Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g122090.3.1
CDS Infomation

25. vesicle transport protein (AHRD V3.3 *** A0A1D1XNZ8_9ARAE)
Sequence

ATGGTGAAGTTGACTTTGATTGCTCGCGTGACTGATGGCCTTCCTTTAGCCGAGGGGCTG
GATGATGGTCGTGATGTTCAAAATGCAGATTTCTACAAACAGCAGGTCAAGGCCTTATTC
AAGAACCTGTCGATGCGCCAAAATGACGCTTCAAGGATGTCTATTGAAACTGGACCTTAC
GTCTTCCATTATATCATTGAAGGGCATGTTTGTTATCTGACAATGTGTGATCGCTCTTAT
CCCAAGAAACTTGCCTTTCAATACCTGGAAGACCTTAAGAATGAGTTTGAGCGCGCCAAT
GGGAGTCAAATTGAAACTGCTGCTAGACCATATGCTTTTATTAAATTTGATACATTCATA
CAGAAGACGAAGAAACTGTACCAGGATACTAGAACTCAACGCAACATTTCTAAGTTGAAT
GATGAGCTTTACGAAGTTCATCAAATAATGACTCGAAATGTTCAAGAAGTTCTTGGAGTT
GGTGAAAAGTTGGACCAGGTCAGTCAAATGTCCAGCCGTTTGACATCTGAATCCCGGATA
TATGCTGATAAAGCAAAAGACTTAAATCGTCAGGCTTTGATTCGAAAATGGGCTCCTGTT
GCTATTGTGCTTGGAGTTGTCATTCTCTTCTTCTGGCTCAGAACAAAGATCTGGTGA

Peptide Sequence

PEP ID

Solyc03g122090.3.1
PEP Infomation

25. vesicle transport protein (AHRD V3.3 *** A0A1D1XNZ8_9ARAE)
Sequence

MVKLTLIARVTDGLPLAEGLDDGRDVQNADFYKQQVKALFKNLSMRQNDASRMSIETGPY
VFHYIIEGHVCYLTMCDRSYPKKLAFQYLEDLKNEFERANGSQIETAARPYAFIKFDTFI
QKTKKLYQDTRTQRNISKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSQMSSRLTSESRI
YADKAKDLNRQALIRKWAPVAIVLGVVILFFWLRTKIW*

Transcript Sequence

Transcript ID

Solyc03g122090.3.1
Transcript Infomation

25. vesicle transport protein (AHRD V3.3 *** A0A1D1XNZ8_9ARAE)
Sequence

CCTCTTCAAATCTCAGCAAACTCAGCAAAACCCCTCTTTGTTCCTATCCCATTTATTCCC
AGCTCCGATTCAAACTCTTAACTTATCAAAGGCGGTCAGCGATCGGCGACTGGATTCCGA
GCAGTCACGCAAGCGTATGATCGATCGCTGTATGCTTGCGGGAAAATATGGTGAAGTTGA
CTTTGATTGCTCGCGTGACTGATGGCCTTCCTTTAGCCGAGGGGCTGGATGATGGTCGTG
ATGTTCAAAATGCAGATTTCTACAAACAGCAGGTCAAGGCCTTATTCAAGAACCTGTCGA
TGCGCCAAAATGACGCTTCAAGGATGTCTATTGAAACTGGACCTTACGTCTTCCATTATA
TCATTGAAGGGCATGTTTGTTATCTGACAATGTGTGATCGCTCTTATCCCAAGAAACTTG
CCTTTCAATACCTGGAAGACCTTAAGAATGAGTTTGAGCGCGCCAATGGGAGTCAAATTG
AAACTGCTGCTAGACCATATGCTTTTATTAAATTTGATACATTCATACAGAAGACGAAGA
AACTGTACCAGGATACTAGAACTCAACGCAACATTTCTAAGTTGAATGATGAGCTTTACG
AAGTTCATCAAATAATGACTCGAAATGTTCAAGAAGTTCTTGGAGTTGGTGAAAAGTTGG
ACCAGGTCAGTCAAATGTCCAGCCGTTTGACATCTGAATCCCGGATATATGCTGATAAAG
CAAAAGACTTAAATCGTCAGGCTTTGATTCGAAAATGGGCTCCTGTTGCTATTGTGCTTG
GAGTTGTCATTCTCTTCTTCTGGCTCAGAACAAAGATCTGGTGATGCTTCCATACAGATG
CAGCTCAGTGACGACAATACTGTCAAATGTTTTATTCATATTTGTCACCATCAGACTCTG
CACAACCCAGAGAACCACCTCACATTACAGTTATCCAGCATGTGTTGTGCCATATCAGTT
TTATAGTGTAAAAGAGGAAAGGAACCGCGATGAATTATGTCCCTTAACCTTGAGAAATTA
CATTAATTTTGGCTCTCTTTTATATATTGTCTTGTTAGTTTAGCTTCAAAACTCCAACAA
GTAGCTCATTGTAGTTTCAGCTATGAAACTAACTTATTTCAGAATATACAGCAAATATAA
ACAATCCTTCAGACTGTTATGCACGGGAGTTTGGTGCTTTGTTTACCAACTCTAAGTTGC
TGTATGCCTT