Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g119080.4.1
CDS Infomation

beta-mannosidase enzyme
Sequence

ATGAAAGCAAATCCTCCATGTCTAATTTTGCTTCTGCTAATTTCAGCTACTGTACTTACC
GTACATTCTGACGATGATGATGATGACGTGTCGCCGGAAAATACCATATTAGACACCGGA
GGTTTGAGTAGAGAAAGTTTTCCGAAGGGATTTATATTCGGAACAGCAACTTCAGCCTAC
CAAGTTGAAGGTTCTGCCAGTACTGAAGGCCGTGGACCTAGTATTTGGGACACTTTCCTT
AAAATACCTGGGCTTGAACCAAACAATGCCAATGGAGAAATTGCTGTCGATCAATATCAT
CGATACAAGGAAGATATTGATCTGATGGCGAAGCTGAACTTTGAAGCTTATCGCTTTTCA
ATTTCGTGGTCACGGATCTTCCCAAATGGAACTGGTAAAGTGAACTGGAAGGGAGTTGCT
TATTATAATAGATTGATCGATTATATGCTCAAAAGAGGTATTACCCCATATGCTAATCTG
AATCACTATGATTTACCGCAAGCACTTCAAGATAGGTACAACGGATGGTTGGGCCGTGAA
GTCGTGAAGGATTTTGCTGATTATGCAGAGTTTTGTTTTAAGACATTTGGAGACAGAGTG
AAGAATTGGTTCTCGTTTAATGAGCCAAGAGTGGTTGCTGCCTTGGGGTACGATAACGGA
TTCTTTGCACCTGGAAGATGTTCAAAGCCTTTTGGAAACTGCACAGAAGGGGATTCCGCT
ACTGAGCCTTATATTGTTGCACACAATCTCATCTTATGTCATGCTTCTGCAGCACAGAGA
TACCGTGAAAAGTATCAAGAGAAACAGAAAGGGAAGTTTGGCATTCTATTGGATTTTGTG
TGGTACGAACCTCTAACAAAAGGAAAAGCCGACAACTATGCTGCCCAAAGAGCTAGAGAC
TTTCATTTGGGATGGTTCTTGCATCCTCTTGTATATGGTGAGTACCCAAAAACCATGCAA
AATATTGTGGGAACGCGATTACCCAAGTTCTCGAAAGAAGAAGTTAAGATGGTGAAGGGA
TCATTTGATTATGTGGGCATAAACCAGTACACTTCCTACTACATGTATGACCCTCATTAT
ACCACACCGCAACCCTTGGGCTACCAACAGGACTGGAATGTTGGATTTGCTTATGACCGC
AAGGGAGTACCAATTGGTCCTAGGGCACACTCATATTGGCTCTACATTGTGCCATGGGGT
CTATATAAAGCTATCAACTATGTTAAAGAACACTACGGAAATCCTACCATTATTCTAGCA
GAAAATGGTATGGATTATGCGGGCAACATTACACTTCCAAAAGCTTTACATGACACCAAA
AGGATCAACTACTATAAGAGCTATTTGCAACAACTGAAGAAGACAGTGGATGATGGAGCT
AATGTCATAGGCTACTTCGCGTGGTCATTGCTTGACAACTTCGAATGGAGATTGGGTTAT
ACTTCCAGATTTGGCATTGTCTATGTTGATTTCAATACCCTCAAACGATACCCGAAGATG
TCAGCATATTGGTTCAAGAAATTGCTTAAGCGCCAGAAGCATTAA

Peptide Sequence

PEP ID

Solyc03g119080.4.1
PEP Infomation

beta-mannosidase enzyme
Sequence

MKANPPCLILLLLISATVLTVHSDDDDDDVSPENTILDTGGLSRESFPKGFIFGTATSAY
QVEGSASTEGRGPSIWDTFLKIPGLEPNNANGEIAVDQYHRYKEDIDLMAKLNFEAYRFS
ISWSRIFPNGTGKVNWKGVAYYNRLIDYMLKRGITPYANLNHYDLPQALQDRYNGWLGRE
VVKDFADYAEFCFKTFGDRVKNWFSFNEPRVVAALGYDNGFFAPGRCSKPFGNCTEGDSA
TEPYIVAHNLILCHASAAQRYREKYQEKQKGKFGILLDFVWYEPLTKGKADNYAAQRARD
FHLGWFLHPLVYGEYPKTMQNIVGTRLPKFSKEEVKMVKGSFDYVGINQYTSYYMYDPHY
TTPQPLGYQQDWNVGFAYDRKGVPIGPRAHSYWLYIVPWGLYKAINYVKEHYGNPTIILA
ENGMDYAGNITLPKALHDTKRINYYKSYLQQLKKTVDDGANVIGYFAWSLLDNFEWRLGY
TSRFGIVYVDFNTLKRYPKMSAYWFKKLLKRQKH*

Transcript Sequence

Transcript ID

Solyc03g119080.4.1
Transcript Infomation

beta-mannosidase enzyme
Sequence

TGCCACCATATTCCTTCACATTCCACTCAATTCATTAACTAAAATTAGTAATAATGAAAG
CAAATCCTCCATGTCTAATTTTGCTTCTGCTAATTTCAGCTACTGTACTTACCGTACATT
CTGACGATGATGATGATGACGTGTCGCCGGAAAATACCATATTAGACACCGGAGGTTTGA
GTAGAGAAAGTTTTCCGAAGGGATTTATATTCGGAACAGCAACTTCAGCCTACCAAGTTG
AAGGTTCTGCCAGTACTGAAGGCCGTGGACCTAGTATTTGGGACACTTTCCTTAAAATAC
CTGGGCTTGAACCAAACAATGCCAATGGAGAAATTGCTGTCGATCAATATCATCGATACA
AGGAAGATATTGATCTGATGGCGAAGCTGAACTTTGAAGCTTATCGCTTTTCAATTTCGT
GGTCACGGATCTTCCCAAATGGAACTGGTAAAGTGAACTGGAAGGGAGTTGCTTATTATA
ATAGATTGATCGATTATATGCTCAAAAGAGGTATTACCCCATATGCTAATCTGAATCACT
ATGATTTACCGCAAGCACTTCAAGATAGGTACAACGGATGGTTGGGCCGTGAAGTCGTGA
AGGATTTTGCTGATTATGCAGAGTTTTGTTTTAAGACATTTGGAGACAGAGTGAAGAATT
GGTTCTCGTTTAATGAGCCAAGAGTGGTTGCTGCCTTGGGGTACGATAACGGATTCTTTG
CACCTGGAAGATGTTCAAAGCCTTTTGGAAACTGCACAGAAGGGGATTCCGCTACTGAGC
CTTATATTGTTGCACACAATCTCATCTTATGTCATGCTTCTGCAGCACAGAGATACCGTG
AAAAGTATCAAGAGAAACAGAAAGGGAAGTTTGGCATTCTATTGGATTTTGTGTGGTACG
AACCTCTAACAAAAGGAAAAGCCGACAACTATGCTGCCCAAAGAGCTAGAGACTTTCATT
TGGGATGGTTCTTGCATCCTCTTGTATATGGTGAGTACCCAAAAACCATGCAAAATATTG
TGGGAACGCGATTACCCAAGTTCTCGAAAGAAGAAGTTAAGATGGTGAAGGGATCATTTG
ATTATGTGGGCATAAACCAGTACACTTCCTACTACATGTATGACCCTCATTATACCACAC
CGCAACCCTTGGGCTACCAACAGGACTGGAATGTTGGATTTGCTTATGACCGCAAGGGAG
TACCAATTGGTCCTAGGGCACACTCATATTGGCTCTACATTGTGCCATGGGGTCTATATA
AAGCTATCAACTATGTTAAAGAACACTACGGAAATCCTACCATTATTCTAGCAGAAAATG
GTATGGATTATGCGGGCAACATTACACTTCCAAAAGCTTTACATGACACCAAAAGGATCA
ACTACTATAAGAGCTATTTGCAACAACTGAAGAAGACAGTGGATGATGGAGCTAATGTCA
TAGGCTACTTCGCGTGGTCATTGCTTGACAACTTCGAATGGAGATTGGGTTATACTTCCA
GATTTGGCATTGTCTATGTTGATTTCAATACCCTCAAACGATACCCGAAGATGTCAGCAT
ATTGGTTCAAGAAATTGCTTAAGCGCCAGAAGCATTAAGGCTGCTCTTGCCCTTGTCTGT
AGTTCCATGTTTATTTTGATTTTAGAGAACTTGATACTCATACCTTGAGTGACTTTAATG
TTCGAAAAACACAATAAGTTAAGTTCCTTAGGCTCTAGGATTTCCACTTATAATAGTTTG
ATATAAAATTGTTCTTTCTGTAATTTAGCACATC