Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g119540.3.1
CDS Infomation

CONSTANS-like zinc finger protein (AHRD V3.3 *** I1LEW9_SOYBN)
Sequence

ATGATGACTAGTGAAAGTAAGACGGCAAATGCTATAGGAGGAAAAACAGCTAGAGCTTGT
GATAGCTGTTTGTCAAAGAGAGCACGTTGGTTTTGCCCAGCTGATGATGCCTTTCTTTGT
CAATCGTGCGATGTTTCGATTCATTCGGCGAACCAATTGGCGAGTCGGCATGAACGTGTT
CGTCTCGAAACATGTTCTAACAAATCAACCATTACAAAATTAGTCGACAAAACTCATCAA
CCTTCTTGGCACCAGGGATTTACTCGAAAGGCTAGAACGCCGAGAAATGGAAAAAAGGCA
CAAATCAGGCAATGGAAAAAGAACGAGGAAAATCGGGTACCGGAAATTGGCAGCGAAGAG
AACTCGTTGGATGAAAATGAATTCGAAAACGAAGAGCAGCTGCTTTATCGAGTTCCAATT
TTCGATCCGTTTGAAGCAGAACTCTGCAATGTGCCAGATGAAACTGGATCTATTGTTGAT
CTGGACATTTTGTTGAACACTGAAGATGCTTGCCATGATCTGAACCTTCCTGAGTTTCTT
TCATCTGATATTGAGCTTGCTGAATTCGCTGCGGATGTTGAAACCTTACTGGGAGGCGAA
GAAGAACAGAGTACTCAGTTATTAAACGCGGATTTTGAAAATAACAAGGCGATTAAAATT
GAAGTTGAAGACGAAGAAATGAGAGCTGTTGTTGCTTGTCATTTGGATCCTGAATTGGAT
ATGGAAAGGGAAGCACTGAATTGGAACTTTGATGAATATTATGAAGAAACAGTTGAGCAG
AAAGTAATGGCAGCAGATGCAGCAGTAACAGAATTTATCGCTAGTGCAGAAGAGTACAGT
GGTAGCAGTACAAAATCTGATGAAAAAAACAGACTGTTTCTCAGTCTTAATCATGAGGCG
GTTATTAGTGCTTGGCCAAATCAATCTTCTCCATGGACAAATGGAATCCGACCCCATTTC
AATCCTGATGACTACTGGCCCGATTTTTTCTCGGAAACAAGTGTAGGTAATTATGGGGGA
CATGTAAGATGTGGCGATGGAGGAAGAGAAGCAAGGGTATCGCGTTACAGAGAGAAGAGA
CAGAACAGATTGTTTTCGAAGAAAATTCGATATGAAGTTAGGAAATTGAACGCAGAAAAA
AGGCCTAGGCTGAAAGGACGATTCATTAAAAGGAGCTCATCGTTGTTTTCAGTGCCTGGT
TTTTCTTACATGATGAATAAACGATGA

Peptide Sequence

PEP ID

Solyc03g119540.3.1
PEP Infomation

CONSTANS-like zinc finger protein (AHRD V3.3 *** I1LEW9_SOYBN)
Sequence

MMTSESKTANAIGGKTARACDSCLSKRARWFCPADDAFLCQSCDVSIHSANQLASRHERV
RLETCSNKSTITKLVDKTHQPSWHQGFTRKARTPRNGKKAQIRQWKKNEENRVPEIGSEE
NSLDENEFENEEQLLYRVPIFDPFEAELCNVPDETGSIVDLDILLNTEDACHDLNLPEFL
SSDIELAEFAADVETLLGGEEEQSTQLLNADFENNKAIKIEVEDEEMRAVVACHLDPELD
MEREALNWNFDEYYEETVEQKVMAADAAVTEFIASAEEYSGSSTKSDEKNRLFLSLNHEA
VISAWPNQSSPWTNGIRPHFNPDDYWPDFFSETSVGNYGGHVRCGDGGREARVSRYREKR
QNRLFSKKIRYEVRKLNAEKRPRLKGRFIKRSSSLFSVPGFSYMMNKR*

Transcript Sequence

Transcript ID

Solyc03g119540.3.1
Transcript Infomation

CONSTANS-like zinc finger protein (AHRD V3.3 *** I1LEW9_SOYBN)
Sequence

GAGCAATTATTGTACTAACGATCCTTTATATATATCGAACTGTTCCACTTTGTTTTTTGG
GCTTGTTCAAATTCCTTTTAATTGAATCCTCCGTAGCGTTTACGAATTTCACTATATTCT
CCTTCGGATCTCGTTTTGATATTATATCAGAACGATTGTAAATGATGACTAGTGAAAGTA
AGACGGCAAATGCTATAGGAGGAAAAACAGCTAGAGCTTGTGATAGCTGTTTGTCAAAGA
GAGCACGTTGGTTTTGCCCAGCTGATGATGCCTTTCTTTGTCAATCGTGCGATGTTTCGA
TTCATTCGGCGAACCAATTGGCGAGTCGGCATGAACGTGTTCGTCTCGAAACATGTTCTA
ACAAATCAACCATTACAAAATTAGTCGACAAAACTCATCAACCTTCTTGGCACCAGGGAT
TTACTCGAAAGGCTAGAACGCCGAGAAATGGAAAAAAGGCACAAATCAGGCAATGGAAAA
AGAACGAGGAAAATCGGGTACCGGAAATTGGCAGCGAAGAGAACTCGTTGGATGAAAATG
AATTCGAAAACGAAGAGCAGCTGCTTTATCGAGTTCCAATTTTCGATCCGTTTGAAGCAG
AACTCTGCAATGTGCCAGATGAAACTGGATCTATTGTTGATCTGGACATTTTGTTGAACA
CTGAAGATGCTTGCCATGATCTGAACCTTCCTGAGTTTCTTTCATCTGATATTGAGCTTG
CTGAATTCGCTGCGGATGTTGAAACCTTACTGGGAGGCGAAGAAGAACAGAGTACTCAGT
TATTAAACGCGGATTTTGAAAATAACAAGGCGATTAAAATTGAAGTTGAAGACGAAGAAA
TGAGAGCTGTTGTTGCTTGTCATTTGGATCCTGAATTGGATATGGAAAGGGAAGCACTGA
ATTGGAACTTTGATGAATATTATGAAGAAACAGTTGAGCAGAAAGTAATGGCAGCAGATG
CAGCAGTAACAGAATTTATCGCTAGTGCAGAAGAGTACAGTGGTAGCAGTACAAAATCTG
ATGAAAAAAACAGACTGTTTCTCAGTCTTAATCATGAGGCGGTTATTAGTGCTTGGCCAA
ATCAATCTTCTCCATGGACAAATGGAATCCGACCCCATTTCAATCCTGATGACTACTGGC
CCGATTTTTTCTCGGAAACAAGTGTAGGTAATTATGGGGGACATGTAAGATGTGGCGATG
GAGGAAGAGAAGCAAGGGTATCGCGTTACAGAGAGAAGAGACAGAACAGATTGTTTTCGA
AGAAAATTCGATATGAAGTTAGGAAATTGAACGCAGAAAAAAGGCCTAGGCTGAAAGGAC
GATTCATTAAAAGGAGCTCATCGTTGTTTTCAGTGCCTGGTTTTTCTTACATGATGAATA
AACGATGATGATGAATTGATCTTGATGTAGTTGATAGTAGAGTTTGTATTATAACATCAC
CATTTTGCTTACACTAGCAATCTGGAATGACTTAGGTTCTTTTT