Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g119470.2.1
CDS Infomation

DUF1666 family protein (AHRD V3.3 *** G7KN40_MEDTR)
Sequence

ATGCAATGTTCTAATGAAACAATTGCAAGGCTATTCTACAATGTCTCAAGCTCATTTCAA
CTTTTCCTTATTTTCTCGTACTTCACTTCTATTTTACTTGGCAAAGTCTTCTACTTTCTC
GGTGGAAATCCATTTTTCTGGAGGAATCGAGTTAATGGATATGAATTTGCTGAGTTTTCA
GACGAAGAAAATGAATATAATTATCATAACAAAGCTGAAACAGGGGAGGAAAAACATTTT
CTAGCACACACATTTGGCGAAAGTGAAAAAGTTGAATATAACTTAAATAGCAGAGTTGCT
GATGAAGTAGATTCTGTTTATGCATCAGTAGCTTCAGAATCTGTTCATACTGATGATGAT
GACGACGATGTTGAAGAGAAGAATCTCAAATTGGATACTTACAAATGCGATTTGAACACG
ATGGATAATCAGGGGAAATTCACGAAGGATAAGAAAGTAAAGAAGAGTAAAAAGTTACGT
AGAGAGGATAATTTCTTGGTTTATGCACCAGCTAAGTTAGAGAGCAAGAAACTCGAATTC
CGAAAAAAGGAGGATAATAATGTTGATAAAATATTTGGGGATTCTTATAGTGTTGGATCC
ATTTCTAAGAGTTCTTCTGAATGGAGAAGCTCCATTAAAGATTCGGGTACTGAAGAAGAA
GATCCGTTTTCGTCTTCTTCAAGAAGAAGTTGCCCAAAATGGGAATCTTACACTGTCTTC
CAAAAATATGATGAAGAAATGTTGTTTTTAGATAAAATCAGTGTACAAAAACTCCATGAA
ACAGAGTCACTAAGATCCATTCAATCATGTCCAAGATCAATATCAGACAGGATTGTTCAT
AAATTGGCAGTGAAAAACAGGAAATCATCGGAATTTCGACACAATCCATATCATGAATTA
GAGGCTGCGTATGTAGCACAGGTATGCTTAGCATGGGAAGCACTGAGCTGGAACTACAAA
TACTTCAAAAGCCTAAGAGCTTCGCGTCTTGAAGAGGATCCAGGTTGTCCTGCTTATGTA
GCTCAACATTTTCAACAATTTCAAGTGCTTTTACAAAGATACATTGAGAATGAACCATAT
GAACATGGTAAGAGGCCTGAAGTTTATGCTAGGATGAGAAGTTTAGCTCCAAAGTTGCTT
CAAGTTCCTGAATATAGAGATTCAGATGAGGAAAAGGGACAAGAAGAATTATGGTCGAGA
ATATCATCAGATTCATTTCTTGGGATAATGGAAGAAGCAATGAGAACATTTATGAAATTC
CTCAAAGCAGACAAAGAGAATCCTTGTCAATTACTAATGACAGCTTTCTTTAGGAGAAAC
AAAAGAGCCTCTACTGACCCTACTCTTCTCCTCTTACTCAAGAAAGTCAACAAAAAGAAA
AAGACAAGGGTGAAGGATATTGGTAGGTCAGGAAAATGCAGCTTGGGAAAAAGGAGATTA
AAAGAAGAAGAAGAAATGGATATATTGATGGGATTAATAGATTTAAAAGTGGTATCAAGA
GTATTAAGAATGAGTGAAGTGAATGATGAACAATTGCATTGGTGTGAAGACAAAATGAGC
AAAGTCAGAGTTTCTGATGGCAAATTACATAGAGATGCTTCACCACTTTTTTTCCCAGCA
CACATTAGTTGA

Peptide Sequence

PEP ID

Solyc03g119470.2.1
PEP Infomation

DUF1666 family protein (AHRD V3.3 *** G7KN40_MEDTR)
Sequence

MQCSNETIARLFYNVSSSFQLFLIFSYFTSILLGKVFYFLGGNPFFWRNRVNGYEFAEFS
DEENEYNYHNKAETGEEKHFLAHTFGESEKVEYNLNSRVADEVDSVYASVASESVHTDDD
DDDVEEKNLKLDTYKCDLNTMDNQGKFTKDKKVKKSKKLRREDNFLVYAPAKLESKKLEF
RKKEDNNVDKIFGDSYSVGSISKSSSEWRSSIKDSGTEEEDPFSSSSRRSCPKWESYTVF
QKYDEEMLFLDKISVQKLHETESLRSIQSCPRSISDRIVHKLAVKNRKSSEFRHNPYHEL
EAAYVAQVCLAWEALSWNYKYFKSLRASRLEEDPGCPAYVAQHFQQFQVLLQRYIENEPY
EHGKRPEVYARMRSLAPKLLQVPEYRDSDEEKGQEELWSRISSDSFLGIMEEAMRTFMKF
LKADKENPCQLLMTAFFRRNKRASTDPTLLLLLKKVNKKKKTRVKDIGRSGKCSLGKRRL
KEEEEMDILMGLIDLKVVSRVLRMSEVNDEQLHWCEDKMSKVRVSDGKLHRDASPLFFPA
HIS*

Transcript Sequence

Transcript ID

Solyc03g119470.2.1
Transcript Infomation

DUF1666 family protein (AHRD V3.3 *** G7KN40_MEDTR)
Sequence

AATATATATAGTTTAATTTTTCGATACAGGGTTCCCTTCCGATACCCTAGCTCCGTCCAT
GTTGCCTGCACCAGAGTATTCTAGTGGAGTAATTCTTTTGTAAAGAGCAAGTTACAAATG
CGTGTGGCTGGGTTTTGGTCTCTTCTTTTTAAAAATTATTTTTTTGTGTTTTTATTATGG
AATAAATAATTGATCTAGAAAAAAAGCAAAGGACCATCTTGACAAACAAGGATATTTGTG
AAAGCAATTAAAGGACTGACCTTTTTATTATTTAGTGTCACTTTGTTATTTTTTGCTTTA
CCTAAGTAAAGAAGAGGATCATTAGAAACTCGAAAACATTCATAATTTCAACAAAATTTA
GGAAAACAATGCAATGTTCTAATGAAACAATTGCAAGGCTATTCTACAATGTCTCAAGCT
CATTTCAACTTTTCCTTATTTTCTCGTACTTCACTTCTATTTTACTTGGCAAAGTCTTCT
ACTTTCTCGGTGGAAATCCATTTTTCTGGAGGAATCGAGTTAATGGATATGAATTTGCTG
AGTTTTCAGACGAAGAAAATGAATATAATTATCATAACAAAGCTGAAACAGGGGAGGAAA
AACATTTTCTAGCACACACATTTGGCGAAAGTGAAAAAGTTGAATATAACTTAAATAGCA
GAGTTGCTGATGAAGTAGATTCTGTTTATGCATCAGTAGCTTCAGAATCTGTTCATACTG
ATGATGATGACGACGATGTTGAAGAGAAGAATCTCAAATTGGATACTTACAAATGCGATT
TGAACACGATGGATAATCAGGGGAAATTCACGAAGGATAAGAAAGTAAAGAAGAGTAAAA
AGTTACGTAGAGAGGATAATTTCTTGGTTTATGCACCAGCTAAGTTAGAGAGCAAGAAAC
TCGAATTCCGAAAAAAGGAGGATAATAATGTTGATAAAATATTTGGGGATTCTTATAGTG
TTGGATCCATTTCTAAGAGTTCTTCTGAATGGAGAAGCTCCATTAAAGATTCGGGTACTG
AAGAAGAAGATCCGTTTTCGTCTTCTTCAAGAAGAAGTTGCCCAAAATGGGAATCTTACA
CTGTCTTCCAAAAATATGATGAAGAAATGTTGTTTTTAGATAAAATCAGTGTACAAAAAC
TCCATGAAACAGAGTCACTAAGATCCATTCAATCATGTCCAAGATCAATATCAGACAGGA
TTGTTCATAAATTGGCAGTGAAAAACAGGAAATCATCGGAATTTCGACACAATCCATATC
ATGAATTAGAGGCTGCGTATGTAGCACAGGTATGCTTAGCATGGGAAGCACTGAGCTGGA
ACTACAAATACTTCAAAAGCCTAAGAGCTTCGCGTCTTGAAGAGGATCCAGGTTGTCCTG
CTTATGTAGCTCAACATTTTCAACAATTTCAAGTGCTTTTACAAAGATACATTGAGAATG
AACCATATGAACATGGTAAGAGGCCTGAAGTTTATGCTAGGATGAGAAGTTTAGCTCCAA
AGTTGCTTCAAGTTCCTGAATATAGAGATTCAGATGAGGAAAAGGGACAAGAAGAATTAT
GGTCGAGAATATCATCAGATTCATTTCTTGGGATAATGGAAGAAGCAATGAGAACATTTA
TGAAATTCCTCAAAGCAGACAAAGAGAATCCTTGTCAATTACTAATGACAGCTTTCTTTA
GGAGAAACAAAAGAGCCTCTACTGACCCTACTCTTCTCCTCTTACTCAAGAAAGTCAACA
AAAAGAAAAAGACAAGGGTGAAGGATATTGGTAGGTCAGGAAAATGCAGCTTGGGAAAAA
GGAGATTAAAAGAAGAAGAAGAAATGGATATATTGATGGGATTAATAGATTTAAAAGTGG
TATCAAGAGTATTAAGAATGAGTGAAGTGAATGATGAACAATTGCATTGGTGTGAAGACA
AAATGAGCAAAGTCAGAGTTTCTGATGGCAAATTACATAGAGATGCTTCACCACTTTTTT
TCCCAGCACACATTAGTTGAATGAGTTTAAGTTTTTATTTTTTTTAATTGTTTGACTAAA
TAATTTTTCACACTATCGAATCGATATTTATAAGTAGATTTCCCTTTTAAAATGTAGGAT
TTAAAATATTAAAAATAAAATATGTAACCTGTTATAAGCTGATAGAAATAATTTGATAGT
GTAAATTTACGTTAACCATGTATATTTCTTAAACTCTAGCTAGTTTAATACCCTCATGAA
CTTGTTGTTTTGTAAATAAGTACTGTAATAAAAGAGTGGGTAACCCATGCATAGTAGAAA
TTAAAGTAAGTTCAAATATGCATGTGGTCTGTGGGGATGACAAAAGAATTTTATGAACAA
TTTTGATAAAAGTGAATTATTGTCTCACTTTCTTTTTTTGATATTTAAAAAAAAAAAAAG
ACCTAAAATAACT