Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g121720.2.1
CDS Infomation

3-hydroxyisobutyrate dehydrogenase, putative (AHRD V3.3 *** B9S5X5_RICCO)
Sequence

ATGGCAATGTGCTCAACATTTTGTCCCCGGTTATCCTTTCACCTGAATTGCAAAAAATCC
TTATCACTTTTCCCAGTTAAGCATCGCTTCTTTGTTACAATCAAGGCCTTCTCTTCTCAA
ACTTCTGCTCCCAAAGCTGATGATCTTCCAGCAAGTATTGGCTTTTTAGGTCTTGGAATT
ATGGGCAACCCAATGGCTCAAAATCTCATAAAAGCAGGATGTGATGTGACAGTTTGGAAT
AGGACCAAGAGCAAATGTGAACCCCTTATCTCCTTGGGTGCAAAATACAAGTCCTCTCCT
GAGGAGGTTGCAGCATCTTGTGATGTCACATTTGCCATGCTTGCGGACCCTGAGAGTGCA
GCGGATGTTGCTTGTGGAAAATATGGAGCTGCTAAAGGAATGGGTCCAGGAAAAGGTTAT
GTAGATGCCTCAACAGTTGATGGGGAAACATCTAAACTGATCTGTGAACATATTAGAGCT
ACTGGAGCTCATTTTTTGGAGGCTCCAGTATCAGGGTCCAAGAAGCCAGCAGAAGATGGA
CAGCTAATATTTCTCACTGCAGGTGACAGCGTGCTGTATGATAAAGCTGCTCCTCTATTG
GATATCATGGGGAAGTCAAGATTTTACCTTGGTGAAGTTGGTAATGGAGCTGCAATGAAA
CTTGTCGTCAATATGGTTATGGGAAGTATGATGGCCTCATTTGCTGAAGGATTAGTTCTC
AGTGAGAAAGTCGGGCTTGATCCAAGTGTATTAGTGGAGGTGATCTCACAGGGTGCTATT
AGTGCTCCAATGTATGCCGTTAAAGGTCCTTCAATGGTTAAATCTTCGTATCCAACAGCG
TTTCCTCTGAAGCATCAGCAAAAGGACCTTCGTCTAGCTCTGGGTTTAGCGGAATCTGTT
TCACAACCTATTCCAATTGCTGCAGCAACTAATGAACTCTACAAGGTTGCGAAATCTCAT
GGACTTAGTGACCAGGACTTCTCTGCATCTTTGCCTGGTAAGCTTGTGTGCATTATGCTA
TATATCCACCGTGATATGTTAAATCTGTTAGGTTCAAAACTAATGTTTTCATTGTTAGCC
CATTTTAAAGGGTTTCACATGTATTACCTCCTTTCACATTTTTTTCAAAATCTCTCTGGT
ATTTGTTGA

Peptide Sequence

PEP ID

Solyc03g121720.2.1
PEP Infomation

3-hydroxyisobutyrate dehydrogenase, putative (AHRD V3.3 *** B9S5X5_RICCO)
Sequence

MAMCSTFCPRLSFHLNCKKSLSLFPVKHRFFVTIKAFSSQTSAPKADDLPASIGFLGLGI
MGNPMAQNLIKAGCDVTVWNRTKSKCEPLISLGAKYKSSPEEVAASCDVTFAMLADPESA
ADVACGKYGAAKGMGPGKGYVDASTVDGETSKLICEHIRATGAHFLEAPVSGSKKPAEDG
QLIFLTAGDSVLYDKAAPLLDIMGKSRFYLGEVGNGAAMKLVVNMVMGSMMASFAEGLVL
SEKVGLDPSVLVEVISQGAISAPMYAVKGPSMVKSSYPTAFPLKHQQKDLRLALGLAESV
SQPIPIAAATNELYKVAKSHGLSDQDFSASLPGKLVCIMLYIHRDMLNLLGSKLMFSLLA
HFKGFHMYYLLSHFFQNLSGIC*

Transcript Sequence

Transcript ID

Solyc03g121720.2.1
Transcript Infomation

3-hydroxyisobutyrate dehydrogenase, putative (AHRD V3.3 *** B9S5X5_RICCO)
Sequence

GGGTTAGCAAAATGACAAAAGTGTGTCGCTAATAATAGAAGGCAGTAGCAGAATAGGAAA
AGGCATTAATGGGTTAAACCCAATTGCAGTTTGAACATCCTCCTATCCACTTGCACTGTT
CAGGCATGGCAATGTGCTCAACATTTTGTCCCCGGTTATCCTTTCACCTGAATTGCAAAA
AATCCTTATCACTTTTCCCAGTTAAGCATCGCTTCTTTGTTACAATCAAGGCCTTCTCTT
CTCAAACTTCTGCTCCCAAAGCTGATGATCTTCCAGCAAGTATTGGCTTTTTAGGTCTTG
GAATTATGGGCAACCCAATGGCTCAAAATCTCATAAAAGCAGGATGTGATGTGACAGTTT
GGAATAGGACCAAGAGCAAATGTGAACCCCTTATCTCCTTGGGTGCAAAATACAAGTCCT
CTCCTGAGGAGGTTGCAGCATCTTGTGATGTCACATTTGCCATGCTTGCGGACCCTGAGA
GTGCAGCGGATGTTGCTTGTGGAAAATATGGAGCTGCTAAAGGAATGGGTCCAGGAAAAG
GTTATGTAGATGCCTCAACAGTTGATGGGGAAACATCTAAACTGATCTGTGAACATATTA
GAGCTACTGGAGCTCATTTTTTGGAGGCTCCAGTATCAGGGTCCAAGAAGCCAGCAGAAG
ATGGACAGCTAATATTTCTCACTGCAGGTGACAGCGTGCTGTATGATAAAGCTGCTCCTC
TATTGGATATCATGGGGAAGTCAAGATTTTACCTTGGTGAAGTTGGTAATGGAGCTGCAA
TGAAACTTGTCGTCAATATGGTTATGGGAAGTATGATGGCCTCATTTGCTGAAGGATTAG
TTCTCAGTGAGAAAGTCGGGCTTGATCCAAGTGTATTAGTGGAGGTGATCTCACAGGGTG
CTATTAGTGCTCCAATGTATGCCGTTAAAGGTCCTTCAATGGTTAAATCTTCGTATCCAA
CAGCGTTTCCTCTGAAGCATCAGCAAAAGGACCTTCGTCTAGCTCTGGGTTTAGCGGAAT
CTGTTTCACAACCTATTCCAATTGCTGCAGCAACTAATGAACTCTACAAGGTTGCGAAAT
CTCATGGACTTAGTGACCAGGACTTCTCTGCATCTTTGCCTGGTAAGCTTGTGTGCATTA
TGCTATATATCCACCGTGATATGTTAAATCTGTTAGGTTCAAAACTAATGTTTTCATTGT
TAGCCCATTTTAAAGGGTTTCACATGTATTACCTCCTTTCACATTTTTTTCAAAATCTCT
CTGGTATTTGTTGAAACAACGTTAATGATCTTTAATTTGGTTTGGTAAGCAAAGCCTTAC
GAGGAGACAACGTAGTCATTTCCTATCGACTAACTTGGACTTTTAACATAATTACTATAA
TTATTATTGTTGTTGTTGTTGTTTATT