Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc03g120300.3.1
CDS Infomation	CASC3/barentsz eIF4AIII-binding protein (AHRD V3.3 *** A0A072UG99_MEDTR)
Sequence	ATGGCGAGTGTTGGGGAAGCGGAGTACGAGAGTGATCCGGAGGAAGCAAAGTTGTCCTTG AAGATGAGGAGAAGAGAAGCGAGTGATGATGAGGAGGAAGAAAGGGAAGTGGAGAAGAGA GAGAAGTCTGTTCGGATGATTGAATCTGATGGTGAATCGGAAGGACAGGGGGCTGCTGCT GATTATGATGAAGAGGAGGAAGAAGAGGAATACGATGATGAAGAGTATGTGGAGGACGAG GAAGACTATGAGGGGGATGAGTACCAGGAAGTAGGTGGAACTAGTGGCGAAGGTCACGAG GAAACTGTTAAGAAGGTTGAAGCAGTAACGGAGGGTGCTGAGGGAGTGAAGCAAGTTGTG GGAGAAGGAACAGGGTCGGGTCAAGGGATTGATGATGACAATGAGAATAATGTGCAGGGG GAGGAGGGCAAGAAAGAGAATGAACCTTTTGCGGTGCCCACTGCTGGAGCATTCTACATG CACGATGACAGGTTTCGAGACAATGCTGGTGGGCGACACAGGCGAACTTTTGGTGGAAGG AAGTTATGGGAATCCAGAGATGAGAGGAAATGGGGACATGACAAGTTTGAAGAGTTGACT GTGGAGGAGAGGCATTACGATGAGGGTAGGAGGGGATCTAGGGGTCGTTATCGAGGTAGA GGCAGAGGGCGAGGGCCTGGGCCTGAGCGTGGAACTGTGCGAGGACAAAGAGCGAAAGCA TATGTCAACGACAGCTATCCGAGCAACAACAACATCCAGAAGATTCAGGATAATGCGCCA AAAGGTATGAGAGGTCGGGGTCCAAGAAGGTATCGACCCACATTTAAGGACAATATTGAT GCACCCCCTCTACCAAACAAACAATCTGGTTCGTCAGTTGAGAAACGTTCATATCATAGC ACAGCCAAAGCATCTGCTCCTGTATCAAATGTAGAGAATGATGCAGCGACAGCTGCAAAG CAAGGTTTTGTGTCAAGCTTGAATTCTGCTTCTCCTCCGTTTTACCCCTCTAGTTCCTCC ACTAAAGAGATCAATGTGACTCACAAGAAGGAACTGCAAACTGGGACAAGTAGCCGCAGT GCTCATCCTTCTGTTTTAGGAGATAATTCTGCTGCGTCACAATCAAATTCAGTGTTACGA GGGAAGAATGGCAGCGATTCTGTTAGTATTGACAAACTTCATATTTCTGATCCTATTACT GCTGTAGCTTCAAAGATTTCACCCGGCTTGCAGTTGGCTCCTGGTTCCTCGACAATAAGT CCTACTCAGTCACAACCATTGAGAGGCCAAGGAAGAGGATTTAATGCAATGCCAAATGTG AATTACCAATCTCCTGTGATAAACAACCAATTCAACAGAGCTCCTCAGCCGACAAATCTC AATTCGACTCAGAGGAATCCTGTTCTAGGTCGAGGGCAACCTACTTTCCAAGCTACTGGT CAACAGTTTGCTCAGCGATCTGGTACTAGATCTCAAGGTTCATCTCCACCCAAAGCTGGA CAATCTATCTCTGAAACTGGGGAGTTTGAATCTTCTTCAGATTCAAGTAAATCAAAGAGT GCTATGGTTGCAAAAGGAAAAGGCACTCTTCAGAGCACTGGAAGGGGATCAGTTCTCTAT GGCGGAGCTCAGGTTATGGGTGCACCTGGAAGCATGGGTGGTGGTGATCAGAACTTCCCT ACAACACCAGCCTTTTTGCCAGTCATGCAATTTGGCGGCCAGCACCGTGGTGGCATTCCT GCTGTTGGCATGGCTTTTCCTGGATATGTTGGTCAGCCACAACTTGGTTTAGGGAATTCT GAGATGACATGGTTGCCAGTTTTAGCTGGAGCTGCTGGAGCATTAGGTGCAACATACTGT TCGCCATATATTGCTATGGATGGTGCCTATCATGCTCGTCCATCTGGGCAAATATCTTCT CTCACTGCTGCTCCAAGCAAAGAGAACAGTGCCAGTAAGCCAAATAATGAAAGCAATCCC CAACAGCGACTAGAGCTCTCAAATGATGACTTAGGCCAGCGCCAGAAGAATCCTCGCAGA TATACGGAGATGAAGTTCGATCAGTGA

Peptide Sequence

PEP ID	Solyc03g120300.3.1
PEP Infomation	CASC3/barentsz eIF4AIII-binding protein (AHRD V3.3 *** A0A072UG99_MEDTR)
Sequence	MASVGEAEYESDPEEAKLSLKMRRREASDDEEEEREVEKREKSVRMIESDGESEGQGAAA DYDEEEEEEEYDDEEYVEDEEDYEGDEYQEVGGTSGEGHEETVKKVEAVTEGAEGVKQVV GEGTGSGQGIDDDNENNVQGEEGKKENEPFAVPTAGAFYMHDDRFRDNAGGRHRRTFGGR KLWESRDERKWGHDKFEELTVEERHYDEGRRGSRGRYRGRGRGRGPGPERGTVRGQRAKA YVNDSYPSNNNIQKIQDNAPKGMRGRGPRRYRPTFKDNIDAPPLPNKQSGSSVEKRSYHS TAKASAPVSNVENDAATAAKQGFVSSLNSASPPFYPSSSSTKEINVTHKKELQTGTSSRS AHPSVLGDNSAASQSNSVLRGKNGSDSVSIDKLHISDPITAVASKISPGLQLAPGSSTIS PTQSQPLRGQGRGFNAMPNVNYQSPVINNQFNRAPQPTNLNSTQRNPVLGRGQPTFQATG QQFAQRSGTRSQGSSPPKAGQSISETGEFESSSDSSKSKSAMVAKGKGTLQSTGRGSVLY GGAQVMGAPGSMGGGDQNFPTTPAFLPVMQFGGQHRGGIPAVGMAFPGYVGQPQLGLGNS EMTWLPVLAGAAGALGATYCSPYIAMDGAYHARPSGQISSLTAAPSKENSASKPNNESNP QQRLELSNDDLGQRQKNPRRYTEMKFDQ*

Transcript Sequence

Transcript ID	Solyc03g120300.3.1
Transcript Infomation	CASC3/barentsz eIF4AIII-binding protein (AHRD V3.3 *** A0A072UG99_MEDTR)
Sequence	CCGATTTGAGAAAAAGACGTTTAAAAATATCCACAAAATTAATCGCCTGGGGTTGGTGAT AGAACAACTAATTCACCATCTAAAATTCTAGGGTTTTCAATTCCCCTTACCAAAATTCAG ATCAAATCTCAAAAACCTCTACTGGTTGATAAATTATCGATTTTTTTTTTGCTAATTGCT TGAAAAAGTTTCGTTCTGTTCTGTTTTTTCGTGTGAATTATAGCGAGATTTTGGTTTGCG TGATGGCGAGTGTTGGGGAAGCGGAGTACGAGAGTGATCCGGAGGAAGCAAAGTTGTCCT TGAAGATGAGGAGAAGAGAAGCGAGTGATGATGAGGAGGAAGAAAGGGAAGTGGAGAAGA GAGAGAAGTCTGTTCGGATGATTGAATCTGATGGTGAATCGGAAGGACAGGGGGCTGCTG CTGATTATGATGAAGAGGAGGAAGAAGAGGAATACGATGATGAAGAGTATGTGGAGGACG AGGAAGACTATGAGGGGGATGAGTACCAGGAAGTAGGTGGAACTAGTGGCGAAGGTCACG AGGAAACTGTTAAGAAGGTTGAAGCAGTAACGGAGGGTGCTGAGGGAGTGAAGCAAGTTG TGGGAGAAGGAACAGGGTCGGGTCAAGGGATTGATGATGACAATGAGAATAATGTGCAGG GGGAGGAGGGCAAGAAAGAGAATGAACCTTTTGCGGTGCCCACTGCTGGAGCATTCTACA TGCACGATGACAGGTTTCGAGACAATGCTGGTGGGCGACACAGGCGAACTTTTGGTGGAA GGAAGTTATGGGAATCCAGAGATGAGAGGAAATGGGGACATGACAAGTTTGAAGAGTTGA CTGTGGAGGAGAGGCATTACGATGAGGGTAGGAGGGGATCTAGGGGTCGTTATCGAGGTA GAGGCAGAGGGCGAGGGCCTGGGCCTGAGCGTGGAACTGTGCGAGGACAAAGAGCGAAAG CATATGTCAACGACAGCTATCCGAGCAACAACAACATCCAGAAGATTCAGGATAATGCGC CAAAAGGTATGAGAGGTCGGGGTCCAAGAAGGTATCGACCCACATTTAAGGACAATATTG ATGCACCCCCTCTACCAAACAAACAATCTGGTTCGTCAGTTGAGAAACGTTCATATCATA GCACAGCCAAAGCATCTGCTCCTGTATCAAATGTAGAGAATGATGCAGCGACAGCTGCAA AGCAAGGTTTTGTGTCAAGCTTGAATTCTGCTTCTCCTCCGTTTTACCCCTCTAGTTCCT CCACTAAAGAGATCAATGTGACTCACAAGAAGGAACTGCAAACTGGGACAAGTAGCCGCA GTGCTCATCCTTCTGTTTTAGGAGATAATTCTGCTGCGTCACAATCAAATTCAGTGTTAC GAGGGAAGAATGGCAGCGATTCTGTTAGTATTGACAAACTTCATATTTCTGATCCTATTA CTGCTGTAGCTTCAAAGATTTCACCCGGCTTGCAGTTGGCTCCTGGTTCCTCGACAATAA GTCCTACTCAGTCACAACCATTGAGAGGCCAAGGAAGAGGATTTAATGCAATGCCAAATG TGAATTACCAATCTCCTGTGATAAACAACCAATTCAACAGAGCTCCTCAGCCGACAAATC TCAATTCGACTCAGAGGAATCCTGTTCTAGGTCGAGGGCAACCTACTTTCCAAGCTACTG GTCAACAGTTTGCTCAGCGATCTGGTACTAGATCTCAAGGTTCATCTCCACCCAAAGCTG GACAATCTATCTCTGAAACTGGGGAGTTTGAATCTTCTTCAGATTCAAGTAAATCAAAGA GTGCTATGGTTGCAAAAGGAAAAGGCACTCTTCAGAGCACTGGAAGGGGATCAGTTCTCT ATGGCGGAGCTCAGGTTATGGGTGCACCTGGAAGCATGGGTGGTGGTGATCAGAACTTCC CTACAACACCAGCCTTTTTGCCAGTCATGCAATTTGGCGGCCAGCACCGTGGTGGCATTC CTGCTGTTGGCATGGCTTTTCCTGGATATGTTGGTCAGCCACAACTTGGTTTAGGGAATT CTGAGATGACATGGTTGCCAGTTTTAGCTGGAGCTGCTGGAGCATTAGGTGCAACATACT GTTCGCCATATATTGCTATGGATGGTGCCTATCATGCTCGTCCATCTGGGCAAATATCTT CTCTCACTGCTGCTCCAAGCAAAGAGAACAGTGCCAGTAAGCCAAATAATGAAAGCAATC CCCAACAGCGACTAGAGCTCTCAAATGATGACTTAGGCCAGCGCCAGAAGAATCCTCGCA GATATACGGAGATGAAGTTCGATCAGTGAGCTTGTTTGTAGGTTGGAGCTGTTTGAATAA GCAGATTAAGGCCCTCTCCTAGACCCTATGTTCTCCAAGTGTTGCTCTGGAGTATCTAGG GTTCTCATGTGTTGTGATGTATTTTAGGTTTACATGACAAACGCCTGCTCATGCTGCTTC ACTTTCGGGGATACACTGCAGCTTGACGGGTGGCAGTTATTTGTTTAAATATATGGTTCT TGTGGCTTGGGGTTTTTGTAACTGAAGGAAGTAAAAGATGTTGATAGAGTTTCTTCAAAT GGTGATGGAAAATAATGGTAACAGTCCGGAAGCAGTTGCATCTGTTTTCTTATTATGTGA AGTTTTTTGTCTTCTGAGTAGATGGCTCTAGTGTCTTTTAAAGTTTTTCTGTTGAGCCAC TACTGTTTGGTCGATATTTTCTGGGCTTTGTAGTTAAATATTATGTTAACAAGAGAGCGT GTCTTGCTCAGACATTGAATAATAAATTTTTGTTTTAAAGAGACTTTGGTTTGTCCAGAT TTTTCATCTCTCTGTCATTTCACTGGCACCAATCAAGCAGTTTTATGTTTTATATGTGCT TGTCATGACATATGACCTGATCGTTTGTTGTATAATAATTGTGGCCTTGTTGTGGAAAAC TGAGACTACTGGGTAAATTGTGTAACGGCATGAGTGAGCATTACGCAATACGCATCTTCT GCTACTTGTTTATTACTTGCTATATTTTCCTGCAATAAATGACATTGATGATGGATGAGT CAGTTGTTTATTTTCAAAGTGGAAATAGATTCTCTCTTGGCTGTTCATACAGCACATCCA CCTTAAATGATCACAATTCACAAAGCTCGAGCATTTAAATAATGCCACTCACTTGAAAGT TAAATCTGTCAATTAGTTAGGTAGGTAGATGCATAATTGTTATTTATTACAAATATTTTC CTAATAAATTCCTCACACTCTTATCAAATATTAGCCATTTTACAAATACTTGGAATGAAA AATTACGTTTAGTTATGCGACAAATTATGCTGGGATACAGGAAACCTGAATTGAAATGTA AGATTGAAATTCATCTAATAATGCTAGAATTTTCTCTTGCAATCAAACTTGTTTAAATCA TATGTATCCCCTAGTATACTTTTATTTCACGTTCTATCACATTGGTTGAATCTGTAACGA ATAGTGTGTCTGTAAAGTGTACGATAAATCTGTGATTAAATTCACAATCTTATTATTATT CATAATATATCTAGCGCGATAAATCTGTGATTAAATTCACCTCTTATTATTATTCATAAT ATAATATATAGGCTTACCTATAAGCTACGACTTATGCATAGTATATTTATAACATCTTTT TATAATAATGCCAAATTCCTATGTGAAAATTATTTCTTTCAAATCTCAATGCCACATTAC GTCACCATACGTAGGCTAAGAAGCGTTATTTTTCAACTTGTGTCTAAATAAAAAAAACGA AAATCAC