Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g122080.3.1
CDS Infomation

DUF936 family protein (AHRD V3.3 *** A0A072THZ7_MEDTR)
Sequence

ATGGCAGCCCTTGTACCAGGAGTACTGATTAAGCTTCTCCAGAATATGCATTCCAATAAA
AAGGTTCGTGGAGAACATAGATCAGTCCTTTTACAAGTCATCAGCATTGTTCCTGCTTTG
AATGGATCAGAACTATGGCCGAACCATGGTTTCTTTATTAAAGTTTCGGATTCTTCCCAT
TCGACATATGTCACGTTATCCAAAGAGGAGAATGAGTTCATATTGAACAACAAATTGCAA
CTTGGCCAGTTCTTTTATGTTGAAAGAATGGAGCCTGGAACTCCAGTTCCAGTTTTAGTA
GGGGTGAGGCGACTTCCAGGGCGACATCCATTTGTAGGTAACCCGAAGGATTTAATGCAA
ATGTTGGAACCATCTGAAGTCACTGTTCGAAATGCTCAGGAAGATGTAAATGGTTCGAAG
TTGAATGAATCGCCTGAATTGAACAAAGAGGACAGTAAGAACAAATTTGTTATCAAAGAG
CAAAAGACGGTTGTTGCTTCCAGGTACATGCGAGGAGTATTAACCTCTAACACAAAGATT
GGAGGGCTTGATCAAGGTACTGGTGTGAAAGGCATTGAGAATGAGAACCGTGGAGCTGCT
AAAAAGGCCGTACCTCTGAAAGAGAAACAATGTGAGCTTAAAGGTCAGACACGGTCTTCA
ACTCCTTTCCGCAGCCAGTCTGATGCATTTGTGATAAACTCAGGAATAAATAAGCATATG
AAAACTCCAAGATTTTCAACATTGAAACTCACAACAAGCAAACAAGAAAGCATCAGAGAA
AACAGTCAATCCTCAGAAGCATACATGCCTTGGTCCTCACTACCAACCAACCTTGCAAAG
CCTGGGAAGGGAATACTTAGGAGGGGATTGTTAGCTTCTTTAGTAGCAGCAGAAGCTCAA
GAAGAAGCGAAGGAAGCAGCAAAACTTCTTCATTGCCTCAGAATGTTTGCTGAACTGTGC
ACCTCAGCATCACCAGAATGTCCCCATATATCTCTCTCCAAGTTTTTCGCGCTCAACAAT
CTCATTGAACTACCCAGTACTGTTAAAACAAAAGAGCTAACCCCAGATGATTTTGCTACC
AAATTATCTGTTCATGAGAAGGTGAAAGAAGGGAAGATGACATGTTTCATGAATGGTAAA
GCTACAAGCAAGTCTTTGAAGCCTTCTGTGGAACTTTCTGGGTCTGAAAAGCTAGAGTGG
GCAAAAGGAGATGGTTCCAAAGACATCGTGGAACTAAGAGAGCTTCTGTTAAATGAAATA
CAGTATTGGTTTCTCAAATTCTTGGAGGGAGCACTTGAAGTTGGACTCTGGCAGAACAAG
CAGGAACAAAAAACGAAAGTAAGTGTACCACGCCAAACGGAGTCAAAAAATCAAATAGCC
TTCACACTATCACAACTTAAGCATGCAAATGAATGGTTGGACAAAGTAAGGAGTACCTTA
TGCTCAGACAAAAACAACGTGGCTGATAGAGTTGATAGATTGAAGCAAAAACTCTACACT
TGTTTACTGCTTTACATGGATTCAGCCGCTTCAGCTCTTGGAAAACCGGCCTCATAG

Peptide Sequence

PEP ID

Solyc03g122080.3.1
PEP Infomation

DUF936 family protein (AHRD V3.3 *** A0A072THZ7_MEDTR)
Sequence

MAALVPGVLIKLLQNMHSNKKVRGEHRSVLLQVISIVPALNGSELWPNHGFFIKVSDSSH
STYVTLSKEENEFILNNKLQLGQFFYVERMEPGTPVPVLVGVRRLPGRHPFVGNPKDLMQ
MLEPSEVTVRNAQEDVNGSKLNESPELNKEDSKNKFVIKEQKTVVASRYMRGVLTSNTKI
GGLDQGTGVKGIENENRGAAKKAVPLKEKQCELKGQTRSSTPFRSQSDAFVINSGINKHM
KTPRFSTLKLTTSKQESIRENSQSSEAYMPWSSLPTNLAKPGKGILRRGLLASLVAAEAQ
EEAKEAAKLLHCLRMFAELCTSASPECPHISLSKFFALNNLIELPSTVKTKELTPDDFAT
KLSVHEKVKEGKMTCFMNGKATSKSLKPSVELSGSEKLEWAKGDGSKDIVELRELLLNEI
QYWFLKFLEGALEVGLWQNKQEQKTKVSVPRQTESKNQIAFTLSQLKHANEWLDKVRSTL
CSDKNNVADRVDRLKQKLYTCLLLYMDSAASALGKPAS*

Transcript Sequence

Transcript ID

Solyc03g122080.3.1
Transcript Infomation

DUF936 family protein (AHRD V3.3 *** A0A072THZ7_MEDTR)
Sequence

CCACATCATTCAGGCGCCGGATTCCGAATGCCGGGTTCTTCTCCTTCTCCAGTCTTTGTA
TATATTTCCTGGTAATTTTTTCCTCTTTCTCACTGGCAAAAACACAAACAGGTGGTCCTA
TATCATTTTCCATAGGATCTTCTTGATGGTTTTCGGATTGTTTTAATTTAGTTAACTTGC
ATTATGTTATGTTTTTAGCGTAACTGGGAGCAAACAAAATGGCAGCCCTTGTACCAGGAG
TACTGATTAAGCTTCTCCAGAATATGCATTCCAATAAAAAGGTTCGTGGAGAACATAGAT
CAGTCCTTTTACAAGTCATCAGCATTGTTCCTGCTTTGAATGGATCAGAACTATGGCCGA
ACCATGGTTTCTTTATTAAAGTTTCGGATTCTTCCCATTCGACATATGTCACGTTATCCA
AAGAGGAGAATGAGTTCATATTGAACAACAAATTGCAACTTGGCCAGTTCTTTTATGTTG
AAAGAATGGAGCCTGGAACTCCAGTTCCAGTTTTAGTAGGGGTGAGGCGACTTCCAGGGC
GACATCCATTTGTAGGTAACCCGAAGGATTTAATGCAAATGTTGGAACCATCTGAAGTCA
CTGTTCGAAATGCTCAGGAAGATGTAAATGGTTCGAAGTTGAATGAATCGCCTGAATTGA
ACAAAGAGGACAGTAAGAACAAATTTGTTATCAAAGAGCAAAAGACGGTTGTTGCTTCCA
GGTACATGCGAGGAGTATTAACCTCTAACACAAAGATTGGAGGGCTTGATCAAGGTACTG
GTGTGAAAGGCATTGAGAATGAGAACCGTGGAGCTGCTAAAAAGGCCGTACCTCTGAAAG
AGAAACAATGTGAGCTTAAAGGTCAGACACGGTCTTCAACTCCTTTCCGCAGCCAGTCTG
ATGCATTTGTGATAAACTCAGGAATAAATAAGCATATGAAAACTCCAAGATTTTCAACAT
TGAAACTCACAACAAGCAAACAAGAAAGCATCAGAGAAAACAGTCAATCCTCAGAAGCAT
ACATGCCTTGGTCCTCACTACCAACCAACCTTGCAAAGCCTGGGAAGGGAATACTTAGGA
GGGGATTGTTAGCTTCTTTAGTAGCAGCAGAAGCTCAAGAAGAAGCGAAGGAAGCAGCAA
AACTTCTTCATTGCCTCAGAATGTTTGCTGAACTGTGCACCTCAGCATCACCAGAATGTC
CCCATATATCTCTCTCCAAGTTTTTCGCGCTCAACAATCTCATTGAACTACCCAGTACTG
TTAAAACAAAAGAGCTAACCCCAGATGATTTTGCTACCAAATTATCTGTTCATGAGAAGG
TGAAAGAAGGGAAGATGACATGTTTCATGAATGGTAAAGCTACAAGCAAGTCTTTGAAGC
CTTCTGTGGAACTTTCTGGGTCTGAAAAGCTAGAGTGGGCAAAAGGAGATGGTTCCAAAG
ACATCGTGGAACTAAGAGAGCTTCTGTTAAATGAAATACAGTATTGGTTTCTCAAATTCT
TGGAGGGAGCACTTGAAGTTGGACTCTGGCAGAACAAGCAGGAACAAAAAACGAAAGTAA
GTGTACCACGCCAAACGGAGTCAAAAAATCAAATAGCCTTCACACTATCACAACTTAAGC
ATGCAAATGAATGGTTGGACAAAGTAAGGAGTACCTTATGCTCAGACAAAAACAACGTGG
CTGATAGAGTTGATAGATTGAAGCAAAAACTCTACACTTGTTTACTGCTTTACATGGATT
CAGCCGCTTCAGCTCTTGGAAAACCGGCCTCATAGACAATAATTCATGGAAATGGACCAG
AGATCCTAAGATGCGTTCGTCATATTCTATTTATGTAAACATTATGCAAGAAGCTATTTA
AAGCCACCTTAAAAGTGGCCAATAAGCTGATATTTATGGTTCTGTATCTAATTATTTCAT
GTATTTTTTTAAAAAAAACGGTTGTTACAGTAAGTTAATGATGACTTACTTGCATTGCTG
TTAATATTTGAATGTAATTATTGGCGGGGGTTTAAGCTGGAGGGCGAGGGCACATGCAAA
ATTCTCAAGGATAGAAATCCGAGTAATCTAGCATGTGCCTGCTTCTCCGGCTTAAATAAC
CTGTCACCTGCAAATCATTAATTCTTGCAGGCACCTCAACTAGTCCACCTAGTACCTGCA
ACGCTCTTCAGTTAAATAAGTCACTGCACAAGGAATATGGATGATCAAACAAGGATAAGG
CCAAGCAGAAGGTTGTTTTTTGCTTTGGTGACTGTTGAAGTTTGGCAGCCAAAAAGGTTT
AAGAGAAGACCAAATATTACAAATACAAGCCACCCACCCCATTTTCCTATCAAATACTAT
TTCAAAACTTGAACTGAAGTATATGAAAAACAGCCACCAATTCCCAAGATTTTCTGCTAA
TTTGCTTATTAAGTTGAAAGAATGAAACTTTGCCTACAAAAATTGTGATGTTAGTTAACT
TGTTATATATGATCAAATTATTAGACACAA