Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g121950.3.1
CDS Infomation

Ataxin-2 related protein (AHRD V3.3 *** A2PZE4_IPONI)
Sequence

ATGCAGCAAGCTGTTCAGTCAAGGTCCTTTGCCAATGGATTTGGCAGTCGCAAAGGCGAA
AAAGAAATGGGGACAAGGTTGGAGAGTAAAATGCAGTCTACAAAAACGACTTCCAGCAAG
TCGACAGCTGTAGGTAAAGGGGGATCATACGAAAGTCCTTCACATGATCGACTAGTTTAT
TTTAGTACATGTCTTCTTGGACATCAAGTGGAAGTACAAACAACGGATGGATCTGTGTTT
TCAGGGATATTTCATGCAACAAATGCTGACAAAGATTTTGGTATTATTCTGAAACTGGCC
CACTTGATAAAAGATGGTTCCCTGGAGAGTAAGAATACTCCTGAATCTCTGGTCAAACCT
CCAAGTAAGACTTTGATTATACCGGGTAAAGAGCTTGTGCAAGTTTTAGCAAAGGGTGTT
CCTGCCTCTTTAGATGTCTTCAGAGCTGAATTGCTGCGGGAAAAACAGCTGGAACTGTTG
ACAGATTCCTGCATATCACAGTCCCGGCATGGTGAGGTAGAGCGGCAGTTGGAACGTTGG
GTGCCTGATGATGATGCTCTTGAATGTCCTGAGTTGGATAACATATTTGATGGCCACTGG
AACAGGGGCTGGGATCAATTTCAGGCCAATGAAACACTATTTGGAGTAAAAAGCACATTC
AATGAGGAACTTTATACTACAAAGCTTGACAAAGGTCCTCAAATGAGGGAGTTGGAAAAA
GAAGCTTTAAGAATAGCTAGGGAAATCGAGGGTGAGGAAACACGTGATCTTCATCTAGCA
GAGGAGAGAGGAATTCAACTTCATGGGAGCCTCGAAATTGATGAAGAAACCAGATTTTCA
GCAGTTGTTAGAGGGGTTGATGATAGTGGATATGGTGATTGTGAGGACATACTGTTGGAT
TCACGTAATGATGAAACATTTCAATGTATCTCTAGTTCTTCTATGGGAAAGTCATTCACT
GGTATGAGTGTTGGGGAAGTTGTTGATGGTGTGGAATTCTCATCAAGATCTTCCTCTTTG
GATGAATTGCAATCCTCTCAGTTGAGTACCAGCAGGGATGTCTATCAGACTTACTATGAT
GATCATAGCAAACAGTCATCAGCTAAACATGTTCCTCAAAGTGCCTCAAAGATGGATGAG
AGCAGGGGGCACAAGATCACTTTCAATGAACATGATGGAGCTAGTTGCAATGACGAGGAG
ACGAGAATGCAAATGTTAGCTGAAGGGGCGCATACATCGATACCCGAAGATTCAAAGTCA
TCACTAAGAGTGAAAATGGAAACCTTGGATAAGGGTGTGTCATCTATGAATGTCTCTGCA
TTGGCCCCCGTTCCTGAATTCCAGGAAAAGATCACAGGTTCTTTTAGTGAAAAGGGGGCT
GTTGGGTCTTCCAAGAGTCGAGACAACACCCGATCTGTTAATTCTTGTGTTAGACCTAGC
AGTTCTGCTTTATCTTCTATTGATAGAGCAGGTGCTGCATCTAGCAATGGATTATCACGT
AGCTCTTCCGTGAGTTCATTATCTTCAGAAAAATCCACGAAGTCCACATTAAATCCACAT
GCTAAGGAATTTAAATTTAATCCCAGTGCAAAGAGCTTTGTCCCATCTCAAGCGACTTTG
AGGCCGACATCTCCAGTGTCTGATAATTCCTTCTACTATCCAGCTGGGATGGCTGCTATG
CCACACATGCATGGCATGTCTATGGGCTTAGGGGTTGGTCCATCGTTTGCTGGACATCAG
TCTGTTGTATATAATCCACAGGGTACCCCTGTGCCACAGCCATATTTTCATCCAAATGGA
CCTCAGTATGGACAGCAGATGATGATTGGTCACCCTCGGCAAGTTGTCTACATGCCAACT
TATCCCCCTGAGTCACCGTACAAGGGAAGGGGAGAGTATTGA

Peptide Sequence

PEP ID

Solyc03g121950.3.1
PEP Infomation

Ataxin-2 related protein (AHRD V3.3 *** A2PZE4_IPONI)
Sequence

MQQAVQSRSFANGFGSRKGEKEMGTRLESKMQSTKTTSSKSTAVGKGGSYESPSHDRLVY
FSTCLLGHQVEVQTTDGSVFSGIFHATNADKDFGIILKLAHLIKDGSLESKNTPESLVKP
PSKTLIIPGKELVQVLAKGVPASLDVFRAELLREKQLELLTDSCISQSRHGEVERQLERW
VPDDDALECPELDNIFDGHWNRGWDQFQANETLFGVKSTFNEELYTTKLDKGPQMRELEK
EALRIAREIEGEETRDLHLAEERGIQLHGSLEIDEETRFSAVVRGVDDSGYGDCEDILLD
SRNDETFQCISSSSMGKSFTGMSVGEVVDGVEFSSRSSSLDELQSSQLSTSRDVYQTYYD
DHSKQSSAKHVPQSASKMDESRGHKITFNEHDGASCNDEETRMQMLAEGAHTSIPEDSKS
SLRVKMETLDKGVSSMNVSALAPVPEFQEKITGSFSEKGAVGSSKSRDNTRSVNSCVRPS
SSALSSIDRAGAASSNGLSRSSSVSSLSSEKSTKSTLNPHAKEFKFNPSAKSFVPSQATL
RPTSPVSDNSFYYPAGMAAMPHMHGMSMGLGVGPSFAGHQSVVYNPQGTPVPQPYFHPNG
PQYGQQMMIGHPRQVVYMPTYPPESPYKGRGEY*

Transcript Sequence

Transcript ID

Solyc03g121950.3.1
Transcript Infomation

Ataxin-2 related protein (AHRD V3.3 *** A2PZE4_IPONI)
Sequence

GTCTAAGTTGGGCTATCCGGTACCGGTAGACCCGCAAAAACTATTGTGTTCATCTTTCAA
TTTTTCTTCGACACAGAGCATCGTCGTCTCCGATCAATCCCCTTTCTTGATCGCCACCTT
CAATCTCTCTAGATATCTATATATATTTATCTATTCTGTGTAGGGTGAAGCTGAGCTGAA
CTGTATCTTGCTTATATCTTTCGGGGACAATATGCAGCAAGCTGTTCAGTCAAGGTCCTT
TGCCAATGGATTTGGCAGTCGCAAAGGCGAAAAAGAAATGGGGACAAGGTTGGAGAGTAA
AATGCAGTCTACAAAAACGACTTCCAGCAAGTCGACAGCTGTAGGTAAAGGGGGATCATA
CGAAAGTCCTTCACATGATCGACTAGTTTATTTTAGTACATGTCTTCTTGGACATCAAGT
GGAAGTACAAACAACGGATGGATCTGTGTTTTCAGGGATATTTCATGCAACAAATGCTGA
CAAAGATTTTGGTATTATTCTGAAACTGGCCCACTTGATAAAAGATGGTTCCCTGGAGAG
TAAGAATACTCCTGAATCTCTGGTCAAACCTCCAAGTAAGACTTTGATTATACCGGGTAA
AGAGCTTGTGCAAGTTTTAGCAAAGGGTGTTCCTGCCTCTTTAGATGTCTTCAGAGCTGA
ATTGCTGCGGGAAAAACAGCTGGAACTGTTGACAGATTCCTGCATATCACAGTCCCGGCA
TGGTGAGGTAGAGCGGCAGTTGGAACGTTGGGTGCCTGATGATGATGCTCTTGAATGTCC
TGAGTTGGATAACATATTTGATGGCCACTGGAACAGGGGCTGGGATCAATTTCAGGCCAA
TGAAACACTATTTGGAGTAAAAAGCACATTCAATGAGGAACTTTATACTACAAAGCTTGA
CAAAGGTCCTCAAATGAGGGAGTTGGAAAAAGAAGCTTTAAGAATAGCTAGGGAAATCGA
GGGTGAGGAAACACGTGATCTTCATCTAGCAGAGGAGAGAGGAATTCAACTTCATGGGAG
CCTCGAAATTGATGAAGAAACCAGATTTTCAGCAGTTGTTAGAGGGGTTGATGATAGTGG
ATATGGTGATTGTGAGGACATACTGTTGGATTCACGTAATGATGAAACATTTCAATGTAT
CTCTAGTTCTTCTATGGGAAAGTCATTCACTGGTATGAGTGTTGGGGAAGTTGTTGATGG
TGTGGAATTCTCATCAAGATCTTCCTCTTTGGATGAATTGCAATCCTCTCAGTTGAGTAC
CAGCAGGGATGTCTATCAGACTTACTATGATGATCATAGCAAACAGTCATCAGCTAAACA
TGTTCCTCAAAGTGCCTCAAAGATGGATGAGAGCAGGGGGCACAAGATCACTTTCAATGA
ACATGATGGAGCTAGTTGCAATGACGAGGAGACGAGAATGCAAATGTTAGCTGAAGGGGC
GCATACATCGATACCCGAAGATTCAAAGTCATCACTAAGAGTGAAAATGGAAACCTTGGA
TAAGGGTGTGTCATCTATGAATGTCTCTGCATTGGCCCCCGTTCCTGAATTCCAGGAAAA
GATCACAGGTTCTTTTAGTGAAAAGGGGGCTGTTGGGTCTTCCAAGAGTCGAGACAACAC
CCGATCTGTTAATTCTTGTGTTAGACCTAGCAGTTCTGCTTTATCTTCTATTGATAGAGC
AGGTGCTGCATCTAGCAATGGATTATCACGTAGCTCTTCCGTGAGTTCATTATCTTCAGA
AAAATCCACGAAGTCCACATTAAATCCACATGCTAAGGAATTTAAATTTAATCCCAGTGC
AAAGAGCTTTGTCCCATCTCAAGCGACTTTGAGGCCGACATCTCCAGTGTCTGATAATTC
CTTCTACTATCCAGCTGGGATGGCTGCTATGCCACACATGCATGGCATGTCTATGGGCTT
AGGGGTTGGTCCATCGTTTGCTGGACATCAGTCTGTTGTATATAATCCACAGGGTACCCC
TGTGCCACAGCCATATTTTCATCCAAATGGACCTCAGTATGGACAGCAGATGATGATTGG
TCACCCTCGGCAAGTTGTCTACATGCCAACTTATCCCCCTGAGTCACCGTACAAGGGAAG
GGGAGAGTATTGACCAGTTCTTGGTGATCTGCATTGCTTGGTGGCTTAACCCTTTGCTGA
TATTGGAAACAAAATTCTGACAGTAGATTGCATGGATCATTTGTTGGTGCATTAATTCTT
CTGATAAAATAGCTGCAATCTGCACCTGCTGGCTGAAATGGTTTTGTTAGCACTCCTGTA
TAATGACGAATTAATTATTCTGCTTTTCATAATCGTAGTGTTCTAGCTCTTAGGTGTTCT
TTGTCATCATACTACAGATTATTTTTCATCTTTTGGGTTTCTTCAACTTTTTTTTTTCCT
TGGAAAATATTTAACCAGCCTCCTATATTGTCTTATTACATGATAGTTTGGTGTGTAAAA
TGATGGTTCTATGGACAAATCTTTGCAGTTCTTGTCAAGTCTGATTTTAGTATTGGTGTC
ACTTCCT