Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc03g119920.1.1
CDS Infomation	LOW QUALITY:Cytochrome b559 subunit alpha (AHRD V3.3 --* PSBE_ADICA)
Sequence	ATGTCTTTTTTTGCTTCTTATTGGACAATGGCTAGTATTATTATCTGGTTGATGTTGTTG TCTGTTGGTTTTGTTCATTCTTATGTGGTAGATGGAGAGTTAGGACCTAGGACTAGAACT TCTATGCCTTACAAATATGAAAGAACTGATGAAGTCAAAAAAGAATGTGCTTTTGTTTTA GCTTCTGCTTCTGAATTGGAACCTGATGATAACAGAATTTATAGCATAAAACATGAATTA AGTTTTCTGAATGGAGATTGGAGGCAAGTGTCTAATGGGGCTGCTTCAATAATGCCTTTT GATGATAGAGATCTTTCAAACAGATCATCGGATCTTCGATCTCCGTTGAACTTAGTTTCT TTTTGGGTTACGAATGTTGATCGTGCTCATCAGTCTAAGAAATCAGTGAGTGTGAGTGGG ATATTGCAGATTGGTATCACCCTAGATGGCTTGTTTTCAAGTAAACCATATGAGAGAAGT CCTCATTTTGATATTTGGCCCGGTCATTCCCAGCTTTCGGTGACTTTTGAAGGAGTATAC ATTGAATCGAAGAAAAATCAAGGGGAAAGAGTCATGTGTTTGTTGGGGACAACAATGTTG CCTTCTCGTCAGCAAGAGTCTACTGATCCATGGCAGTGGGTAAAGGAATCTGGTTATACT AATCAGCCACCTCTTATGCAAGATGATCAAATTTTGCTCGTGCTTCATTATCCTAGAACA AATACACTGACAAATAGAGCTGTTCTAGGAACCATGAAAAGCTTAAACCCAAAGACGAGT TTTAAGTACTTTGATGAAGTTCATATGTCTTCTTGGCTGGGAACTTCTTCAAAGTACGAA TTCGGCTCTGAAAAGTTTGTGTCAAAAGCTTGTGATCCATATCCGTACAAAGATAGTCTG AGTACTGAGATAAATACTTATCGAGGGCTTGACTTCTGTTATATTCTTCAAAGATTCACT CAGCAAGAAGCCTTAACAGTTGTGCCAAACTGGAAATGCAACGGTACAGATGATTTTTGC AGTCAATTGGGTCCATTCAGATCGGACAAGGAGATAAATGCCACTGATGGGGGTTTTAAG GACGTCAAGCTTGTCCTTCAGGATGTTCGATGTGATACAATATCTGTAAAAGATAATGTC ACTTCTTCTAGGGTCTCTTCTGTGTTTAGAGTGATTTCTCCATTGGAGAATCAGTTCACC GCAGCACAAAGGACTGGGCTTAGTAACATGACTCTTTCTGCTGAGGGAATTTGGAAATCT TCCAGTGGACAGCTTTGTATGGTTGGTTGCCGAGGAGTAGTTGGTGCAGAAGACAGCAAC TGTGATTCGCGAATCTGCTTGTATGTTCCACTCTCCTTTTCTATAACACAAAGGAGCATA ATTATTGGCCATTTTTCCAGTATTGATGGAAGCAGTAGGCGTTACTTTCCTTTATCATTT GAGAAACTGATCCGCCCTGTTGAGCTGTGGGATCAATATACTGCTTCTCGTCCATACTAC AAATACTCAAAAATCAATGCAGCTGCTACAGTCCTTGAGAAAAATGAGCCCTTTACCCTT GGTTCAATGTTTAAGAAATCACTGTTGACATTCCCAAGACTGGAGGATGCAGATTCTTTT TCCGTCAGCCTTTCGATTCTTTCTGAAGATCTCTCCCTACACACCTCAGCAGTTGCAGAT CAAATCTCTGGTTCAGCTAACCAAAGAGTTGAAATTGAAATGGAGATTCTTTCTCTTGGT CAAATGTTTGGGCCTTTGACAAACGGTTCCATCGGTGAAAAAGAGAATTCTTATCATGCT AAGGCTGAATACACAGAAAAACAGCTTCTCTTAAATGTTTCTGCTCAACTTAGTCTCACT GGGACGTCATACAGTAACATCTCGTTGCTTTTTGTTGAGGGAATGTATGATCCACATGTC GGAAATATGTACCTCATTGGTTGCAGGGATGTTCGAGCCTCTTGGAAAATTCTATCAGAA AGTATGGACCTTGAGGCTGGATTGGATTGTCTGATTGAGGTGGTTATAACATACCCACCA ACCACTGCTCGTTGGTTGGTCAATCCAACAGCTAAAATCTCCGTATCCTCTCAAAGAAAT GATGATGATCCACTCTACTTTAATCCCGTAAACATTAAAACATTCCCCATTATGTACAGG AAGCAGCGAGAAGACATTCTTTCCCGTAGGGGCGTAGAGGGCATCCTGCGCATCTTGACA CTCTCTCTGGCAATATTTTGCATTCTCAGCCAACTATTTTACATCAGAGGTAATGCGGAA TCGGTCCCGTATGTCTCGCTTGCCATGCTAGGTGTCCAAGCTGTTGGATACGGCCTACCT TTGATCACAGGTGCAGAAGCTTTGTTCAAAATGATGGGTGCTGAAATCAATGAGACTCCA TCTTATGATCTTGAAAACAGCCAGTGGATTCGTCTGATTGATTATACTGTCAAGGTTCTT GTGCTAGTTGCCTTTTTAGTAACAGCGAGGCTCAGCCAAAAGGTGTGGAGATCCCGTATC AGATTATCAGCAAGGAGCCCTCTTGAACCACACCGTGTTCCAAGTGACAAATGGGTACTT GTCAGTACAGTGGTAATGCATGTTGCTGGATATATCATTGTTCTGTTTATCCACTCCTTC AATACAAGCCAGAAACCTCTTCATGCTGAACGTTACGTAGATTCCACTGGAAATTTTCAC ACCTTGAGGGAATGGGAAACTGAATTGGAGGAGTACATGGGTTTGATTCAAGATTTCTTT TTGCTTCCTCAAGTAATAGGAAACCTTTTTTGGCAAATCCATTGCAAACCACTGAGGAAG CTATATTATATTGGACTTACGTCGGTTAGACTTCTGCCTCATGTGTATGATTACATCAGA TCTCCTGTTCCCAATCCCTATTTCTCGGAAGAGTACGAGTTTGTGAACCCCAGGTTTGAT TTTTACACAAAGTTTGGAGACATTGCCATACCAGTGGCTGCAGTTGTACTGGCAGTTGTT GTGTATATTCAGCAGAGGTGGAACTATGAGAAGCTTAGCCAGACACTTAGATTGGGCAAG ATTAAGCTTCTACCAGTTGGGTCCCGAGTTTATGAGAGGTTACCTTCTGCTGAAGCTGAA CTTACCTCCGGTGTCAAAGACCGGGATGTGGACTGA

Peptide Sequence

PEP ID	Solyc03g119920.1.1
PEP Infomation	LOW QUALITY:Cytochrome b559 subunit alpha (AHRD V3.3 --* PSBE_ADICA)
Sequence	MSFFASYWTMASIIIWLMLLSVGFVHSYVVDGELGPRTRTSMPYKYERTDEVKKECAFVL ASASELEPDDNRIYSIKHELSFLNGDWRQVSNGAASIMPFDDRDLSNRSSDLRSPLNLVS FWVTNVDRAHQSKKSVSVSGILQIGITLDGLFSSKPYERSPHFDIWPGHSQLSVTFEGVY IESKKNQGERVMCLLGTTMLPSRQQESTDPWQWVKESGYTNQPPLMQDDQILLVLHYPRT NTLTNRAVLGTMKSLNPKTSFKYFDEVHMSSWLGTSSKYEFGSEKFVSKACDPYPYKDSL STEINTYRGLDFCYILQRFTQQEALTVVPNWKCNGTDDFCSQLGPFRSDKEINATDGGFK DVKLVLQDVRCDTISVKDNVTSSRVSSVFRVISPLENQFTAAQRTGLSNMTLSAEGIWKS SSGQLCMVGCRGVVGAEDSNCDSRICLYVPLSFSITQRSIIIGHFSSIDGSSRRYFPLSF EKLIRPVELWDQYTASRPYYKYSKINAAATVLEKNEPFTLGSMFKKSLLTFPRLEDADSF SVSLSILSEDLSLHTSAVADQISGSANQRVEIEMEILSLGQMFGPLTNGSIGEKENSYHA KAEYTEKQLLLNVSAQLSLTGTSYSNISLLFVEGMYDPHVGNMYLIGCRDVRASWKILSE SMDLEAGLDCLIEVVITYPPTTARWLVNPTAKISVSSQRNDDDPLYFNPVNIKTFPIMYR KQREDILSRRGVEGILRILTLSLAIFCILSQLFYIRGNAESVPYVSLAMLGVQAVGYGLP LITGAEALFKMMGAEINETPSYDLENSQWIRLIDYTVKVLVLVAFLVTARLSQKVWRSRI RLSARSPLEPHRVPSDKWVLVSTVVMHVAGYIIVLFIHSFNTSQKPLHAERYVDSTGNFH TLREWETELEEYMGLIQDFFLLPQVIGNLFWQIHCKPLRKLYYIGLTSVRLLPHVYDYIR SPVPNPYFSEEYEFVNPRFDFYTKFGDIAIPVAAVVLAVVVYIQQRWNYEKLSQTLRLGK IKLLPVGSRVYERLPSAEAELTSGVKDRDVD*

Transcript Sequence

Transcript ID	Solyc03g119920.1.1
Transcript Infomation	LOW QUALITY:Cytochrome b559 subunit alpha (AHRD V3.3 --* PSBE_ADICA)
Sequence	ATGTCTTTTTTTGCTTCTTATTGGACAATGGCTAGTATTATTATCTGGTTGATGTTGTTG TCTGTTGGTTTTGTTCATTCTTATGTGGTAGATGGAGAGTTAGGACCTAGGACTAGAACT TCTATGCCTTACAAATATGAAAGAACTGATGAAGTCAAAAAAGAATGTGCTTTTGTTTTA GCTTCTGCTTCTGAATTGGAACCTGATGATAACAGAATTTATAGCATAAAACATGAATTA AGTTTTCTGAATGGAGATTGGAGGCAAGTGTCTAATGGGGCTGCTTCAATAATGCCTTTT GATGATAGAGATCTTTCAAACAGATCATCGGATCTTCGATCTCCGTTGAACTTAGTTTCT TTTTGGGTTACGAATGTTGATCGTGCTCATCAGTCTAAGAAATCAGTGAGTGTGAGTGGG ATATTGCAGATTGGTATCACCCTAGATGGCTTGTTTTCAAGTAAACCATATGAGAGAAGT CCTCATTTTGATATTTGGCCCGGTCATTCCCAGCTTTCGGTGACTTTTGAAGGAGTATAC ATTGAATCGAAGAAAAATCAAGGGGAAAGAGTCATGTGTTTGTTGGGGACAACAATGTTG CCTTCTCGTCAGCAAGAGTCTACTGATCCATGGCAGTGGGTAAAGGAATCTGGTTATACT AATCAGCCACCTCTTATGCAAGATGATCAAATTTTGCTCGTGCTTCATTATCCTAGAACA AATACACTGACAAATAGAGCTGTTCTAGGAACCATGAAAAGCTTAAACCCAAAGACGAGT TTTAAGTACTTTGATGAAGTTCATATGTCTTCTTGGCTGGGAACTTCTTCAAAGTACGAA TTCGGCTCTGAAAAGTTTGTGTCAAAAGCTTGTGATCCATATCCGTACAAAGATAGTCTG AGTACTGAGATAAATACTTATCGAGGGCTTGACTTCTGTTATATTCTTCAAAGATTCACT CAGCAAGAAGCCTTAACAGTTGTGCCAAACTGGAAATGCAACGGTACAGATGATTTTTGC AGTCAATTGGGTCCATTCAGATCGGACAAGGAGATAAATGCCACTGATGGGGGTTTTAAG GACGTCAAGCTTGTCCTTCAGGATGTTCGATGTGATACAATATCTGTAAAAGATAATGTC ACTTCTTCTAGGGTCTCTTCTGTGTTTAGAGTGATTTCTCCATTGGAGAATCAGTTCACC GCAGCACAAAGGACTGGGCTTAGTAACATGACTCTTTCTGCTGAGGGAATTTGGAAATCT TCCAGTGGACAGCTTTGTATGGTTGGTTGCCGAGGAGTAGTTGGTGCAGAAGACAGCAAC TGTGATTCGCGAATCTGCTTGTATGTTCCACTCTCCTTTTCTATAACACAAAGGAGCATA ATTATTGGCCATTTTTCCAGTATTGATGGAAGCAGTAGGCGTTACTTTCCTTTATCATTT GAGAAACTGATCCGCCCTGTTGAGCTGTGGGATCAATATACTGCTTCTCGTCCATACTAC AAATACTCAAAAATCAATGCAGCTGCTACAGTCCTTGAGAAAAATGAGCCCTTTACCCTT GGTTCAATGTTTAAGAAATCACTGTTGACATTCCCAAGACTGGAGGATGCAGATTCTTTT TCCGTCAGCCTTTCGATTCTTTCTGAAGATCTCTCCCTACACACCTCAGCAGTTGCAGAT CAAATCTCTGGTTCAGCTAACCAAAGAGTTGAAATTGAAATGGAGATTCTTTCTCTTGGT CAAATGTTTGGGCCTTTGACAAACGGTTCCATCGGTGAAAAAGAGAATTCTTATCATGCT AAGGCTGAATACACAGAAAAACAGCTTCTCTTAAATGTTTCTGCTCAACTTAGTCTCACT GGGACGTCATACAGTAACATCTCGTTGCTTTTTGTTGAGGGAATGTATGATCCACATGTC GGAAATATGTACCTCATTGGTTGCAGGGATGTTCGAGCCTCTTGGAAAATTCTATCAGAA AGTATGGACCTTGAGGCTGGATTGGATTGTCTGATTGAGGTGGTTATAACATACCCACCA ACCACTGCTCGTTGGTTGGTCAATCCAACAGCTAAAATCTCCGTATCCTCTCAAAGAAAT GATGATGATCCACTCTACTTTAATCCCGTAAACATTAAAACATTCCCCATTATGTACAGG AAGCAGCGAGAAGACATTCTTTCCCGTAGGGGCGTAGAGGGCATCCTGCGCATCTTGACA CTCTCTCTGGCAATATTTTGCATTCTCAGCCAACTATTTTACATCAGAGGTAATGCGGAA TCGGTCCCGTATGTCTCGCTTGCCATGCTAGGTGTCCAAGCTGTTGGATACGGCCTACCT TTGATCACAGGTGCAGAAGCTTTGTTCAAAATGATGGGTGCTGAAATCAATGAGACTCCA TCTTATGATCTTGAAAACAGCCAGTGGATTCGTCTGATTGATTATACTGTCAAGGTTCTT GTGCTAGTTGCCTTTTTAGTAACAGCGAGGCTCAGCCAAAAGGTGTGGAGATCCCGTATC AGATTATCAGCAAGGAGCCCTCTTGAACCACACCGTGTTCCAAGTGACAAATGGGTACTT GTCAGTACAGTGGTAATGCATGTTGCTGGATATATCATTGTTCTGTTTATCCACTCCTTC AATACAAGCCAGAAACCTCTTCATGCTGAACGTTACGTAGATTCCACTGGAAATTTTCAC ACCTTGAGGGAATGGGAAACTGAATTGGAGGAGTACATGGGTTTGATTCAAGATTTCTTT TTGCTTCCTCAAGTAATAGGAAACCTTTTTTGGCAAATCCATTGCAAACCACTGAGGAAG CTATATTATATTGGACTTACGTCGGTTAGACTTCTGCCTCATGTGTATGATTACATCAGA TCTCCTGTTCCCAATCCCTATTTCTCGGAAGAGTACGAGTTTGTGAACCCCAGGTTTGAT TTTTACACAAAGTTTGGAGACATTGCCATACCAGTGGCTGCAGTTGTACTGGCAGTTGTT GTGTATATTCAGCAGAGGTGGAACTATGAGAAGCTTAGCCAGACACTTAGATTGGGCAAG ATTAAGCTTCTACCAGTTGGGTCCCGAGTTTATGAGAGGTTACCTTCTGCTGAAGCTGAA CTTACCTCCGGTGTCAAAGACCGGGATGTGGACTGA