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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g120390.3.1
CDS Infomation

Auxin responsive protein IPR003311 AUX_IAA protein
Sequence

ATGGCTAACATGAAAGCCTCCGTCCACCTACCCGAGAGCATATATAGTGGCCTAACCGCA
TTTTTTCAAAGCACCAAAAGATATTTCATTTCACCAAACTATCTAAAAAGGGGGAAAATG
TCATCGGAGACAGCCAAATCAGCGAACGGTTTGACGGAAACAAATAATTCCGGCCTTAAT
TTCAATGAAACTGAGCTAACTCTCGGCTTACCCGGCGAATCGCGGAAGCAAATCTCCGGT
GCAAAACGTGGAAATTCCGACGGTATGGAATTAAGCCTAGGAAGCTCAACTTCCGGTGAA
CGCCGCCGTGATATCTGCGAAGTTAATCACTCGAAAAACGAAATCTCTACCGGAAACAAA
CCTCCAGCAAAGGCACAAGTAATTGGATGGCCGCCGGTGAGATCATACAGAAAAAACGTG
ATAGAAAAGTGCAAATACGTGAAGGTAGCAGTTGACGGAGCTCCTTACTTGAGAAAAGTA
GATCTGGAGATGTACGACAGTTACCAGAAGTTGTTGAATGCTTTAGAAAACATGTTTACT
TGCCTAACAATCTGTAATTCTCAAAGTGAAAGCAAGCTTATGGACCTTACAAATGGTGTA
GAATATGTACCTACTTATGAAGATAAAGATGGAGACTGGATGCTTGTAGGAGATGTTCCA
TGGAAAATGTTTGTTGATACGTGTAAGAGAATTAGATTGATGAAGAGCACGGAGGCTATA
GGATTAGCTCCAAGAACACCTGGGAGATCGTCGAGTTGA

Peptide Sequence

PEP ID

Solyc03g120390.3.1
PEP Infomation

Auxin responsive protein IPR003311 AUX_IAA protein
Sequence

MANMKASVHLPESIYSGLTAFFQSTKRYFISPNYLKRGKMSSETAKSANGLTETNNSGLN
FNETELTLGLPGESRKQISGAKRGNSDGMELSLGSSTSGERRRDICEVNHSKNEISTGNK
PPAKAQVIGWPPVRSYRKNVIEKCKYVKVAVDGAPYLRKVDLEMYDSYQKLLNALENMFT
CLTICNSQSESKLMDLTNGVEYVPTYEDKDGDWMLVGDVPWKMFVDTCKRIRLMKSTEAI
GLAPRTPGRSSS*

Transcript Sequence

Transcript ID

Solyc03g120390.3.1
Transcript Infomation

Auxin responsive protein IPR003311 AUX_IAA protein
Sequence

CATCTGTAGACACGCGTCACGATTAGAATGGCTAACATGAAAGCCTCCGTCCACCTACCC
GAGAGCATATATAGTGGCCTAACCGCATTTTTTCAAAGCACCAAAAGATATTTCATTTCA
CCAAACTATCTAAAAAGGGGGAAAATGTCATCGGAGACAGCCAAATCAGCGAACGGTTTG
ACGGAAACAAATAATTCCGGCCTTAATTTCAATGAAACTGAGCTAACTCTCGGCTTACCC
GGCGAATCGCGGAAGCAAATCTCCGGTGCAAAACGTGGAAATTCCGACGGTATGGAATTA
AGCCTAGGAAGCTCAACTTCCGGTGAACGCCGCCGTGATATCTGCGAAGTTAATCACTCG
AAAAACGAAATCTCTACCGGAAACAAACCTCCAGCAAAGGCACAAGTAATTGGATGGCCG
CCGGTGAGATCATACAGAAAAAACGTGATAGAAAAGTGCAAATACGTGAAGGTAGCAGTT
GACGGAGCTCCTTACTTGAGAAAAGTAGATCTGGAGATGTACGACAGTTACCAGAAGTTG
TTGAATGCTTTAGAAAACATGTTTACTTGCCTAACAATCTGTAATTCTCAAAGTGAAAGC
AAGCTTATGGACCTTACAAATGGTGTAGAATATGTACCTACTTATGAAGATAAAGATGGA
GACTGGATGCTTGTAGGAGATGTTCCATGGAAAATGTTTGTTGATACGTGTAAGAGAATT
AGATTGATGAAGAGCACGGAGGCTATAGGATTAGCTCCAAGAACACCTGGGAGATCGTCG
AGTTGAAGCTAAATAAAGAAGCTTAATAACTGCATGTACAGATACCAACTGGCTTGAGTG
AATAAGTTTTTTTATTTTTACCTTTTGCGTTCTTTAATTATAGGATAAGTAATATATAAT
TAGGCAATTACTTAGAAGTGTATTTTGTGCTACGATGCTTCCCGTGTGAGTGAAGACGAT
TGATTTTATTAATACTGTATTTGTATTTTTATTTGTATGTTTTTGTCGTTACGATTGTAG
ATCTCAATATGAATAAAGCCACTTGGGGAAAAAAAATCAAATCCTTTTGTACGATTTGTG
AAAGGAGGGTGAAAATGATGAAGTTTAATTT