Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc03g119450.3.1
CDS Infomation	Chloroplastic group IIA intron splicing facilitator CRS1 (AHRD V3.3 *** W9QX15_9ROSA)
Sequence	ATGGCCTTGTCGACGGCGAAATTTACACAATTGACACCACAGTTGTTCTCTTCCTTCTCT ACGCCTACTGATCGACCTCCATTTTTCCTTTTCCTTCGCCGCACTATCACCGCCGGTAAC ACCAGAACCAACATCCCCCGGAAGGATAATCGGAAACCTTACAGAGATTCAAATTCCAGT TCTACCCCTGTGAAATCAAACAACTCTCGCTCTTCTACTTGGCTAAACAAATGGCCCAAT ACATCTTCTCCAGTAAAGCATTCATCCAATTCCAGAACCGTCGAATCCAAAACGGAAACC AGATATTTTGACGAGAACACTAGAGTAGGGACTACAGCCATAGATAGGATTGTGCTTCGG TTGAGAAACTTAGGATTAGGTTCTGACGATGAAGGAGAAGGAGAAGATGAAGAAGAGGGA AATTTGAAGTTGGATTCTAGTTCGACAATGCAGGTTAACGGTGAAGAAGAGAAGTTAGGA GATTTGTTGAAGAGGGATTGGGTTCGACCGGATATGATATTGGAAGAGAGTGATGATGAG GGAGATACATATTTGCCATGGGAACGAAGTGTGGAGGAAGAGGCGGTGGAGGTGCAGAGA GGAGGGAAGAGGACGGTAAGGGCACCGTCACTGGCTGAGCTAACCATTGAGGATGAGGAA TTGAGGAGGCTGAGGAGAATAGGTATGACTTTGAGAGAAAGGATTAATGTACCTAAGGCT GGGGTTACAGGAGCAGTGTTGGAGAAGATTCATCATTCATGGAGGAAGAATGAGCTGGTA AGGCTCAAGTTTCATGAGGTTTTGGCTCATGATATGAGAACAGGCCACGAGATTGTAGAG CGTCGGACAAAAGGGCTTGTGATATGGAGGGCTGGGAGCGTTATGGTGGTGTATCGAGGA AGTAACTATGAGGGGCCTTCTTCAAGATCTCAATCTGTGAATGAGGAAGACAATGCTCTC TTTGTTCCAGATGTTTCATCTGACAAATCTATTACAAAAGACAACAAAAGCTTTAATCCA GTTATTGAAAATCGTAATCAAGTTCATCCTAATCGTGTTCAAAGCATGACTGAGGAGGAA TCAGAATTCAATAGGGTATTAGATGGTTTAGGCCCACGTTTCGAGGATTGGTGGGGTACG GGAGTACTTCCTGTTGATGCTGATTTGCTTCCTCAGACAATTCCTGGCTATAAAACACCT TTCCGACTTCTTCCTACTGGAATGAGATCACGCCTAACAAATGCAGAAATGACTAATTTA CGAAAAATTGCTAAATCACTTCCTTGTCATTTTGCTCTCGGGAGAAACAGAAATCATCAA GGGCTGGCTGCTGCTATAGTCAAGCTCTGGGAGAAAAGTTTAGTTGTGAAAATAGCAGTC AAACGTGGAATTCAGAACACAAACAACAAGCTGATGTCAGAGGAGTTAAAGATGTTAACA GGGGGGGTCCTACTTCTGAGAAACAAATATTACATAATCTTTTATCGAGGAAAGGATTTT GTCCCACCTACTGTCGCGGCTGTTTTAGCCGAAAGGCAAGAGTTGACAAAACAGATCCAA GATGTTGAAGAGCAAACACGGAGTGGGCCTGCTAAAGTGGCACCATTGATCACAGATGGA CAGGCCGTTGCCGGTTCTTTAGCAGAATTTTATGAGGCTCAGGCTCGGTGGGGGAGAGAA ATATCTGCTGAAGAACGTGAAAGAATGTTAAAAGAAGCAGCAATGGCTAAGATGGCTAGA GTAGTCAAACGTCTTGAACATAAATTTGAGATTTCCCAGACCAAGAAGCTTAAAGCAGAG AAAATTTTGGCTAAGATTGTGGAATCCTGGATTCCTGCTGGTCCTTCTGATGACCTGGAA ACGATAACAGAGGAGGAGAGGGTCATGTTGCGCAGAGTTGGACTAAGAATGAAGTCATAC CTGCCACTTGGTATTCGTGGTGTCTTTGACGGTGTTATTGAGAACATGCATCTGCATTGG AAACATAGAGAACTTGTTAAGTTAATATCAAAAGAAAAGGTACTTGCTTTCGTTGAAGAA ACAGCTAGACTTTTGGAATATGAAAGCGGTGGGATTTTAGTGGCAATAGAAAGAGTGCCA AAAGGTTATGCTCTTATTTTCTACCGTGGGAAGAACTATAGGCGGCCTATCAGCCTCAGG CCAAGGAACCTTCTGACAAAAGCAAAAGCACTAAAACGTAGAGTGGCACTGCAGCGTTAT GAGGCTCTCAGTCAGCATATAGGCGAGCTGGAGACGACAATAGAGCAAACGAAAAGTAAA ATTGTTGATTTTGGTGATACTAGCAATTTGGAGGTGCTTGATCAGTTCAATCATGTCTCG GAATCCCTAAGTGAAGATGAAGATTCATCTTTAGAGTCTGGTGATGACGAGGATGAAGAT CCTGAATGGGAAAATGATGACGATTCAGAGTACTCCAGTCTTGAGGACGATGAAACAGGA TAA

Peptide Sequence

PEP ID	Solyc03g119450.3.1
PEP Infomation	Chloroplastic group IIA intron splicing facilitator CRS1 (AHRD V3.3 *** W9QX15_9ROSA)
Sequence	MALSTAKFTQLTPQLFSSFSTPTDRPPFFLFLRRTITAGNTRTNIPRKDNRKPYRDSNSS STPVKSNNSRSSTWLNKWPNTSSPVKHSSNSRTVESKTETRYFDENTRVGTTAIDRIVLR LRNLGLGSDDEGEGEDEEEGNLKLDSSSTMQVNGEEEKLGDLLKRDWVRPDMILEESDDE GDTYLPWERSVEEEAVEVQRGGKRTVRAPSLAELTIEDEELRRLRRIGMTLRERINVPKA GVTGAVLEKIHHSWRKNELVRLKFHEVLAHDMRTGHEIVERRTKGLVIWRAGSVMVVYRG SNYEGPSSRSQSVNEEDNALFVPDVSSDKSITKDNKSFNPVIENRNQVHPNRVQSMTEEE SEFNRVLDGLGPRFEDWWGTGVLPVDADLLPQTIPGYKTPFRLLPTGMRSRLTNAEMTNL RKIAKSLPCHFALGRNRNHQGLAAAIVKLWEKSLVVKIAVKRGIQNTNNKLMSEELKMLT GGVLLLRNKYYIIFYRGKDFVPPTVAAVLAERQELTKQIQDVEEQTRSGPAKVAPLITDG QAVAGSLAEFYEAQARWGREISAEERERMLKEAAMAKMARVVKRLEHKFEISQTKKLKAE KILAKIVESWIPAGPSDDLETITEEERVMLRRVGLRMKSYLPLGIRGVFDGVIENMHLHW KHRELVKLISKEKVLAFVEETARLLEYESGGILVAIERVPKGYALIFYRGKNYRRPISLR PRNLLTKAKALKRRVALQRYEALSQHIGELETTIEQTKSKIVDFGDTSNLEVLDQFNHVS ESLSEDEDSSLESGDDEDEDPEWENDDDSEYSSLEDDETG*

Transcript Sequence

Transcript ID	Solyc03g119450.3.1
Transcript Infomation	Chloroplastic group IIA intron splicing facilitator CRS1 (AHRD V3.3 *** W9QX15_9ROSA)
Sequence	TTCGTGTTCTGAAATGGGCTTGCTTCAGGATATTAGTGTCGTGAAGTTTTAAACTTGGCT AAAACTTAAACAGTAGTCGTAAAAGTGGCTACCTGGTGCCATTTCCACGACATTTTCTGG GCCCAAGATCCTTTGCGGGCCGATATGGCAACAGTTGGGTCGGGTCATAAATTCGGAGGC TGACGTGTAGATATAAAAATATCCGAATTGATTGATACCTTATCGTCAAGCTCTGTCAAC TGAAACCATTTTGCCCTCATTACTATGAAGCTAACTGAAAGAAGAAGAAGCTGAGCTAAT TGAAAAATGGCCTTGTCGACGGCGAAATTTACACAATTGACACCACAGTTGTTCTCTTCC TTCTCTACGCCTACTGATCGACCTCCATTTTTCCTTTTCCTTCGCCGCACTATCACCGCC GGTAACACCAGAACCAACATCCCCCGGAAGGATAATCGGAAACCTTACAGAGATTCAAAT TCCAGTTCTACCCCTGTGAAATCAAACAACTCTCGCTCTTCTACTTGGCTAAACAAATGG CCCAATACATCTTCTCCAGTAAAGCATTCATCCAATTCCAGAACCGTCGAATCCAAAACG GAAACCAGATATTTTGACGAGAACACTAGAGTAGGGACTACAGCCATAGATAGGATTGTG CTTCGGTTGAGAAACTTAGGATTAGGTTCTGACGATGAAGGAGAAGGAGAAGATGAAGAA GAGGGAAATTTGAAGTTGGATTCTAGTTCGACAATGCAGGTTAACGGTGAAGAAGAGAAG TTAGGAGATTTGTTGAAGAGGGATTGGGTTCGACCGGATATGATATTGGAAGAGAGTGAT GATGAGGGAGATACATATTTGCCATGGGAACGAAGTGTGGAGGAAGAGGCGGTGGAGGTG CAGAGAGGAGGGAAGAGGACGGTAAGGGCACCGTCACTGGCTGAGCTAACCATTGAGGAT GAGGAATTGAGGAGGCTGAGGAGAATAGGTATGACTTTGAGAGAAAGGATTAATGTACCT AAGGCTGGGGTTACAGGAGCAGTGTTGGAGAAGATTCATCATTCATGGAGGAAGAATGAG CTGGTAAGGCTCAAGTTTCATGAGGTTTTGGCTCATGATATGAGAACAGGCCACGAGATT GTAGAGCGTCGGACAAAAGGGCTTGTGATATGGAGGGCTGGGAGCGTTATGGTGGTGTAT CGAGGAAGTAACTATGAGGGGCCTTCTTCAAGATCTCAATCTGTGAATGAGGAAGACAAT GCTCTCTTTGTTCCAGATGTTTCATCTGACAAATCTATTACAAAAGACAACAAAAGCTTT AATCCAGTTATTGAAAATCGTAATCAAGTTCATCCTAATCGTGTTCAAAGCATGACTGAG GAGGAATCAGAATTCAATAGGGTATTAGATGGTTTAGGCCCACGTTTCGAGGATTGGTGG GGTACGGGAGTACTTCCTGTTGATGCTGATTTGCTTCCTCAGACAATTCCTGGCTATAAA ACACCTTTCCGACTTCTTCCTACTGGAATGAGATCACGCCTAACAAATGCAGAAATGACT AATTTACGAAAAATTGCTAAATCACTTCCTTGTCATTTTGCTCTCGGGAGAAACAGAAAT CATCAAGGGCTGGCTGCTGCTATAGTCAAGCTCTGGGAGAAAAGTTTAGTTGTGAAAATA GCAGTCAAACGTGGAATTCAGAACACAAACAACAAGCTGATGTCAGAGGAGTTAAAGATG TTAACAGGGGGGGTCCTACTTCTGAGAAACAAATATTACATAATCTTTTATCGAGGAAAG GATTTTGTCCCACCTACTGTCGCGGCTGTTTTAGCCGAAAGGCAAGAGTTGACAAAACAG ATCCAAGATGTTGAAGAGCAAACACGGAGTGGGCCTGCTAAAGTGGCACCATTGATCACA GATGGACAGGCCGTTGCCGGTTCTTTAGCAGAATTTTATGAGGCTCAGGCTCGGTGGGGG AGAGAAATATCTGCTGAAGAACGTGAAAGAATGTTAAAAGAAGCAGCAATGGCTAAGATG GCTAGAGTAGTCAAACGTCTTGAACATAAATTTGAGATTTCCCAGACCAAGAAGCTTAAA GCAGAGAAAATTTTGGCTAAGATTGTGGAATCCTGGATTCCTGCTGGTCCTTCTGATGAC CTGGAAACGATAACAGAGGAGGAGAGGGTCATGTTGCGCAGAGTTGGACTAAGAATGAAG TCATACCTGCCACTTGGTATTCGTGGTGTCTTTGACGGTGTTATTGAGAACATGCATCTG CATTGGAAACATAGAGAACTTGTTAAGTTAATATCAAAAGAAAAGGTACTTGCTTTCGTT GAAGAAACAGCTAGACTTTTGGAATATGAAAGCGGTGGGATTTTAGTGGCAATAGAAAGA GTGCCAAAAGGTTATGCTCTTATTTTCTACCGTGGGAAGAACTATAGGCGGCCTATCAGC CTCAGGCCAAGGAACCTTCTGACAAAAGCAAAAGCACTAAAACGTAGAGTGGCACTGCAG CGTTATGAGGCTCTCAGTCAGCATATAGGCGAGCTGGAGACGACAATAGAGCAAACGAAA AGTAAAATTGTTGATTTTGGTGATACTAGCAATTTGGAGGTGCTTGATCAGTTCAATCAT GTCTCGGAATCCCTAAGTGAAGATGAAGATTCATCTTTAGAGTCTGGTGATGACGAGGAT GAAGATCCTGAATGGGAAAATGATGACGATTCAGAGTACTCCAGTCTTGAGGACGATGAA ACAGGATAACAACACTTCATGGTTAATACTATATGAGGAATTGCATTGTATCATGGCCAT GGTCCTTTTGAGCCACAACAAAAATCTTTCTGAGGTTTTTGGATCATAATTTGAGGTCAC AGATCCCAATTACTTGCTTATGGTCATTGATGGAGCCTTTGGATCGCTGGTCGATTCAAA CTGTGGAAGGGGTTTCACATCATGCAATCCATCCAAGCTCAGTTTGTTCCGAAGAAAGAA TGAACTGCCCCAAATCGTACATGGAAGAATTAATTGGAGTGCTTGTCTTCTGGGGTGAAC ATTGTAATGGGTGTACATGTAATTGCTTTGTCAATTGTCCTATCTTCCAGTTTTTGTAAT TACTATGTTGAATTATAGAGCTAAAATTGTCAATGATGTATCACATATCCAAGGGGGAAA TAGAGGCAAACTGAAAAGGTAACATGAATAAGTTAGTTTTCCATTTCTAACTGAGTGGAA GTGAATATTTACGATTCATAGAACAAAAGGGAAACTTTCATGTGGTTCCAAATTTTCGGA ACATTCTTCTTCTTAAAGAGAGGCATTTTTGGGAACATGGCTGCCTGAACAAAGCTTTAT TTACTTTCATATGAGTAACGAGGGGCTAATGAAATCCATGAAGAAGCATCCACTGTTGCA TGAGTCCATGCTTTGCTCAAATCTGTCTGATAACAATGAACATAAATATCGCATATCCAA AAAAAAAAATTGACATCATTGTGTACACCTAGTATGATAAGAGAGAACACCCCCTAAATG AATATCCAACTATACCTTCCACTAAGTCCAGCAAACTGTTCACAAGATGCATCTGCAAAA CCAAAATGTGTCTGGAAATTTTGGATACAAGATTAAGGGAAGGGGCTATACTGTTTCACA ATCTCATAATTGAGGGCATTAGGCTATTCTAATACAGTGACATGATACATATAAGTGACA TTACATAAAAAAGAAAGTGGAGAGCATCCAGGTGGAGAAGATGGGATATATATGCACCAA AGAAGCTCTCCATCGAC