Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc03g120770.3.1
CDS Infomation	Phox-associated domain,Phox-like,Sorting nexin isoform 1 (AHRD V3.3 *** A0A061GBL5_THECC)
Sequence	ATGGGTACCACCCAAGGGCAGGCCGTGACGGTTCGGGACCTGGTTGAAGAAGCTAAAAAG CGGATTGTAATCTTGCTCCTATGTGTCATTGGACTTTCGTATATCATGTCTCTAACGAGC TCTTCAGTTTTTATCAACTTGCCTGCAGCTGCTCTCCTAATTGTTATGCTTCGCTATCTA TCTCTGGACTTTGATGCACAAATAAAAGCTGCTACATATAAAAGCAAGTCATCCTCATTA AATAATACTGTTCAGAAGAAACAGTTAGATGGTCCAAGATCAGTTAATGAGAAATCTGAT TGGAGGAAAAAAGTAGATTCACCTGTTGTGGAAGATGCAATTGACCACTTCACCAGACAC ATAGTCTCTGAGTGGGTGACAGATCTCTGGTACTGCCGTATAACTTCTGATAGACAGGGT CCAGAGGAACTTGTGCAGATCATGAATGGCGTGCTAGGGGAAATTTCAAATCGGATGAGA TCCATCAATCTTATAGATCTTTTAACAAGGGATATTGTCAGTCTAATATGCACTCATTTG GAATTGTTCCGTACATGCAAATTGAGGATTGAAAAAAAGAATACAAGATCCTTGACTATA GAAGAGCGAGATCTGGAACTTAAACTGACGCTGGCAGCAGATGACAAGTTACATCCGGCT TTGTTTTCTCCAGAAGCTGAACACAAGGTTCTCCAGCATCTTATGGATGGTCTCATTTCG TTCACGTTCAGACCAGAGGACTTGCAATGCTCTTTATTCCGATACATTGTGAGGGAACTT CTTGCTTGCGTTGTGATACGACCAGTACTGAATTTAGTTAACCCTAGGTTCATTAATGAG AGGATTGAATCTCTAGCTATTTCCTTAAAGAAGGCTGATAAAGGACCTACTGCAGCTCAA ACAGAACAGCAATCAAGTCCAAGTGTATCTGAAAAGGTATCAGCAGATCATTTTTCTGGG GTGTTGGATTCTTCTGCGAAGGGTCTTGAACTTGTTCAGTTTAGAAGGAACCAAACTAAT GACACTACGGAGAATAATACGATGGACAATGGGAATGGATCAGATTTGTCAAAGGATCCT TTGCTTTCGATTGATACACGGTCTACTCGTTCTTGGAGTTCTTTGCCATCACAAACCAAC ACAGATGATGGGAGAGGTCTCCAGAAACACCGCTCTGGAGAGTGGGGTGAAATGCTAGAT TTGGTGTCACGTCGAAAGACTGAAACCCTGGCTCCAGAGAACTTAGACAACATGTGGACT AAAGGAAGAAACTATAAAAGGAAAGAAGAGGGCAATCTAGCATCAGATTCACTCCAACAT AATTCTTTGCTAGGGCCACCTAAATCACAGGAGCACTTGAAGGGAATGCTAAGACAGAAA GAGAGTGAGAGTGAAAATTGGGTTAACGTGAACCATTATTTGAAAGCTAATACCCAGACT TTTCAATATCAAGAGGAAGATGAGCACAACTCAGATGAGGTCGAATCAGAGAGCACTAGT TCTTACACTACTGATGATGAGGAACCTATTAGTGTGACAGGTCTTGATTCTCCTGGTAAT AAAGTGTGGGATGCCAAAAATAGAAGGAATATCAATCACATTCATCATCCACTTGAAAAT AATGCTGGTCATAAGACAAGAAAGGGAAAAGCTAGCAAAGGTCATATTCGCTCTAAGCAC TTAAATAAAGTACCATCTGCGAGGAAAAAATCCAGAGCAAGTAGCCAAACAGAGCATGTA TGGCAAGAGATTCAAAGATCGAGCTTCTTATTAGGGGATGGACATGATATATTAAACTCT AAATATAATGAGAAACCAGAAGTTCTGAGCGATCACTCTGATTCAGAAATGCCTGGTAGA ATTTCAAGTGGCACCAATGCATCAGCATCTTCTTTGTCAAGCAGCGTTCTCGCTAATCAG AAAATGGGTGCTAATTCTCTTAAAAGTTCTATAATTGCTGATTCCTTTTTGAAGTTAACG TGTGAGGTCTTGAGTGCCAATATTGTAAAGAGTGGCTCAAAAACTTTTGCCGTTTATTGC TTATCTGTTACAGATGTGAACAATCATAGCTGGTCCATCAAAAGAAGGTTTCGTCATTTT GAGGAGCTACACAGACGTCTTAAGGAGTATCCTGAGTACAATCTTCATTTGCCACCCAAA CATTTTCTCTCCACAGGTCTGGATGTTCAAGTCATTCGAGAAAGATGCAAATTTCTTAAA GAATATATGAAGAAACTGCTGCAGCTCCCGAGTGTTTCCAACTCCATTGAGGTTTGGGAC TTCCTCAGTGTTGATTCACAGACATATAGCTTTTCAAATTCCCTTTCCATAATCGATACA TTACCAGCTAACCTCGATGATACAGTACACAAAGTAAATAAAGAACCTCTGCCCAAGATT GGCCCAAGAACTGATATCATATTCTCCACGGCAGAGCATTATGCAGAAAGGAAGGACCGA GTCTTGATGCATCATCCTGTGGTGGATGAATCAAGATATGGCAAAAAATATGTCACACTG TCCCCTCCAAAAAGACCCACCAAAGGAGCTTTTGAGGATTCAAGTAATGGCTCCGACAAT GTACAAACAAATAAAGTTCCAATCCCAGCCACAGGAACGGTGCTAAAATCAGTTGAAACT AATTCACGCGCCTCACATGGATCATCCGATACCTTTGTTGATTCTCCTGTTGAATCCTCC CTTCCCTTAGAGTGGGTGCCTCCACAGGTAAGTGCACCAGTTCTAGACCTGGTTGATGTC ATTTTTCAGCTCCAAGATGGTGGATGGATCAGGAGAAAGGCATTCTGGGTGGCGAAACAG GTTTTACAATTAGGAATGGGTGATGCATTTGATGACTGGCTCATTGGGAAAATCCAGCGT CTGCGCAGGGGTTCAGTAGTGGCTGCAGGCATTAGACGTATTGAGCAGGCAAGTATTTTA TGGCCTGATGGAATATTCATAACAAAGCATCCAAGTCGACAACGTCCTACACCATCTGCC ATTCAATCTGTTGGTTCTCCACAAAACCATCCTCCTACTCCATCTGCCAGTCCATCCATT GGTTCTCCACAAAACCAACCTCCTACTCCATCATCATCACCAATGGCAGAGGATATCCGG AAACTGGATGAGAAGCAACAGAAGGAAGCTGAACAGCGTGCAAACCTAGTATATGAGCTG ATGATTGAAAAAGCGCCTGCTGCTGTTGTTGGACTAGTTGGTCACAAGGAATATGAGCAA TGCGCAAAGGATCTTTATTACTTCATCCAGTCATCTGTGTGTCTAAAGCTGTTAGTCCTT GATCTTCTTGAGCTGATACTACTGTCCGCTTTCCCGGAGCTGGATGGCGTATTCAACACA TTGCATCAAGAGAAGAGGAAGTTTGGAGAGCTCAAAATAGATTAG

Peptide Sequence

PEP ID	Solyc03g120770.3.1
PEP Infomation	Phox-associated domain,Phox-like,Sorting nexin isoform 1 (AHRD V3.3 *** A0A061GBL5_THECC)
Sequence	MGTTQGQAVTVRDLVEEAKKRIVILLLCVIGLSYIMSLTSSSVFINLPAAALLIVMLRYL SLDFDAQIKAATYKSKSSSLNNTVQKKQLDGPRSVNEKSDWRKKVDSPVVEDAIDHFTRH IVSEWVTDLWYCRITSDRQGPEELVQIMNGVLGEISNRMRSINLIDLLTRDIVSLICTHL ELFRTCKLRIEKKNTRSLTIEERDLELKLTLAADDKLHPALFSPEAEHKVLQHLMDGLIS FTFRPEDLQCSLFRYIVRELLACVVIRPVLNLVNPRFINERIESLAISLKKADKGPTAAQ TEQQSSPSVSEKVSADHFSGVLDSSAKGLELVQFRRNQTNDTTENNTMDNGNGSDLSKDP LLSIDTRSTRSWSSLPSQTNTDDGRGLQKHRSGEWGEMLDLVSRRKTETLAPENLDNMWT KGRNYKRKEEGNLASDSLQHNSLLGPPKSQEHLKGMLRQKESESENWVNVNHYLKANTQT FQYQEEDEHNSDEVESESTSSYTTDDEEPISVTGLDSPGNKVWDAKNRRNINHIHHPLEN NAGHKTRKGKASKGHIRSKHLNKVPSARKKSRASSQTEHVWQEIQRSSFLLGDGHDILNS KYNEKPEVLSDHSDSEMPGRISSGTNASASSLSSSVLANQKMGANSLKSSIIADSFLKLT CEVLSANIVKSGSKTFAVYCLSVTDVNNHSWSIKRRFRHFEELHRRLKEYPEYNLHLPPK HFLSTGLDVQVIRERCKFLKEYMKKLLQLPSVSNSIEVWDFLSVDSQTYSFSNSLSIIDT LPANLDDTVHKVNKEPLPKIGPRTDIIFSTAEHYAERKDRVLMHHPVVDESRYGKKYVTL SPPKRPTKGAFEDSSNGSDNVQTNKVPIPATGTVLKSVETNSRASHGSSDTFVDSPVESS LPLEWVPPQVSAPVLDLVDVIFQLQDGGWIRRKAFWVAKQVLQLGMGDAFDDWLIGKIQR LRRGSVVAAGIRRIEQASILWPDGIFITKHPSRQRPTPSAIQSVGSPQNHPPTPSASPSI GSPQNQPPTPSSSPMAEDIRKLDEKQQKEAEQRANLVYELMIEKAPAAVVGLVGHKEYEQ CAKDLYYFIQSSVCLKLLVLDLLELILLSAFPELDGVFNTLHQEKRKFGELKID*

Transcript Sequence

Transcript ID	Solyc03g120770.3.1
Transcript Infomation	Phox-associated domain,Phox-like,Sorting nexin isoform 1 (AHRD V3.3 *** A0A061GBL5_THECC)
Sequence	CACGTGATTGTTACTTACTATTGTTTTGTTTAGGTAAATGGACAAATAAAGATGGTATTC TATTTCAAGTAGCATGTGTGTGCTACTTAGCTCCATAACAAATAGTAGCACAAAAGGTAA CAGTTCACAAAATATTTTATAAATGAATGTGTAAAATAGCATATTATCAAAAATAAAATA CGAGAAGGTTGTTCAAAATCTTTAGCTCAACCTTCAAAACGGAATTGTATTTATTGTGAG TGAATCAACAAAAAATATAATATAAATCTAAAATCACATAAAATGAAATTACTTTAAATT TAAAGATTTTTAAAAATAAAAAATAAAATAGAATTTATAAAATTGCGCATCTGCTCTCTT CTCTACTTTGGCTCACCCAAATCAGAGGGAAAAAGGTCCCGATCGTAATTTCCAATAAAT TTGTCACTAGAAATTTACAATTAGATTACATGCATCTAAGTGAGGATGTGCATTTCTCTT TGGGACAAATCAGCATTAGTTATTGCCCAACAGAATTCAAGGTGTGAAATGACGAAAATA GACACATGACACACGTATATTGCCCCTATTCAAGTTTCGAATCAATCAAACCGGACGATC CCGTCACTCCCCCCCCATTCCCCACGCGGCGTTCCCTCCTCTTCTTCAAGCCGTCAATCA AAAACTCTGAAGCACTAGTTGAACTTGCACCACTTCCATTCAGTTGAACATTTCGCTTAC AGAGAAGTTAGAGCGAGAAAAAGTTTTTTTTTCTAGAGAGAGAAAACATCACTGGTACCT CTAAAACCTATCAATCTTCGTTTAATCATTTTCGGATTGTGTTTTTTTTAATTCTACAGC GTGATCTTATGCGGATGAGAATGTGCGTCGATTTGTTGCTGTTTCAATTGATGAGAATTG GGAAATTCAGAAGTTGAATTGGTTGAGTTTCTATTTCTGTTTGTTGTGAATTGGATTGAA GGTTGTTGTGTTGGTGTGAAGGATTTGATCGGGGGAGGTCCGACATGGGTACCACCCAAG GGCAGGCCGTGACGGTTCGGGACCTGGTTGAAGAAGCTAAAAAGCGGATTGTAATCTTGC TCCTATGTGTCATTGGACTTTCGTATATCATGTCTCTAACGAGCTCTTCAGTTTTTATCA ACTTGCCTGCAGCTGCTCTCCTAATTGTTATGCTTCGCTATCTATCTCTGGACTTTGATG CACAAATAAAAGCTGCTACATATAAAAGCAAGTCATCCTCATTAAATAATACTGTTCAGA AGAAACAGTTAGATGGTCCAAGATCAGTTAATGAGAAATCTGATTGGAGGAAAAAAGTAG ATTCACCTGTTGTGGAAGATGCAATTGACCACTTCACCAGACACATAGTCTCTGAGTGGG TGACAGATCTCTGGTACTGCCGTATAACTTCTGATAGACAGGGTCCAGAGGAACTTGTGC AGATCATGAATGGCGTGCTAGGGGAAATTTCAAATCGGATGAGATCCATCAATCTTATAG ATCTTTTAACAAGGGATATTGTCAGTCTAATATGCACTCATTTGGAATTGTTCCGTACAT GCAAATTGAGGATTGAAAAAAAGAATACAAGATCCTTGACTATAGAAGAGCGAGATCTGG AACTTAAACTGACGCTGGCAGCAGATGACAAGTTACATCCGGCTTTGTTTTCTCCAGAAG CTGAACACAAGGTTCTCCAGCATCTTATGGATGGTCTCATTTCGTTCACGTTCAGACCAG AGGACTTGCAATGCTCTTTATTCCGATACATTGTGAGGGAACTTCTTGCTTGCGTTGTGA TACGACCAGTACTGAATTTAGTTAACCCTAGGTTCATTAATGAGAGGATTGAATCTCTAG CTATTTCCTTAAAGAAGGCTGATAAAGGACCTACTGCAGCTCAAACAGAACAGCAATCAA GTCCAAGTGTATCTGAAAAGGTATCAGCAGATCATTTTTCTGGGGTGTTGGATTCTTCTG CGAAGGGTCTTGAACTTGTTCAGTTTAGAAGGAACCAAACTAATGACACTACGGAGAATA ATACGATGGACAATGGGAATGGATCAGATTTGTCAAAGGATCCTTTGCTTTCGATTGATA CACGGTCTACTCGTTCTTGGAGTTCTTTGCCATCACAAACCAACACAGATGATGGGAGAG GTCTCCAGAAACACCGCTCTGGAGAGTGGGGTGAAATGCTAGATTTGGTGTCACGTCGAA AGACTGAAACCCTGGCTCCAGAGAACTTAGACAACATGTGGACTAAAGGAAGAAACTATA AAAGGAAAGAAGAGGGCAATCTAGCATCAGATTCACTCCAACATAATTCTTTGCTAGGGC CACCTAAATCACAGGAGCACTTGAAGGGAATGCTAAGACAGAAAGAGAGTGAGAGTGAAA ATTGGGTTAACGTGAACCATTATTTGAAAGCTAATACCCAGACTTTTCAATATCAAGAGG AAGATGAGCACAACTCAGATGAGGTCGAATCAGAGAGCACTAGTTCTTACACTACTGATG ATGAGGAACCTATTAGTGTGACAGGTCTTGATTCTCCTGGTAATAAAGTGTGGGATGCCA AAAATAGAAGGAATATCAATCACATTCATCATCCACTTGAAAATAATGCTGGTCATAAGA CAAGAAAGGGAAAAGCTAGCAAAGGTCATATTCGCTCTAAGCACTTAAATAAAGTACCAT CTGCGAGGAAAAAATCCAGAGCAAGTAGCCAAACAGAGCATGTATGGCAAGAGATTCAAA GATCGAGCTTCTTATTAGGGGATGGACATGATATATTAAACTCTAAATATAATGAGAAAC CAGAAGTTCTGAGCGATCACTCTGATTCAGAAATGCCTGGTAGAATTTCAAGTGGCACCA ATGCATCAGCATCTTCTTTGTCAAGCAGCGTTCTCGCTAATCAGAAAATGGGTGCTAATT CTCTTAAAAGTTCTATAATTGCTGATTCCTTTTTGAAGTTAACGTGTGAGGTCTTGAGTG CCAATATTGTAAAGAGTGGCTCAAAAACTTTTGCCGTTTATTGCTTATCTGTTACAGATG TGAACAATCATAGCTGGTCCATCAAAAGAAGGTTTCGTCATTTTGAGGAGCTACACAGAC GTCTTAAGGAGTATCCTGAGTACAATCTTCATTTGCCACCCAAACATTTTCTCTCCACAG GTCTGGATGTTCAAGTCATTCGAGAAAGATGCAAATTTCTTAAAGAATATATGAAGAAAC TGCTGCAGCTCCCGAGTGTTTCCAACTCCATTGAGGTTTGGGACTTCCTCAGTGTTGATT CACAGACATATAGCTTTTCAAATTCCCTTTCCATAATCGATACATTACCAGCTAACCTCG ATGATACAGTACACAAAGTAAATAAAGAACCTCTGCCCAAGATTGGCCCAAGAACTGATA TCATATTCTCCACGGCAGAGCATTATGCAGAAAGGAAGGACCGAGTCTTGATGCATCATC CTGTGGTGGATGAATCAAGATATGGCAAAAAATATGTCACACTGTCCCCTCCAAAAAGAC CCACCAAAGGAGCTTTTGAGGATTCAAGTAATGGCTCCGACAATGTACAAACAAATAAAG TTCCAATCCCAGCCACAGGAACGGTGCTAAAATCAGTTGAAACTAATTCACGCGCCTCAC ATGGATCATCCGATACCTTTGTTGATTCTCCTGTTGAATCCTCCCTTCCCTTAGAGTGGG TGCCTCCACAGGTAAGTGCACCAGTTCTAGACCTGGTTGATGTCATTTTTCAGCTCCAAG ATGGTGGATGGATCAGGAGAAAGGCATTCTGGGTGGCGAAACAGGTTTTACAATTAGGAA TGGGTGATGCATTTGATGACTGGCTCATTGGGAAAATCCAGCGTCTGCGCAGGGGTTCAG TAGTGGCTGCAGGCATTAGACGTATTGAGCAGGCAAGTATTTTATGGCCTGATGGAATAT TCATAACAAAGCATCCAAGTCGACAACGTCCTACACCATCTGCCATTCAATCTGTTGGTT CTCCACAAAACCATCCTCCTACTCCATCTGCCAGTCCATCCATTGGTTCTCCACAAAACC AACCTCCTACTCCATCATCATCACCAATGGCAGAGGATATCCGGAAACTGGATGAGAAGC AACAGAAGGAAGCTGAACAGCGTGCAAACCTAGTATATGAGCTGATGATTGAAAAAGCGC CTGCTGCTGTTGTTGGACTAGTTGGTCACAAGGAATATGAGCAATGCGCAAAGGATCTTT ATTACTTCATCCAGTCATCTGTGTGTCTAAAGCTGTTAGTCCTTGATCTTCTTGAGCTGA TACTACTGTCCGCTTTCCCGGAGCTGGATGGCGTATTCAACACATTGCATCAAGAGAAGA GGAAGTTTGGAGAGCTCAAAATAGATTAGTGTGCGTGAATTTTGAGATAGCTCGTCCATC TTTAGAGAAAATTATATCCAAAAAAAAAAAAATTAAAAAGTTTTTTCTTTAGCCGTGTCC CTCCTGGGAACTGATTTCTGCATAGATTTTTCTTTCCCTTTGGCCCTCCCCGGGAATTGA TTTTTCCCATTCATGTCTTGTACAACTGGCGTGGAAAATTTTGTTTTGCGGGAAAAAATA TTTTACAAACACAAAACTGTTAAAAGTTGAGTTGGAATCATTTTCCTTGAGGAGATGTAA AATTTAGATTTTTTTTGTGGGAAGATTGTAAACTATATTTTGATCAATACCTTGTAAATA TCAGTATAGTGACATACTTACATTCTTCTGCAACATTGTATTTTCTGCCATACAATCAGA GTAATAGTTTATTGCGAAGTTCCCTTGATAGAAAATCAAAGGTATGCGCAACTCAAGCCC ATAGTATGAGATTAAGATATGAGGGTATGAAAGTCGACAATTAGGATAGAAGATAATAGG CAACCTACCCAAACTCTACTACCATGTGAGATTTCATTGGTACGTTGTAGAAAATGAATG GTTTCATGTTTAGTATTTCTAAGTCTTGTCCATTAACACTCATTCATACTCGAAGATTGA TATAAATTCAGCAAGCGTTTGGGCTACATTTGGATTTCAATTGTAAA