Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g119730.3.1
CDS Infomation

Histone deacetylase (AHRD V3.3 *** A0A023IUN7_ARAHY)
Sequence

ATGATCTTAGTGCAAAAATGTGTTACTAATTCTGAAGGCAATGAGATCTCAGAATCATCT
AAAATGAGCAATTTAACTGGTGGAAAGACTGAAACCAATCTTCCAAATCAATCGGGAGTT
GCTCTATGTCAAGATTTAAATGGAAGATTAGACGGGGTTGGCTCCGCGGTTGTTTGTGAT
TATACTTGTCATAATGATGGACAATCTGGGGAGGTGTCACAACTTGGTACTAGAGACTCA
GATGGGATCTCTGGTTTGAATGCTGATCCAGCTGCTATAACTAAAAGTGCTAAGCACGAA
AGTGATATGACCTTGGAGGATATGTATAATGCTCGGTATAATTTTGACGAGGATGATGAT
GACAGTGACTGGGAACCATCAGAAAAGCAAATAGAAGTTCTGAAGTGGTTCTGTGTCAAT
TGTTCAATGATCAATGTCGAGGATGTTGGCAATTGTGAAGTATGCGGAGAACACAGAGAA
TCTGGGATACTCAGGCATGGATTTTTTGCATCTCCATATCTGCCTGTAGAAGATATCAAC
CAAGATGAATTGCCTGTAACTGAAGATTCTGAAGATTCATGCAAGCAAAGTTCTTTATCA
TCCTCCACTGCTGTAGGGTTTGACGAGAGGATGTTGCTTCACACAGAAGTCGTATTGAAG
TCTCATCCACATCCTGAGAGACCAGACCGTCTTCGAACCATTGCAGCTAGCCTTGCAACA
GCAGGTATATTCCCAGGGAAGTGCCATCCCATTCCTGCAAGAGAGATTACTAGGGAAGAA
CTCCAGATGATACACTCAGAGGAAAATATTGAAGCCGTTGATAACACCAAGCGTATGCAT
GCCAGTTATTTCACACCTGATACCTATGCAAATGAATATTCAGCATGTGCTGCCAGGCTT
GCAGCAGGTTTATGTGCTGACCTTGCTTCAGCAATTTACTCTGGATGCGTCAAAAATGGT
TTTGCTCTGGTTCGTCCTCCTGGCCACCATGCTGGTGTGAAACAGGCCATGGGCTTCTGT
CTCCACAACAATGCAGCAATTGCTGCATCAGCAGCTCAGGCGGCTGGTGCAAAGAAGGTG
TTAATAGTTGATTGGGATGTGCATCATGGGAATGGCACACAAGAAATATTTGAGAGAAGC
AAATCGGTTTTGTATATATCATTGCATAGACATGAGGGTGGAAGATTCTACCCTGGTACA
GGAGCTGCAGATGAGGTTGGTTCTATGGGTGCAGAAGGATACTGTGTGAATATTCCTTGG
AGCCGTGGGGGAGTGAGTGACAATGACTACATTTTTGCATTTGAGCAAGTCGTGCTTCCC
ATAGCTTTGGATTTCAATCCAGACTTTACTATCATTTCAGCAGGATTTGATGCTGCTAGG
GGTGACCCCCTTGGCTGCTGTGACGTAACTCCTGCTGGTTATGCATCAATGACTCAGATG
TTGAGTGCATTGTCAGGTGGAAAATTGCTTGTTATTTTGGAAGGCGGCTACAATCTTCGC
TCAATTTCATCATCAGCTACAGCAGTGATTAAGGTCTTGCTTGGTGAAAGTCCAGTGATT
GACATAGACAAAGCTGTACCTTCCAAAGCTGGACTGCGAAGTGTTTTGGATGTTCTAAAG
ATTCAGATGAACTTCTGGCCTACACTGGAGGCAAACTTCACTAAATTGCATTCGCAGTGG
GGATCCTATGCTTTTCAGGACACAAGAGAACAGAGTAAAAAAAGACGCAGGACTGGTTTA
CCAATATGGTGGAGATTGGGACGAAAGAGGCTGTTGTATCGCGTACTGTCCAAGCAGCTG
CGTGCAAAGTCCTCTTGTAATTTTTCTTGTTGA

Peptide Sequence

PEP ID

Solyc03g119730.3.1
PEP Infomation

Histone deacetylase (AHRD V3.3 *** A0A023IUN7_ARAHY)
Sequence

MILVQKCVTNSEGNEISESSKMSNLTGGKTETNLPNQSGVALCQDLNGRLDGVGSAVVCD
YTCHNDGQSGEVSQLGTRDSDGISGLNADPAAITKSAKHESDMTLEDMYNARYNFDEDDD
DSDWEPSEKQIEVLKWFCVNCSMINVEDVGNCEVCGEHRESGILRHGFFASPYLPVEDIN
QDELPVTEDSEDSCKQSSLSSSTAVGFDERMLLHTEVVLKSHPHPERPDRLRTIAASLAT
AGIFPGKCHPIPAREITREELQMIHSEENIEAVDNTKRMHASYFTPDTYANEYSACAARL
AAGLCADLASAIYSGCVKNGFALVRPPGHHAGVKQAMGFCLHNNAAIAASAAQAAGAKKV
LIVDWDVHHGNGTQEIFERSKSVLYISLHRHEGGRFYPGTGAADEVGSMGAEGYCVNIPW
SRGGVSDNDYIFAFEQVVLPIALDFNPDFTIISAGFDAARGDPLGCCDVTPAGYASMTQM
LSALSGGKLLVILEGGYNLRSISSSATAVIKVLLGESPVIDIDKAVPSKAGLRSVLDVLK
IQMNFWPTLEANFTKLHSQWGSYAFQDTREQSKKRRRTGLPIWWRLGRKRLLYRVLSKQL
RAKSSCNFSC*

Transcript Sequence

Transcript ID

Solyc03g119730.3.1
Transcript Infomation

Histone deacetylase (AHRD V3.3 *** A0A023IUN7_ARAHY)
Sequence

CCGTGTCCTTTTCTTGAAATAAAAGAAAAACGGAAAAAGCCCTAGAAAAATAGCCTTCCC
ATTTATTACGTCATAAGTAAACTGTTCATCTTCCTCGCCGAACAAACCCTCTCTCGTTCT
CCGTCATAGAAACGCTGAGACGAGACTTAAACTTGCAGTTCTACAGCTCCAAATCACAAG
AAATTTCTTCGTTTTGTGCAGAAACATTCCAAGTTCGTGCCAACGCCTTTGGTCTGATTA
CAACAGGAAAAACATGGAGTTGTATCTTATACAAAGGAGGGAGAAGTTGAACGACAAGAG
CTTTTTGGAGTTTGTGAAAAAAAAAATGATTGTGATCATTGTGGAGAAATGATCTTAGTG
CAAAAATGTGTTACTAATTCTGAAGGCAATGAGATCTCAGAATCATCTAAAATGAGCAAT
TTAACTGGTGGAAAGACTGAAACCAATCTTCCAAATCAATCGGGAGTTGCTCTATGTCAA
GATTTAAATGGAAGATTAGACGGGGTTGGCTCCGCGGTTGTTTGTGATTATACTTGTCAT
AATGATGGACAATCTGGGGAGGTGTCACAACTTGGTACTAGAGACTCAGATGGGATCTCT
GGTTTGAATGCTGATCCAGCTGCTATAACTAAAAGTGCTAAGCACGAAAGTGATATGACC
TTGGAGGATATGTATAATGCTCGGTATAATTTTGACGAGGATGATGATGACAGTGACTGG
GAACCATCAGAAAAGCAAATAGAAGTTCTGAAGTGGTTCTGTGTCAATTGTTCAATGATC
AATGTCGAGGATGTTGGCAATTGTGAAGTATGCGGAGAACACAGAGAATCTGGGATACTC
AGGCATGGATTTTTTGCATCTCCATATCTGCCTGTAGAAGATATCAACCAAGATGAATTG
CCTGTAACTGAAGATTCTGAAGATTCATGCAAGCAAAGTTCTTTATCATCCTCCACTGCT
GTAGGGTTTGACGAGAGGATGTTGCTTCACACAGAAGTCGTATTGAAGTCTCATCCACAT
CCTGAGAGACCAGACCGTCTTCGAACCATTGCAGCTAGCCTTGCAACAGCAGGTATATTC
CCAGGGAAGTGCCATCCCATTCCTGCAAGAGAGATTACTAGGGAAGAACTCCAGATGATA
CACTCAGAGGAAAATATTGAAGCCGTTGATAACACCAAGCGTATGCATGCCAGTTATTTC
ACACCTGATACCTATGCAAATGAATATTCAGCATGTGCTGCCAGGCTTGCAGCAGGTTTA
TGTGCTGACCTTGCTTCAGCAATTTACTCTGGATGCGTCAAAAATGGTTTTGCTCTGGTT
CGTCCTCCTGGCCACCATGCTGGTGTGAAACAGGCCATGGGCTTCTGTCTCCACAACAAT
GCAGCAATTGCTGCATCAGCAGCTCAGGCGGCTGGTGCAAAGAAGGTGTTAATAGTTGAT
TGGGATGTGCATCATGGGAATGGCACACAAGAAATATTTGAGAGAAGCAAATCGGTTTTG
TATATATCATTGCATAGACATGAGGGTGGAAGATTCTACCCTGGTACAGGAGCTGCAGAT
GAGGTTGGTTCTATGGGTGCAGAAGGATACTGTGTGAATATTCCTTGGAGCCGTGGGGGA
GTGAGTGACAATGACTACATTTTTGCATTTGAGCAAGTCGTGCTTCCCATAGCTTTGGAT
TTCAATCCAGACTTTACTATCATTTCAGCAGGATTTGATGCTGCTAGGGGTGACCCCCTT
GGCTGCTGTGACGTAACTCCTGCTGGTTATGCATCAATGACTCAGATGTTGAGTGCATTG
TCAGGTGGAAAATTGCTTGTTATTTTGGAAGGCGGCTACAATCTTCGCTCAATTTCATCA
TCAGCTACAGCAGTGATTAAGGTCTTGCTTGGTGAAAGTCCAGTGATTGACATAGACAAA
GCTGTACCTTCCAAAGCTGGACTGCGAAGTGTTTTGGATGTTCTAAAGATTCAGATGAAC
TTCTGGCCTACACTGGAGGCAAACTTCACTAAATTGCATTCGCAGTGGGGATCCTATGCT
TTTCAGGACACAAGAGAACAGAGTAAAAAAAGACGCAGGACTGGTTTACCAATATGGTGG
AGATTGGGACGAAAGAGGCTGTTGTATCGCGTACTGTCCAAGCAGCTGCGTGCAAAGTCC
TCTTGTAATTTTTCTTGTTGATGTTGATCCTTGTTGTAAGCTAAAGGCATTAGGTCTAGA
CTGTTGTTGTTTTGTAAGCCTGCCCTACTGTTCCTTTTTTTCTTGTTTTGTTTAGTCATT
GTACCTCTAACTAAATCTCTCCCTGGACGTTCTCGGATGGTAGTTATCTTGCAGTGTTCT
ATTTCTAATCCATCAACGTGCGTACGAGTTATTATGGTTTAATAAAAATAACAACAATCT
CATAAGTGGGTAAGGTAATGGTAGGATGAACAAATACTGTATCTGTATCTGAGAGTGATA
GTATACCCGCTGTTTGAAATAAAAGTAATGGAATTGTAAGAAAATAAGACAGTGAAATAG
CAAAATACAAAACTGAGGCAGCATTTAGTGGTATAGAATGAAAGAACTTGCCTTCTTGTG
TCCATTCATGTAACTGTCAACAATTAGAGTCGTTGCCATTGCTGTTGGTGGAATTGAAAT
GTAGAAATAAAATAGAATGTCGAGTTTTATAGTTGAACTAAAGGTGACAAATATCTTCAA
GACCATTACCCCTTTCCCTGATCTAAAAGGCAACCCTCGCATGCTAAACGTCGCCGTTCA
ATAGGTTATAAACTG