Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc03g121110.3.1
CDS Infomation	Pentatricopeptide repeat-containing family protein (AHRD V3.3 *** U5FXJ6_POPTR)
Sequence	ATGCAGCTCAGGCATCCCTGTCACCGGCTCCGGCTGATTTACCGGCAGCAGTTCCGATAC TTGGCCACCAAGTACAGTGGCAGAGTAGTGGTGGAAGCTGAAGATGGCCGTTCATTCGCC GTCGAAGTGGATGCCCCTACTCTTCACACCGACTCCAGAGGCTATGCTCTCCCCCGCCGT GACCTAATCTGTAAGGTCTCCCAGATTCTTAAGTCACGTCCTTCCCCTTCTTCTGATCCT TTCCTTGACTTATCTGACTATCTGGATACATTGACAATAACCCTAACTCCCTCTGAAGCT TCTGAAGTTCTCAAATCCCTCAAGTCTCCAAACCTTGCTCTTCGCTTCTTCCGATTTTGC CCCTCTGAAATCCCTAAATTCCGCCATGACTGCTTCACTTACAACCGCATCCTTCTCATC CTCTCCAAATCTTCTCTTCCGAACCGGCTCGATTGCGTCCGCGAGATTGTTGATGAAATG GAACGCACTGGTATTCGGGGAAACATATCCACTGTTAATCTTCTTATTGGTACATTTGGT GACGGCCAAGGGAATGGTGTTAATGAGCTAACTAGGTGTTTGGGGTTGGTTCAAAAATGG GATTTGAAGTTGAATTGCTATAGTTATAAGTGTCTTTTACAAGCCTATATCAGATTGTGC AATCCCGACAAGGCTTTGGAAGTTTACCAACAAATGAGGAGACGTGGGTACAGATTGGAT ATATTTGCATACAACATGCTTCTTGATGCTCTTGCTAGGGACCAAAAGGTTGATCAGGTC CACAAGGTTTTCGAGGACATGAAGAAGTGGCACTGCGAACCTGATGAATATACGTATACC ATTCTGATTAGAATGACTGGGAAATTAGGGAAGCCCGGGGAATCACTTTCTTTCTTTTTG GAAATGCTGTCTAACGGTATTTCACCAAATTTAATTGCTTATAATACTATGATCGAAGCT CTTGCCAAAGGCCATATGGTTGATAAGAGTATCTTCGTCTTCTCTAAGATGGTGGAGAAT AGTTGCCGGCCCAATGAATTTACTTACAGTATTATTTTAAATGTATTGGCCGCAGAAGGG CAACTTGGAAGACTTGATGAAGTTGTGGAAATATCTAAGAGATACATGAATAAATCGATA TACGCATATCTTGTTAGAACGTTGAGTAAAATAGGCCATGCAAGCGAAGCTCATAGGTTG TTTTGCAATATGTGGAGCTTCCATGATAGAGGAGATCGTGATGCCTACTTGTCCATGTTA GAGAGCTTATGCAACTCTAAGAAAGTAACTGAGGCTATTGATTTGCTGAATAAGATGAAT GAAAAGGGAGTACAAGCAGATAGCTTCATGTATAATACCGTCTTCTCTGCACTTGGGAAG CTAAAGCAGATTCCTCATCTTCATGATCTCTATGAAAAGATGAAACGGGATGGCCCCACA CCAGACATATTTACTTATAACATTTTGATATCTAGCTTTGGTAGAGCGGGGGAGGTTGGG GAAGCTCTCAAGATTTTTGAAGAACTTGAGAATAGCAATTGTAAACCTGATATTGTCTCC TACAACTCCTTGATAAATTGTCTGGGAAAGAACGGAGACATTGATGAAGCACACATGAAA TTCATTGAGATGCAGGAGAAGGGCTTGAATCCTGATGTTGTAACATACAGCACTCTCATT GAGTGCTTTGGGAAGACTGAAAAAGTTGAGATGGCACGTCGGCTATTCGATGAAATGCTT GCAGCTGGCTGTTATCCTAACATAGTGACATACAATATCTTACTTGACTGTCTCGAGAGA AGTGGGAGAACTTCAGAAGCTGTTAGTTTATATGCAAAACTGAAGGAACAAGGTTTGGCA GCTGATTCAATCACATACACCATCCTTGAACGTTTACAAAGTGGTTCTCATAGAACATCA AGAGTTCGCAGAAAAAATCCTATCACCGGTTGGGTGGTTAGCCCATTAAGGTGGCATGTA AACAAGGATTAG

Peptide Sequence

PEP ID	Solyc03g121110.3.1
PEP Infomation	Pentatricopeptide repeat-containing family protein (AHRD V3.3 *** U5FXJ6_POPTR)
Sequence	MQLRHPCHRLRLIYRQQFRYLATKYSGRVVVEAEDGRSFAVEVDAPTLHTDSRGYALPRR DLICKVSQILKSRPSPSSDPFLDLSDYLDTLTITLTPSEASEVLKSLKSPNLALRFFRFC PSEIPKFRHDCFTYNRILLILSKSSLPNRLDCVREIVDEMERTGIRGNISTVNLLIGTFG DGQGNGVNELTRCLGLVQKWDLKLNCYSYKCLLQAYIRLCNPDKALEVYQQMRRRGYRLD IFAYNMLLDALARDQKVDQVHKVFEDMKKWHCEPDEYTYTILIRMTGKLGKPGESLSFFL EMLSNGISPNLIAYNTMIEALAKGHMVDKSIFVFSKMVENSCRPNEFTYSIILNVLAAEG QLGRLDEVVEISKRYMNKSIYAYLVRTLSKIGHASEAHRLFCNMWSFHDRGDRDAYLSML ESLCNSKKVTEAIDLLNKMNEKGVQADSFMYNTVFSALGKLKQIPHLHDLYEKMKRDGPT PDIFTYNILISSFGRAGEVGEALKIFEELENSNCKPDIVSYNSLINCLGKNGDIDEAHMK FIEMQEKGLNPDVVTYSTLIECFGKTEKVEMARRLFDEMLAAGCYPNIVTYNILLDCLER SGRTSEAVSLYAKLKEQGLAADSITYTILERLQSGSHRTSRVRRKNPITGWVVSPLRWHV NKD*

Transcript Sequence

Transcript ID	Solyc03g121110.3.1
Transcript Infomation	Pentatricopeptide repeat-containing family protein (AHRD V3.3 *** U5FXJ6_POPTR)
Sequence	ATGCAGCTCAGGCATCCCTGTCACCGGCTCCGGCTGATTTACCGGCAGCAGTTCCGATAC TTGGCCACCAAGTACAGTGGCAGAGTAGTGGTGGAAGCTGAAGATGGCCGTTCATTCGCC GTCGAAGTGGATGCCCCTACTCTTCACACCGACTCCAGAGGCTATGCTCTCCCCCGCCGT GACCTAATCTGTAAGGTCTCCCAGATTCTTAAGTCACGTCCTTCCCCTTCTTCTGATCCT TTCCTTGACTTATCTGACTATCTGGATACATTGACAATAACCCTAACTCCCTCTGAAGCT TCTGAAGTTCTCAAATCCCTCAAGTCTCCAAACCTTGCTCTTCGCTTCTTCCGATTTTGC CCCTCTGAAATCCCTAAATTCCGCCATGACTGCTTCACTTACAACCGCATCCTTCTCATC CTCTCCAAATCTTCTCTTCCGAACCGGCTCGATTGCGTCCGCGAGATTGTTGATGAAATG GAACGCACTGGTATTCGGGGAAACATATCCACTGTTAATCTTCTTATTGGTACATTTGGT GACGGCCAAGGGAATGGTGTTAATGAGCTAACTAGGTGTTTGGGGTTGGTTCAAAAATGG GATTTGAAGTTGAATTGCTATAGTTATAAGTGTCTTTTACAAGCCTATATCAGATTGTGC AATCCCGACAAGGCTTTGGAAGTTTACCAACAAATGAGGAGACGTGGGTACAGATTGGAT ATATTTGCATACAACATGCTTCTTGATGCTCTTGCTAGGGACCAAAAGGTTGATCAGGTC CACAAGGTTTTCGAGGACATGAAGAAGTGGCACTGCGAACCTGATGAATATACGTATACC ATTCTGATTAGAATGACTGGGAAATTAGGGAAGCCCGGGGAATCACTTTCTTTCTTTTTG GAAATGCTGTCTAACGGTATTTCACCAAATTTAATTGCTTATAATACTATGATCGAAGCT CTTGCCAAAGGCCATATGGTTGATAAGAGTATCTTCGTCTTCTCTAAGATGGTGGAGAAT AGTTGCCGGCCCAATGAATTTACTTACAGTATTATTTTAAATGTATTGGCCGCAGAAGGG CAACTTGGAAGACTTGATGAAGTTGTGGAAATATCTAAGAGATACATGAATAAATCGATA TACGCATATCTTGTTAGAACGTTGAGTAAAATAGGCCATGCAAGCGAAGCTCATAGGTTG TTTTGCAATATGTGGAGCTTCCATGATAGAGGAGATCGTGATGCCTACTTGTCCATGTTA GAGAGCTTATGCAACTCTAAGAAAGTAACTGAGGCTATTGATTTGCTGAATAAGATGAAT GAAAAGGGAGTACAAGCAGATAGCTTCATGTATAATACCGTCTTCTCTGCACTTGGGAAG CTAAAGCAGATTCCTCATCTTCATGATCTCTATGAAAAGATGAAACGGGATGGCCCCACA CCAGACATATTTACTTATAACATTTTGATATCTAGCTTTGGTAGAGCGGGGGAGGTTGGG GAAGCTCTCAAGATTTTTGAAGAACTTGAGAATAGCAATTGTAAACCTGATATTGTCTCC TACAACTCCTTGATAAATTGTCTGGGAAAGAACGGAGACATTGATGAAGCACACATGAAA TTCATTGAGATGCAGGAGAAGGGCTTGAATCCTGATGTTGTAACATACAGCACTCTCATT GAGTGCTTTGGGAAGACTGAAAAAGTTGAGATGGCACGTCGGCTATTCGATGAAATGCTT GCAGCTGGCTGTTATCCTAACATAGTGACATACAATATCTTACTTGACTGTCTCGAGAGA AGTGGGAGAACTTCAGAAGCTGTTAGTTTATATGCAAAACTGAAGGAACAAGGTTTGGCA GCTGATTCAATCACATACACCATCCTTGAACGTTTACAAAGTGGTTCTCATAGAACATCA AGAGTTCGCAGAAAAAATCCTATCACCGGTTGGGTGGTTAGCCCATTAAGGTGGCATGTA AACAAGGATTAGATTAAGATGCTCATGATTACACGCTTAAAGGTTGAGCTTTCGCTTGAG CCAGCATGGTGCTAAAGTGACCTGACATTGAATTTATACTGAGAACTCTGTTGATGAGGA TTTAAACTGTCTCAAAGAGTGACCTGCTGTAGACGACATGAACTGTTTCTTATGTGAAAG TAGTTACAAGATCTCATCTCTTTGTTAGAGAGGCAACTGTATATTGGTGAAATTGCACCA ATCACTCATGTTGCCAAAGTTGGGATGAGAAGTGAATAGAAGACGGTTACAAGTGCGAAG CTGGTTATTTGTAGAACTAGAACTGGCACTGTTTCTGGAAATCAAATATTTAACTGAACC GATCAATTGTTTTGAGGTGAAAAGTGAATCAGTAAGCAGGGTCAGGTCACAGGTGGGAAG GTGTTTTGTTTTTAGCTCTGGAAATTATCTATTTTTGCATCTTGCTGTCGATGAATGTAT CATATTGTGGGTGTATAACTATATGTGCTATTTGGATTCATTATTTTAAGCTCCCACTTG GAGTGATTGTTCCTGAACCAGTTCTCCATCCCAATCTGCATTTGTATATTTTTTGTGTTC AAGACTGAACAATTAGTGAAAATTTTCAG