Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g120280.1.1
CDS Infomation

Ran-binding protein 1 domain-containing (AHRD V3.3 *** B9GEK5_POPTR)
Sequence

ATGGGAGATGCCGAGAACTCTCTTCAACCATCAAAGAAAAGGGCAGCTATAAAGGAATTA
TCACGAGACAATCCTGGTCTCGATGATGATGAAAATGAAGCTGAGCTAGAGACTGGGTCT
TTCAAGAAAGCAAGTGAGGAGGTGATGGCAAGTAGAAGAATTGTCAAAGTTCGTCGCAGT
CAAACTACTTCATCTACAGCTACACCTTCAGCTAACCCCTTTGCAGCAATCCGCTTGGTT
CCACCCACTGAGTCCAGTATCCCGTCTACTGTGATAACAAGTGAAGTTGAGAGTGGGATA
ACAAGTTCAGGTAAACCAGAAGATAAAAATGACATTGGTGAGGCAACTAGAAAGGAGACA
AATGATGTGTGTAAGGAAGAGTTGAAGGAATCTGATCAAATTTCTAAGCCATCAGAAGGT
AATGTTGATGAATCCAATGTTGTCAAGGAGAAAGTTGAAACTCCTAATGAGGCTGACAAA
CCTGAATCTGCTGAAGAGAAGGTAGCAGATGATGAGAAAGTCCAGGCTGAAACCAAGGAA
GGCACAGTAGTTGAGAAGAGCGAAAATGACAGTAAGAAGGATGTGGAAGTCGAGAAAACA
AAGAATGAAGAACAAAATGATGCTGGTGGTGAGAAAAGTGAGAAGGGTGCAGAAACTGCT
TCTTTTAGCTCATTCCAACAACTCTCAAGTGGCCAAAATGCTTTCACAGGATTTTCAGGG
ACTGGGTTCTCCAGCACTACTTTCTCCTTTGGAGGTATTTCAAAAGAGGGATCTTCTCTA
GGTTTTGGTTCTGAATCAGGTGCTGGTTCTCTCTTTGGAGCAAAAAGTGACCAGTCACCA
TTTGGACTTAATCTTCCTACTAATGGAAGTACTTCTCTGTTTGGAAACTCGGGGTCATCC
CTTGTGAATAAGAGTGAGGGTACTGGATTTCCTTCCAAAGAAGAGGTCACTGTTGAAACA
GGGGAGGAAAATGAAAAACCCGTATTCGCAGCTGATTCCGTGCTGTTTGAATATCTTAAT
GGAGGGTGGAAAGAGCGGGGGAAGGGAGAACTAAAGGTCAATGTTTCTACAACAGGGGAA
GGAAAAGGTAGACTTGTTATGAGGACCAAAGGAAATTACAGATTGATCTTGAATGCCAGC
CTTTTTCCAGAAATGAAGCTTGCTAATATGGACAAAAGAGGGGTCACTTTCGCTTGCTTG
AATAGTGCTGCTGACGGAAAAGGACTTTCTACTATTGCTCTGAAGTTCAAGGATGCCTCC
ATCGTGGAAGATTTTCGTGCTGCTGTAGTGGAACATAAAGGTACTACAACTGGTTCTTTG
AAGACACCAGAAAACTCTCCTAAAGCTTAA

Peptide Sequence

PEP ID

Solyc03g120280.1.1
PEP Infomation

Ran-binding protein 1 domain-containing (AHRD V3.3 *** B9GEK5_POPTR)
Sequence

MGDAENSLQPSKKRAAIKELSRDNPGLDDDENEAELETGSFKKASEEVMASRRIVKVRRS
QTTSSTATPSANPFAAIRLVPPTESSIPSTVITSEVESGITSSGKPEDKNDIGEATRKET
NDVCKEELKESDQISKPSEGNVDESNVVKEKVETPNEADKPESAEEKVADDEKVQAETKE
GTVVEKSENDSKKDVEVEKTKNEEQNDAGGEKSEKGAETASFSSFQQLSSGQNAFTGFSG
TGFSSTTFSFGGISKEGSSLGFGSESGAGSLFGAKSDQSPFGLNLPTNGSTSLFGNSGSS
LVNKSEGTGFPSKEEVTVETGEENEKPVFAADSVLFEYLNGGWKERGKGELKVNVSTTGE
GKGRLVMRTKGNYRLILNASLFPEMKLANMDKRGVTFACLNSAADGKGLSTIALKFKDAS
IVEDFRAAVVEHKGTTTGSLKTPENSPKA*

Transcript Sequence

Transcript ID

Solyc03g120280.1.1
Transcript Infomation

Ran-binding protein 1 domain-containing (AHRD V3.3 *** B9GEK5_POPTR)
Sequence

ATGGGAGATGCCGAGAACTCTCTTCAACCATCAAAGAAAAGGGCAGCTATAAAGGAATTA
TCACGAGACAATCCTGGTCTCGATGATGATGAAAATGAAGCTGAGCTAGAGACTGGGTCT
TTCAAGAAAGCAAGTGAGGAGGTGATGGCAAGTAGAAGAATTGTCAAAGTTCGTCGCAGT
CAAACTACTTCATCTACAGCTACACCTTCAGCTAACCCCTTTGCAGCAATCCGCTTGGTT
CCACCCACTGAGTCCAGTATCCCGTCTACTGTGATAACAAGTGAAGTTGAGAGTGGGATA
ACAAGTTCAGGTAAACCAGAAGATAAAAATGACATTGGTGAGGCAACTAGAAAGGAGACA
AATGATGTGTGTAAGGAAGAGTTGAAGGAATCTGATCAAATTTCTAAGCCATCAGAAGGT
AATGTTGATGAATCCAATGTTGTCAAGGAGAAAGTTGAAACTCCTAATGAGGCTGACAAA
CCTGAATCTGCTGAAGAGAAGGTAGCAGATGATGAGAAAGTCCAGGCTGAAACCAAGGAA
GGCACAGTAGTTGAGAAGAGCGAAAATGACAGTAAGAAGGATGTGGAAGTCGAGAAAACA
AAGAATGAAGAACAAAATGATGCTGGTGGTGAGAAAAGTGAGAAGGGTGCAGAAACTGCT
TCTTTTAGCTCATTCCAACAACTCTCAAGTGGCCAAAATGCTTTCACAGGATTTTCAGGG
ACTGGGTTCTCCAGCACTACTTTCTCCTTTGGAGGTATTTCAAAAGAGGGATCTTCTCTA
GGTTTTGGTTCTGAATCAGGTGCTGGTTCTCTCTTTGGAGCAAAAAGTGACCAGTCACCA
TTTGGACTTAATCTTCCTACTAATGGAAGTACTTCTCTGTTTGGAAACTCGGGGTCATCC
CTTGTGAATAAGAGTGAGGGTACTGGATTTCCTTCCAAAGAAGAGGTCACTGTTGAAACA
GGGGAGGAAAATGAAAAACCCGTATTCGCAGCTGATTCCGTGCTGTTTGAATATCTTAAT
GGAGGGTGGAAAGAGCGGGGGAAGGGAGAACTAAAGGTCAATGTTTCTACAACAGGGGAA
GGAAAAGGTAGACTTGTTATGAGGACCAAAGGAAATTACAGATTGATCTTGAATGCCAGC
CTTTTTCCAGAAATGAAGCTTGCTAATATGGACAAAAGAGGGGTCACTTTCGCTTGCTTG
AATAGTGCTGCTGACGGAAAAGGACTTTCTACTATTGCTCTGAAGTTCAAGGATGCCTCC
ATCGTGGAAGATTTTCGTGCTGCTGTAGTGGAACATAAAGGTACTACAACTGGTTCTTTG
AAGACACCAGAAAACTCTCCTAAAGCTTAA