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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g121140.3.1
CDS Infomation

Protein CHUP1, chloroplastic (AHRD V3.3 *** A0A0B2P7K8_GLYSO)
Sequence

ATGGGGAAAGCAAAAAAGGCTCCCAAATTTGCAGTGATGAAGAAAATGGTTACTCACAAA
GCAATCAAGGAGCATAAAGAGGCAGTTTTGAACCCTAATAAGAAAGATTTAACTAAAGAG
AAGCTCCCAAGAAACGTGCCTTATGTTTCTTCTGCACTCTTCTTCAAGTACAACACAGCT
TTAGGGCCGCCGTATCTTGTTTTAGTTGATACTAACTTTATTAATTTCTCTATTCAGAAT
AAATTGGACCTGGAGAAAGGGATGATGGATTGCTTGTATGCCAAATGTACTCCTTGCATT
ACAGACTGTGTCATGGCTGAGCTTGAGAAGCTGGGTCAGAAATACCGTGTTGCTCTTAGA
ATTGCAAAAGATCCCCGATTCGAAAGGCTTCCCTGTACTCACAAAGGGACATATGCCGAT
GATTGTATTGTTGAGAGAGTTACACAGCACAAGTGCTATATTGTCGCAACATGTGATCGA
GATTTGAAACGTAGAATACGCAAGGTCCCTGGTGTACCAATCATGTACATCACTCAACAC
AAGTACTCTATTGAAAGGTTGCCTGAAGCAACGATTGGTGGAGAACTATTATCAGTGCTA
TTAGCTGTAATTCCTCAGCCACAATGTCTCACCGCGAATGAATACACAAAATTGATAATG
GTGAGAGATAATAGGAACATTATAAGGCCTGTTGTCTTCAAAATTGGCGTTGTTTTGGCT
ATATCTCTTGGTGGAATTATCTATACAATTTTCAGAACCAAAAGAATCAAAACCTCCAAA
TCAAATTCATCCTCACCTTCATATGCAACAGGTGGTCAAAATTTTGAGCTCACAAATGAT
ATTGATCATGCCTCCCCTGCAACTCCGTCACCTTCCTCCCGGAAATCAGTTTCTACTGCG
TCAGAGAAACACGAGGACCTTTACATCTCTAAACACATCATTGATAATTCCATAGGTGTT
CCATCTAGTAGTGTTATATTCAACGCGGAGAGAGATGGATTTTTCCTGCCAGAGTTCAAT
GAACTTGTCAAGGAACTTGCTTTATCTACCTCAAAGAGAGACATTGAAACAGTGATGCAG
CATGAAGATTCACCCAGAGAATATAGAATTGTAGAAATTGTTAACCATGAGCAAGAGATT
AAGAGTCTGAAAAACACTGTTAAAACTCTCCAAGAGAGGGAGAGGATTTTAGAGATCCAA
TTGCTCGAGTATTATGGTCTCAAGGAGCAAGAAACTGCTATCATGGAACTTCAAAATCAA
CTAAAAATAAACAATGTGGAGGCCAAGATTTTTGGTCTCAAGATTGAGTCACTGACCGAG
GATAAGATGAGGTTAGAGGCTAAAGTGTCTGATTATGGAAAAGCTGTTTGTGAGCTCGAA
GCTGCAAAAGTCAAGATAAAGCAACTAAAAAAGAAAGTGAGATCAGAAGCTGATCATAGT
AAAGAACATATTTTAGCCCTTCAAGAAAAAGTTATGAAGTTGCATGATCAGGAAAAGAAG
AATGTTGAAGCTGAATCGGATGTCCAGTTAAAGCTCCGAAGACTCGAGGATTTGGAGATT
CAGACTGTTGAGTTGAATAAGTCTAACCAAAGTTTAAGAAAAGAAAATTCAGATCTTGCT
CATAGACTAGAATCTGTTCAGATCATTGCTTCTTCTGTCTTGGAGAACGAAGAAACAGAA
GCACTGAAGAAGGAAACTCTACAGTTGAAAAAGCAAAATGAGGATTTAGCAAAGGATGTT
GAACGTCTTCAAGCAGATCGCTGCACTGATGCTGAGGAACTAGTCTATCTCCGATGGATA
AATGCTTGTTTGCGGCATGAGCTGAGGAACTATCAGCCAGACACAGGTAAGACAATTGCA
AGAGACCTCAGCAAAACATTAAGCCCCAAGTCAGAGGAGAAAGCCAAGCAACTAATTCTT
GAATATGCGAATAAAGAAGAAAGTCAAGGAGAAAGGGAGGTTAATGTTAGTGATCTTGAT
TCCGAATGGTCCTCCTCCCAAACATCCTTTCTTACAGACTCTGTTGAATTTGATGAAACT
TCTACTGATAACTCATCACCCTGTAAGACTCAGTCTTCGAGCAAAAAGAAAGTGTTTAGT
AAGCTTATGAGACTCCTAAGAGGAAAAGGCCGCCCACTTAGTCGAAGTTCTTCTATGGAT
ACGGTGCACACTCTAGAAGATAATGTAGCAGGACATTCTAGTTATTCTCCAGGGTACATA
GATTCCGGTGCTAATGGTCTCAACATCAGGTCAAGAACGTCATCGCAAGGTTCATCCAAA
CAATTTCTGGACCTACATTCTGTGTCTCAAGGTTCAAGGAGCGGCAAATTAGGAGAAAAC
AACAACTATCAGATGAATAGTAGGCAAAATAGTGATGGGGGTTCGTCGTCAGGTTCAAGA
AGATTGGATTCACCTCAAGAGAACACAAGTAAAAATGAGCCTGAGAAAGCAGAATTGCTG
AAGTATGCAAAAGCTTTAAAAGGGTCCCGTTCTAAAATGGGATTTGGCAGGAGATCATCA
TCTGTTAGTTCCTTCTAA

Peptide Sequence

PEP ID

Solyc03g121140.3.1
PEP Infomation

Protein CHUP1, chloroplastic (AHRD V3.3 *** A0A0B2P7K8_GLYSO)
Sequence

MGKAKKAPKFAVMKKMVTHKAIKEHKEAVLNPNKKDLTKEKLPRNVPYVSSALFFKYNTA
LGPPYLVLVDTNFINFSIQNKLDLEKGMMDCLYAKCTPCITDCVMAELEKLGQKYRVALR
IAKDPRFERLPCTHKGTYADDCIVERVTQHKCYIVATCDRDLKRRIRKVPGVPIMYITQH
KYSIERLPEATIGGELLSVLLAVIPQPQCLTANEYTKLIMVRDNRNIIRPVVFKIGVVLA
ISLGGIIYTIFRTKRIKTSKSNSSSPSYATGGQNFELTNDIDHASPATPSPSSRKSVSTA
SEKHEDLYISKHIIDNSIGVPSSSVIFNAERDGFFLPEFNELVKELALSTSKRDIETVMQ
HEDSPREYRIVEIVNHEQEIKSLKNTVKTLQERERILEIQLLEYYGLKEQETAIMELQNQ
LKINNVEAKIFGLKIESLTEDKMRLEAKVSDYGKAVCELEAAKVKIKQLKKKVRSEADHS
KEHILALQEKVMKLHDQEKKNVEAESDVQLKLRRLEDLEIQTVELNKSNQSLRKENSDLA
HRLESVQIIASSVLENEETEALKKETLQLKKQNEDLAKDVERLQADRCTDAEELVYLRWI
NACLRHELRNYQPDTGKTIARDLSKTLSPKSEEKAKQLILEYANKEESQGEREVNVSDLD
SEWSSSQTSFLTDSVEFDETSTDNSSPCKTQSSSKKKVFSKLMRLLRGKGRPLSRSSSMD
TVHTLEDNVAGHSSYSPGYIDSGANGLNIRSRTSSQGSSKQFLDLHSVSQGSRSGKLGEN
NNYQMNSRQNSDGGSSSGSRRLDSPQENTSKNEPEKAELLKYAKALKGSRSKMGFGRRSS
SVSSF*

Transcript Sequence

Transcript ID

Solyc03g121140.3.1
Transcript Infomation

Protein CHUP1, chloroplastic (AHRD V3.3 *** A0A0B2P7K8_GLYSO)
Sequence

AAACACCGGCTCCAACTATACGCACCTTGACCCGCTCTATATCACGTTAGGGTTTTGAGA
ATTGGAGCACATTCTTGAAATTGCACTGCAGAACCCCTTTGTCCAGTTTCAGATTTTTGA
GAACCAAAAATGGGGAAAGCAAAAAAGGCTCCCAAATTTGCAGTGATGAAGAAAATGGTT
ACTCACAAAGCAATCAAGGAGCATAAAGAGGCAGTTTTGAACCCTAATAAGAAAGATTTA
ACTAAAGAGAAGCTCCCAAGAAACGTGCCTTATGTTTCTTCTGCACTCTTCTTCAAGTAC
AACACAGCTTTAGGGCCGCCGTATCTTGTTTTAGTTGATACTAACTTTATTAATTTCTCT
ATTCAGAATAAATTGGACCTGGAGAAAGGGATGATGGATTGCTTGTATGCCAAATGTACT
CCTTGCATTACAGACTGTGTCATGGCTGAGCTTGAGAAGCTGGGTCAGAAATACCGTGTT
GCTCTTAGAATTGCAAAAGATCCCCGATTCGAAAGGCTTCCCTGTACTCACAAAGGGACA
TATGCCGATGATTGTATTGTTGAGAGAGTTACACAGCACAAGTGCTATATTGTCGCAACA
TGTGATCGAGATTTGAAACGTAGAATACGCAAGGTCCCTGGTGTACCAATCATGTACATC
ACTCAACACAAGTACTCTATTGAAAGGTTGCCTGAAGCAACGATTGGTGGAGAACTATTA
TCAGTGCTATTAGCTGTAATTCCTCAGCCACAATGTCTCACCGCGAATGAATACACAAAA
TTGATAATGGTGAGAGATAATAGGAACATTATAAGGCCTGTTGTCTTCAAAATTGGCGTT
GTTTTGGCTATATCTCTTGGTGGAATTATCTATACAATTTTCAGAACCAAAAGAATCAAA
ACCTCCAAATCAAATTCATCCTCACCTTCATATGCAACAGGTGGTCAAAATTTTGAGCTC
ACAAATGATATTGATCATGCCTCCCCTGCAACTCCGTCACCTTCCTCCCGGAAATCAGTT
TCTACTGCGTCAGAGAAACACGAGGACCTTTACATCTCTAAACACATCATTGATAATTCC
ATAGGTGTTCCATCTAGTAGTGTTATATTCAACGCGGAGAGAGATGGATTTTTCCTGCCA
GAGTTCAATGAACTTGTCAAGGAACTTGCTTTATCTACCTCAAAGAGAGACATTGAAACA
GTGATGCAGCATGAAGATTCACCCAGAGAATATAGAATTGTAGAAATTGTTAACCATGAG
CAAGAGATTAAGAGTCTGAAAAACACTGTTAAAACTCTCCAAGAGAGGGAGAGGATTTTA
GAGATCCAATTGCTCGAGTATTATGGTCTCAAGGAGCAAGAAACTGCTATCATGGAACTT
CAAAATCAACTAAAAATAAACAATGTGGAGGCCAAGATTTTTGGTCTCAAGATTGAGTCA
CTGACCGAGGATAAGATGAGGTTAGAGGCTAAAGTGTCTGATTATGGAAAAGCTGTTTGT
GAGCTCGAAGCTGCAAAAGTCAAGATAAAGCAACTAAAAAAGAAAGTGAGATCAGAAGCT
GATCATAGTAAAGAACATATTTTAGCCCTTCAAGAAAAAGTTATGAAGTTGCATGATCAG
GAAAAGAAGAATGTTGAAGCTGAATCGGATGTCCAGTTAAAGCTCCGAAGACTCGAGGAT
TTGGAGATTCAGACTGTTGAGTTGAATAAGTCTAACCAAAGTTTAAGAAAAGAAAATTCA
GATCTTGCTCATAGACTAGAATCTGTTCAGATCATTGCTTCTTCTGTCTTGGAGAACGAA
GAAACAGAAGCACTGAAGAAGGAAACTCTACAGTTGAAAAAGCAAAATGAGGATTTAGCA
AAGGATGTTGAACGTCTTCAAGCAGATCGCTGCACTGATGCTGAGGAACTAGTCTATCTC
CGATGGATAAATGCTTGTTTGCGGCATGAGCTGAGGAACTATCAGCCAGACACAGGTAAG
ACAATTGCAAGAGACCTCAGCAAAACATTAAGCCCCAAGTCAGAGGAGAAAGCCAAGCAA
CTAATTCTTGAATATGCGAATAAAGAAGAAAGTCAAGGAGAAAGGGAGGTTAATGTTAGT
GATCTTGATTCCGAATGGTCCTCCTCCCAAACATCCTTTCTTACAGACTCTGTTGAATTT
GATGAAACTTCTACTGATAACTCATCACCCTGTAAGACTCAGTCTTCGAGCAAAAAGAAA
GTGTTTAGTAAGCTTATGAGACTCCTAAGAGGAAAAGGCCGCCCACTTAGTCGAAGTTCT
TCTATGGATACGGTGCACACTCTAGAAGATAATGTAGCAGGACATTCTAGTTATTCTCCA
GGGTACATAGATTCCGGTGCTAATGGTCTCAACATCAGGTCAAGAACGTCATCGCAAGGT
TCATCCAAACAATTTCTGGACCTACATTCTGTGTCTCAAGGTTCAAGGAGCGGCAAATTA
GGAGAAAACAACAACTATCAGATGAATAGTAGGCAAAATAGTGATGGGGGTTCGTCGTCA
GGTTCAAGAAGATTGGATTCACCTCAAGAGAACACAAGTAAAAATGAGCCTGAGAAAGCA
GAATTGCTGAAGTATGCAAAAGCTTTAAAAGGGTCCCGTTCTAAAATGGGATTTGGCAGG
AGATCATCATCTGTTAGTTCCTTCTAACATTTGTGTTTGCTCAAACTGTCACAGAGGTGG
AATCAT