Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g123750.3.1
CDS Infomation

Lipase (AHRD V3.3 *** Q5S8F1_RICCO)
Sequence

ATGGAAGTGGATGGAGGTGAATGGACTGGGAATTCGCGGTTTTTGATTGTGAATTACCAA
GATGGAGGAATTTTGGACCTCATGCGCTTTCTCCTATCAGCTAACAAGGAAAACGCTCAT
AAATTTCTCCACTATTCCGACGGCGGTACCCCTGTGGTGGCGGAAGAGTTGACACGTGTT
CATGACGATACCACTGCCGGAGATCATCGATGGGTTATATTTGTCTCCGTTATTGTGCGC
AAATTAATCGCCATTTTCGGTAAACCCATGGAATGGTTTGGGTATCTCCTCGACTTCATC
CTCAACCTTCTCTCTCTCAATGGCAACTTTTTTGGCCTTTTCTACAATATATTGCATGGA
AAGGTGGTGATGCCACAGAGAGGGTCAGAAACGTTTATAAGTGCGATTGGGCATTTAGAT
GGGCGTATAGACTTATACAGGACTGAGACGTTAACCAAGGAAATTGGAGAGCCTGATTTC
TGGCAGAAAGATATTCAACTTGGAATAGGACACAGAGCCCTTATGGACCTCTGTATGATG
GCTTCAAAGTTGGCCTACGAGAATGCAAAGGTCGTTCAGAATGTCGTAAATATTCACTGG
AAGATGCATTTTGTGGATTTCTACAATTGTTGGAATGATTTCGAGAAAGAGATGTCCACC
CAGGTTTTTATATTGTGTGATAAGCCAAAAGATGCAAACTTGATAGTCATCAGCTTCAGG
GGCACAGAGCCTTTTGATGCTGATGACTGGATCACTGATTTTGACTACTCTTGGTACGAG
ATTCCAAAACTTGGCAAAGTACACATGGGTTTCTTGGAAGCCTTAGGTTTAGGGAGCAGA
GCTAAAGTCTCCACATTTCATGAACAGCTGTTCATGAATAATCAGAACTTCACCAAATTA
GAGAATGATGCAACTATTGCTCCTTCAGAAAGTTCTGAATCTTCTACCATGTTCAGTGAT
TCTGATGCACACAGTGTGTCAGACCAGTCGCCTGAATCAGATAGGCCTACTGATGCCGGA
TCAAAGAAGTTCAAACTAGATATGCCAGAGAGGACGGCATACTATGTTGTCAGGAGTAAA
CTCAAAAGGTTACTCAATGAGCACAAGAATGCAAAGTTTGTTGTTACAGGCCATAGCCTT
GGTGGAGCATTAGCTATATTATTCCCGACAATCCTAGTGCTGCATGAGGAGATGAATGTC
ATGGAACGGTTATTGGGGATATATACATATGGGCAGCCAAGGATTGGGAACAGACAGTTA
GGGAGGTTCATGGAAGCCCATTTGGAACATCCAGTCCCAAAGTACTTCAGAGTTGTTTAT
TCCAATGATCTTGTGCCAAGATTACCTTATGATAATAAAACATTCCTGTTTAAACACTTT
GGGATTTGCCAGTATTACAACAGCTTATATGTTGAGCAGAACGTCGATGAAGAGCCAAAC
AGAAACTATTTTGGGCTGCGATTTCTGATACCATTGTATCTGAATGCTGGGTGGGAGCTC
ATCAGAAGCTTTACAATGGGTCACATATATGGAGCCGAGTATGAGGAATGCTGGGAATCA
GTTGTGCTTCGCGTGCTAGGACTTTTCCTTCCTGGTATTTCTGCCCACAGCCCAGTTGAT
TACGTGAACTCCGTCAGACTTGGAAAGGAGAGAAGTACCCAAATGTCGTCTTTTTAG

Peptide Sequence

PEP ID

Solyc03g123750.3.1
PEP Infomation

Lipase (AHRD V3.3 *** Q5S8F1_RICCO)
Sequence

MEVDGGEWTGNSRFLIVNYQDGGILDLMRFLLSANKENAHKFLHYSDGGTPVVAEELTRV
HDDTTAGDHRWVIFVSVIVRKLIAIFGKPMEWFGYLLDFILNLLSLNGNFFGLFYNILHG
KVVMPQRGSETFISAIGHLDGRIDLYRTETLTKEIGEPDFWQKDIQLGIGHRALMDLCMM
ASKLAYENAKVVQNVVNIHWKMHFVDFYNCWNDFEKEMSTQVFILCDKPKDANLIVISFR
GTEPFDADDWITDFDYSWYEIPKLGKVHMGFLEALGLGSRAKVSTFHEQLFMNNQNFTKL
ENDATIAPSESSESSTMFSDSDAHSVSDQSPESDRPTDAGSKKFKLDMPERTAYYVVRSK
LKRLLNEHKNAKFVVTGHSLGGALAILFPTILVLHEEMNVMERLLGIYTYGQPRIGNRQL
GRFMEAHLEHPVPKYFRVVYSNDLVPRLPYDNKTFLFKHFGICQYYNSLYVEQNVDEEPN
RNYFGLRFLIPLYLNAGWELIRSFTMGHIYGAEYEECWESVVLRVLGLFLPGISAHSPVD
YVNSVRLGKERSTQMSSF*

Transcript Sequence

Transcript ID

Solyc03g123750.3.1
Transcript Infomation

Lipase (AHRD V3.3 *** Q5S8F1_RICCO)
Sequence

GCACAATCGTGACGCAAAATACCCGGCCTTTTTTTTTTCCATTAAGTTAATAGAGCGAAT
CTATGATGACTTAGTTGCTTGCAAAAATGGAAGTGGATGGAGGTGAATGGACTGGGAATT
CGCGGTTTTTGATTGTGAATTACCAAGATGGAGGAATTTTGGACCTCATGCGCTTTCTCC
TATCAGCTAACAAGGAAAACGCTCATAAATTTCTCCACTATTCCGACGGCGGTACCCCTG
TGGTGGCGGAAGAGTTGACACGTGTTCATGACGATACCACTGCCGGAGATCATCGATGGG
TTATATTTGTCTCCGTTATTGTGCGCAAATTAATCGCCATTTTCGGTAAACCCATGGAAT
GGTTTGGGTATCTCCTCGACTTCATCCTCAACCTTCTCTCTCTCAATGGCAACTTTTTTG
GCCTTTTCTACAATATATTGCATGGAAAGGTGGTGATGCCACAGAGAGGGTCAGAAACGT
TTATAAGTGCGATTGGGCATTTAGATGGGCGTATAGACTTATACAGGACTGAGACGTTAA
CCAAGGAAATTGGAGAGCCTGATTTCTGGCAGAAAGATATTCAACTTGGAATAGGACACA
GAGCCCTTATGGACCTCTGTATGATGGCTTCAAAGTTGGCCTACGAGAATGCAAAGGTCG
TTCAGAATGTCGTAAATATTCACTGGAAGATGCATTTTGTGGATTTCTACAATTGTTGGA
ATGATTTCGAGAAAGAGATGTCCACCCAGGTTTTTATATTGTGTGATAAGCCAAAAGATG
CAAACTTGATAGTCATCAGCTTCAGGGGCACAGAGCCTTTTGATGCTGATGACTGGATCA
CTGATTTTGACTACTCTTGGTACGAGATTCCAAAACTTGGCAAAGTACACATGGGTTTCT
TGGAAGCCTTAGGTTTAGGGAGCAGAGCTAAAGTCTCCACATTTCATGAACAGCTGTTCA
TGAATAATCAGAACTTCACCAAATTAGAGAATGATGCAACTATTGCTCCTTCAGAAAGTT
CTGAATCTTCTACCATGTTCAGTGATTCTGATGCACACAGTGTGTCAGACCAGTCGCCTG
AATCAGATAGGCCTACTGATGCCGGATCAAAGAAGTTCAAACTAGATATGCCAGAGAGGA
CGGCATACTATGTTGTCAGGAGTAAACTCAAAAGGTTACTCAATGAGCACAAGAATGCAA
AGTTTGTTGTTACAGGCCATAGCCTTGGTGGAGCATTAGCTATATTATTCCCGACAATCC
TAGTGCTGCATGAGGAGATGAATGTCATGGAACGGTTATTGGGGATATATACATATGGGC
AGCCAAGGATTGGGAACAGACAGTTAGGGAGGTTCATGGAAGCCCATTTGGAACATCCAG
TCCCAAAGTACTTCAGAGTTGTTTATTCCAATGATCTTGTGCCAAGATTACCTTATGATA
ATAAAACATTCCTGTTTAAACACTTTGGGATTTGCCAGTATTACAACAGCTTATATGTTG
AGCAGAACGTCGATGAAGAGCCAAACAGAAACTATTTTGGGCTGCGATTTCTGATACCAT
TGTATCTGAATGCTGGGTGGGAGCTCATCAGAAGCTTTACAATGGGTCACATATATGGAG
CCGAGTATGAGGAATGCTGGGAATCAGTTGTGCTTCGCGTGCTAGGACTTTTCCTTCCTG
GTATTTCTGCCCACAGCCCAGTTGATTACGTGAACTCCGTCAGACTTGGAAAGGAGAGAA
GTACCCAAATGTCGTCTTTTTAGAAATACTTTTGTCACAAAATAGCGGGGTTTACAGCTA
CAGAAGATCATGCAGAAGGCGTCCAGTTTAGTTTTTGAAGGTTGTTTGGAGTTTATTTAT
CTAAAGTAAACTTAAATCAGCTTTTTGTTTATGAGTTCAGTGAACTATATGTTCAAATAA
GACTTCCCTTTGTAGAATATGTGTTTTTTTTGTTGTTGAG