGCTTAGAGAATGATGACCCAAAACAT GCTAATATGGTGAAGAATACCTTAATTTTCAATGCATTTGTTTTCTGCCAAATATTCAAT GAGGTTAATGCTCGAAAGCCAGATGAAATGAATGTCTTTACTGGCGTGACCAAAAATCCC CTCTTTACTGGGGTTGTGGGAACTACTTTTATACTTCAGATCATTATCATTGAGTTACTT GGAAAATTTACGTCGACGGTTGGACTGAGTTGGAAATTATGGATGGTTTCACTTGTCATT GGTATTATCAGTTGGCCTCTTGCTGCTGCGGGAAAATTGATCCCAGTTCCAAAGACCCCT GTGGCTAAGGTCTTCATCAAGTTATATCAGCGATGCATTGCATAATTCAGCTGCACTACT TGGTTGTATATAATATGTATAGTACGAGAATAGTTCTGAATTGGAAGGAAAAAAAATGTA TAGACTAGTGCCCATTAGCTAGATTTGATAAATGCTGATTATTTATTAGGAAGAGAAGCC CCAAAAAAGATTAGAAAGCATGTTGCATGATGTATAAAGTAATTTGTATATGTTATTGAC AGGTGTACGTAGTACATGACAAATATCTATATATTCTTTTACCGAACAAGAGTTAGTAAT TTTATTTGTGGGAAAAGTTGATTGGAGGAGTAAACATGTAACTGACCTGCTGTTATTATA TGTGGGAGTAGGAGCGTTGGTCGCAGATATGTTGCTATTACGACGGCATCAGCAATGTAG AATAGAAAAGTAAAAGTAATAGTACCTGATATTCATGAGCATTAATTAGTGAGGGAGAAG GTAAGATATCCATCCTTGTGATTTACCAACAGGAGGAGGTTAGGTAAAAACGTGATTCCT TTTGATCATGTATATATACTCTCAATCATAATACTACTCCACTCCACTTCACAACAA