Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g120060.2.1
CDS Infomation

castasterone 26-hydroxylase
Sequence

ATGGAAGGATTTTGCTTTCAATGGTTATGTGTTATTCTATTTTTGTATGTGTTACTGTTG
TGTATACAGAAAGCATTTGTTCATCTTTGGTGGACACCAAAAATAATTCAAAAACACTTC
AAGAAGCAAGGTATCACAGGTCCTAAATACCATTTTCTCTTTGGTAACCTCAAAGAAATT
GCAAGTTTCACTACTCCATCTTGGCCTTCCACTTTTACCTCTCATGACATTCTTCCCAAT
GTTCTCCCCTTCTACCATCATTGGAAGAAAATCTATGGTTCAATATTTGTTATATGGTTT
GGACCAACGGCTCGTGTCACCATTTCTGATCCAGCTTTAATTAGGGATATATTCGTCCTG
AAATCAGATAATTTTGAGAAAAATGAGTCACCAGCCCTTGTCAAGAAGCTTGAAGGTGAT
GGTTTGCTTAGTCTCAAAGGTGAAAAATGGGCTCACCATAGGAAGATTATTACTCCTACA
TTCTACATAGAAAATCTCAGGCTAATGATTCCCATGATGGGAAAGAGCATGAAGGAGATG
TTAGACAAATGGTCAAAAATGTCAAACGCCAGCGGAAAAGTAGAGATTGAAGTATCAGAA
ATGTTCTCAACATTAGCAGAAGATGTCATTACGCGTATTGTGTTTGGAAACAGCTACGAA
GATGGTAAAGCCATCTTTGAGTTACAAGCACAACAAATGATTTATGCCACCGAAGCTTAT
CAAAAAGTATTCATCCCTGGATACAGGTTTTTGCCTAGTAAAAAGAATAGAATATGTTGG
AGATTGGATAAACAAGTGCGTAAATCTCTGATGAAACTGATTGAAGAAAGAAGAAAAAAA
GAAGAGGTTTTGTCAGAAGAATGTCCGAATGATTTATTGGAAGTGATGATCAAAGCAGGT
AGTGATGATGAATATAGAAATACTATCACAGTTAATGACATTGTCGAAGAATGCAAGACC
ATTTTCTTTGCCGGCAAACATACCACGTCTAATTTGCTGACGTGGACCACCATTTTACTA
GCCATGCATCCTAAGTGGCAGGAATTAGCACGTGATGAAGTTTTAACTGTCTGTGGAGCA
CGTGATCCTCCATCTAAACAACAAATTTCAAAGCTTAAGACGCTAGGAATGATAATTAAC
GAATCTGTGCGGCTATATCCACCAGCAGTGGCAGCAATTAGACGAGCAAAAGTTGATACA
CAACTAGGGGATTTCACATTACCTAGAGGGACTGAACTCCTTATACCAATTATAGCAATC
CATCACGATCAAACACTATGGGGACAAGATGCTAACGAATTTAATCCAGCAAGATTTGGT
CTAGGAGTAGCACAAGCAGCAAAACACCCCATGGCGTTCATGCCTTTTGGCCTCGGCGCG
CGGCGATGCGTCGGCCAAAATTTAGCAGTGTTACAAGCTAAATTAGCAATAGCTATGATC
TTGCAGCGGTTTTCTTTTGATCTTTCTCCAAATTACCGACATGCTCCTACTATTTTGATG
CTCTTATGTCCACAATATGGTGCTCCTATTATATTCCAAAAGTTGTAG

Peptide Sequence

PEP ID

Solyc03g120060.2.1
PEP Infomation

castasterone 26-hydroxylase
Sequence

MEGFCFQWLCVILFLYVLLLCIQKAFVHLWWTPKIIQKHFKKQGITGPKYHFLFGNLKEI
ASFTTPSWPSTFTSHDILPNVLPFYHHWKKIYGSIFVIWFGPTARVTISDPALIRDIFVL
KSDNFEKNESPALVKKLEGDGLLSLKGEKWAHHRKIITPTFYIENLRLMIPMMGKSMKEM
LDKWSKMSNASGKVEIEVSEMFSTLAEDVITRIVFGNSYEDGKAIFELQAQQMIYATEAY
QKVFIPGYRFLPSKKNRICWRLDKQVRKSLMKLIEERRKKEEVLSEECPNDLLEVMIKAG
SDDEYRNTITVNDIVEECKTIFFAGKHTTSNLLTWTTILLAMHPKWQELARDEVLTVCGA
RDPPSKQQISKLKTLGMIINESVRLYPPAVAAIRRAKVDTQLGDFTLPRGTELLIPIIAI
HHDQTLWGQDANEFNPARFGLGVAQAAKHPMAFMPFGLGARRCVGQNLAVLQAKLAIAMI
LQRFSFDLSPNYRHAPTILMLLCPQYGAPIIFQKL*

Transcript Sequence

Transcript ID

Solyc03g120060.2.1
Transcript Infomation

castasterone 26-hydroxylase
Sequence

ATGGAAGGATTTTGCTTTCAATGGTTATGTGTTATTCTATTTTTGTATGTGTTACTGTTG
TGTATACAGAAAGCATTTGTTCATCTTTGGTGGACACCAAAAATAATTCAAAAACACTTC
AAGAAGCAAGGTATCACAGGTCCTAAATACCATTTTCTCTTTGGTAACCTCAAAGAAATT
GCAAGTTTCACTACTCCATCTTGGCCTTCCACTTTTACCTCTCATGACATTCTTCCCAAT
GTTCTCCCCTTCTACCATCATTGGAAGAAAATCTATGGTTCAATATTTGTTATATGGTTT
GGACCAACGGCTCGTGTCACCATTTCTGATCCAGCTTTAATTAGGGATATATTCGTCCTG
AAATCAGATAATTTTGAGAAAAATGAGTCACCAGCCCTTGTCAAGAAGCTTGAAGGTGAT
GGTTTGCTTAGTCTCAAAGGTGAAAAATGGGCTCACCATAGGAAGATTATTACTCCTACA
TTCTACATAGAAAATCTCAGGCTAATGATTCCCATGATGGGAAAGAGCATGAAGGAGATG
TTAGACAAATGGTCAAAAATGTCAAACGCCAGCGGAAAAGTAGAGATTGAAGTATCAGAA
ATGTTCTCAACATTAGCAGAAGATGTCATTACGCGTATTGTGTTTGGAAACAGCTACGAA
GATGGTAAAGCCATCTTTGAGTTACAAGCACAACAAATGATTTATGCCACCGAAGCTTAT
CAAAAAGTATTCATCCCTGGATACAGGTTTTTGCCTAGTAAAAAGAATAGAATATGTTGG
AGATTGGATAAACAAGTGCGTAAATCTCTGATGAAACTGATTGAAGAAAGAAGAAAAAAA
GAAGAGGTTTTGTCAGAAGAATGTCCGAATGATTTATTGGAAGTGATGATCAAAGCAGGT
AGTGATGATGAATATAGAAATACTATCACAGTTAATGACATTGTCGAAGAATGCAAGACC
ATTTTCTTTGCCGGCAAACATACCACGTCTAATTTGCTGACGTGGACCACCATTTTACTA
GCCATGCATCCTAAGTGGCAGGAATTAGCACGTGATGAAGTTTTAACTGTCTGTGGAGCA
CGTGATCCTCCATCTAAACAACAAATTTCAAAGCTTAAGACGCTAGGAATGATAATTAAC
GAATCTGTGCGGCTATATCCACCAGCAGTGGCAGCAATTAGACGAGCAAAAGTTGATACA
CAACTAGGGGATTTCACATTACCTAGAGGGACTGAACTCCTTATACCAATTATAGCAATC
CATCACGATCAAACACTATGGGGACAAGATGCTAACGAATTTAATCCAGCAAGATTTGGT
CTAGGAGTAGCACAAGCAGCAAAACACCCCATGGCGTTCATGCCTTTTGGCCTCGGCGCG
CGGCGATGCGTCGGCCAAAATTTAGCAGTGTTACAAGCTAAATTAGCAATAGCTATGATC
TTGCAGCGGTTTTCTTTTGATCTTTCTCCAAATTACCGACATGCTCCTACTATTTTGATG
CTCTTATGTCCACAATATGGTGCTCCTATTATATTCCAAAAGTTGTAGAGATAGACATGC
ATCCTTATATATATAATATATATCATAGTATGTGCATGCTTGTACAAAACAAAATTTTCC
AGATCAAAAATGTTTTGTGTCTACAA