Gene sequences

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SNP Detection
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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc03g122110.1.1
CDS Infomation	LOW QUALITY:Pre-mRNA-splicing factor CWC22 (AHRD V3.3 *** A0A0B0NK35_GOSAR)
Sequence	ATGGAAGAAAGCCTAGAGTACCAAAAGAAGAGTTGGATTGCTTTAAAAAAGAGCATAAAT GGGCTGCTCAATAAAATCAATAAAGCGAACATAAAACACATCATTCCTGAATTGTTTGAA GAAAATTTGATTCGTGGTAGGGGCTTGTTTTGCAGATCAATTATGAAATCACAATTGAAT TCTGTTATTTTCACAGATGTTTTTGCAGCATTGATAGCCGTTGTTAACACAAAATTCCCA CAAATTGGTGAACTTTTGTGTAAGAGGATCATTCTGCAATTGCGGAGAGCTTATAACAAT AATAATAAACCTCAGATGTTAGCATCGGTTAAATTTATTGGTCATCTTGTCAATCAGCAA GTTGTTCATGAACTTGTAGCTTTGGAATTAGTTACTCTTTTACTTGAGAAACCTACTGAT GATAGTGTTGATGTTGCTGTTGGTTTCGTTAAGGAATGTGGTTCGATGCTTCAGGATCTG TGTCCCTTAGGGTTGCACGCTATTTTTGAGAGATTCAGAGGAATACTTCATGAAGGAGAA ATAGATAAAAGGGTTCAGTTCTTAATTGAAGAACTTTTTGCATTGCGGAAACAGAAGTTT CAGCCAGCTGTTCCTCCAGAACTTGACCTTGTTGAGGAGGAAGATCGATTAACACATGAA ATCTCTCTCGGAGACATGGTGGACGAGCAAATTGAATTGGATGTTTTCAAGCCCGATCCT AATTTTGTTGAAAATGAAAATAAGTATGAACAACTACAGAATAGGATTCTAGGTGGGAGT GATGAGGACGAAGAATCTGATCTTCTAGTTGGTGGTGATCAGGACGAGGATGAATCTGAG GACGAGGACGAGCACGAAATGAAAATTGAAGATGAGACAGAGACAAACTTGATCAATCTT CGGAGGACGATTTACTTAACGATTATGTCAAGTGGTGGGTTTGAAGGAGCAGGGCATAAG CTGTTGAAAATCAGACTAGAGCCTGGTCAGGAGATGGAACTATGCATAATGTTATTGGAG TGCTGCAGTCAGGAGAAGACTTTTCTCCATTACTATGCACTTTTGGCGCAGCGGTTATGC ATGATCAACAAAGTTCACCAGAAGAATTTTGAGAAATTATTCATGCAACAATACTCGATG ATCCACCAACTTGAAACTAATAAACTGCGTAATGTGGCAAAGTTTTTTGCTCAATTACTA GGCACTGATGCACTGCCTTGGCATGTTTTGGCTTATTTAAGATTGACAGAAGAGGATACT ACATCTTCTTCTCGTATATTCATCAAAATTTTATTCCAGGAGTTGTCAGGGCACCTTGGC ATCCATAAGCTGAATGAGCGTCTTAGTGACCCCTCTATGCAAGAGTCGTTTGAGTCGATA TTTCCAAAGGATAATCCTAAAAATGTGAGGTTTGCTATCAACTTTTTCACATCCATTGGT CTAGGTGGGATAACTGAAAATCTGCGAGACTATCTGAAGAACATGCCAAGGCTCATCTTG CAGCAAGAGAAACGTGTTTCCAGAGATGATGATCGTCCAAGGAAGAGGAGGAGGAGAAGT TAG

Peptide Sequence

PEP ID	Solyc03g122110.1.1
PEP Infomation	LOW QUALITY:Pre-mRNA-splicing factor CWC22 (AHRD V3.3 *** A0A0B0NK35_GOSAR)
Sequence	MEESLEYQKKSWIALKKSINGLLNKINKANIKHIIPELFEENLIRGRGLFCRSIMKSQLN SVIFTDVFAALIAVVNTKFPQIGELLCKRIILQLRRAYNNNNKPQMLASVKFIGHLVNQQ VVHELVALELVTLLLEKPTDDSVDVAVGFVKECGSMLQDLCPLGLHAIFERFRGILHEGE IDKRVQFLIEELFALRKQKFQPAVPPELDLVEEEDRLTHEISLGDMVDEQIELDVFKPDP NFVENENKYEQLQNRILGGSDEDEESDLLVGGDQDEDESEDEDEHEMKIEDETETNLINL RRTIYLTIMSSGGFEGAGHKLLKIRLEPGQEMELCIMLLECCSQEKTFLHYYALLAQRLC MINKVHQKNFEKLFMQQYSMIHQLETNKLRNVAKFFAQLLGTDALPWHVLAYLRLTEEDT TSSSRIFIKILFQELSGHLGIHKLNERLSDPSMQESFESIFPKDNPKNVRFAINFFTSIG LGGITENLRDYLKNMPRLILQQEKRVSRDDDRPRKRRRRS*

Transcript Sequence

Transcript ID	Solyc03g122110.1.1
Transcript Infomation	LOW QUALITY:Pre-mRNA-splicing factor CWC22 (AHRD V3.3 *** A0A0B0NK35_GOSAR)
Sequence	ATGGAAGAAAGCCTAGAGTACCAAAAGAAGAGTTGGATTGCTTTAAAAAAGAGCATAAAT GGGCTGCTCAATAAAATCAATAAAGCGAACATAAAACACATCATTCCTGAATTGTTTGAA GAAAATTTGATTCGTGGTAGGGGCTTGTTTTGCAGATCAATTATGAAATCACAATTGAAT TCTGTTATTTTCACAGATGTTTTTGCAGCATTGATAGCCGTTGTTAACACAAAATTCCCA CAAATTGGTGAACTTTTGTGTAAGAGGATCATTCTGCAATTGCGGAGAGCTTATAACAAT AATAATAAACCTCAGATGTTAGCATCGGTTAAATTTATTGGTCATCTTGTCAATCAGCAA GTTGTTCATGAACTTGTAGCTTTGGAATTAGTTACTCTTTTACTTGAGAAACCTACTGAT GATAGTGTTGATGTTGCTGTTGGTTTCGTTAAGGAATGTGGTTCGATGCTTCAGGATCTG TGTCCCTTAGGGTTGCACGCTATTTTTGAGAGATTCAGAGGAATACTTCATGAAGGAGAA ATAGATAAAAGGGTTCAGTTCTTAATTGAAGAACTTTTTGCATTGCGGAAACAGAAGTTT CAGCCAGCTGTTCCTCCAGAACTTGACCTTGTTGAGGAGGAAGATCGATTAACACATGAA ATCTCTCTCGGAGACATGGTGGACGAGCAAATTGAATTGGATGTTTTCAAGCCCGATCCT AATTTTGTTGAAAATGAAAATAAGTATGAACAACTACAGAATAGGATTCTAGGTGGGAGT GATGAGGACGAAGAATCTGATCTTCTAGTTGGTGGTGATCAGGACGAGGATGAATCTGAG GACGAGGACGAGCACGAAATGAAAATTGAAGATGAGACAGAGACAAACTTGATCAATCTT CGGAGGACGATTTACTTAACGATTATGTCAAGTGGTGGGTTTGAAGGAGCAGGGCATAAG CTGTTGAAAATCAGACTAGAGCCTGGTCAGGAGATGGAACTATGCATAATGTTATTGGAG TGCTGCAGTCAGGAGAAGACTTTTCTCCATTACTATGCACTTTTGGCGCAGCGGTTATGC ATGATCAACAAAGTTCACCAGAAGAATTTTGAGAAATTATTCATGCAACAATACTCGATG ATCCACCAACTTGAAACTAATAAACTGCGTAATGTGGCAAAGTTTTTTGCTCAATTACTA GGCACTGATGCACTGCCTTGGCATGTTTTGGCTTATTTAAGATTGACAGAAGAGGATACT ACATCTTCTTCTCGTATATTCATCAAAATTTTATTCCAGGAGTTGTCAGGGCACCTTGGC ATCCATAAGCTGAATGAGCGTCTTAGTGACCCCTCTATGCAAGAGTCGTTTGAGTCGATA TTTCCAAAGGATAATCCTAAAAATGTGAGGTTTGCTATCAACTTTTTCACATCCATTGGT CTAGGTGGGATAACTGAAAATCTGCGAGACTATCTGAAGAACATGCCAAGGCTCATCTTG CAGCAAGAGAAACGTGTTTCCAGAGATGATGATCGTCCAAGGAAGAGGAGGAGGAGAAGT TAG