Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc03g118920.3.1
CDS Infomation	ATP-dependent RNA helicase, putative (AHRD V3.3 *** B9S355_RICCO)
Sequence	ATGCCTTACACTAATCTTATTCAGAACTGCCTCAAGGTGAGGCTTAAAGCCAATCAATTT CTATCCACTATGTCCACTTCTCTTCAATTTTGTCCAAATCGTTTTCACTTTGAAACAAAC CCTCTTCTGTACCGCTCGTCACAGTCAGTAATACCTCAAAAACGATGCCTTCATGGAAGT GTTGGATTCTTTTGTTCAGCTAAGGGGTCTTCTTCTTCTTCGTCGTCTGTTGTGTTGAGG CGGAAAAGACATGGTTCATCTTCGTCTTCTTCTTATCCTTCTCCGTATTTTTATCAGCAG AATTTGGGGTATGGAAGATTTGCGTACGATGAGTGTGAGTCTGAGTCGGAGTCTGATCGT GAAACTCAGTCGTCTAAGCAATTGGGTGAATCAACCCTTCATAACATTGAAGAATGGAGG TGGAAGTTAAGCATGCTAATGCGCAAAAAGGATGACCAAGAAGTGGTCTCAACGGATAAA AAGGATCGACGTGATTTTGAGCATATATCAGCTATGGCAACTAGAATGGGTTTACACTGT CGCCAGTATGAAAAAACAATTGTGTGTAGCAAAGTTCCATTGCCAAATTATAGGCCAGAT TTGGATGTTAAGCGTCCACAAAGAGAGGTAGTATTACATTATGGATTACAAAGTAGGGTA GGTGATCTTCTTGAAGCACATCTTTCTAAAAAGTCAGTAAACAAGGGAAACCTGACACAT AATGCTTTCTTGAGAGGAAGCAATGACAACAGTTCTCCCAATGATAAAGAGCTTCATGAG AATGAGAAGCCATTTGCACGAAATGTTGTAGCAGAGAGGATTCTCAGGCGAAGGAGCTTG GAGATGCGTAGTAAACAAGAAGATTGGCAGGGATCTCCTGAAGGCCAGAAGATGCTAGAA CTTCGAAGAAATCTCCCTGCATATAAAGAGAGAGAGGCATTGCTTAGAGCCATTTCTGAG AATCAGGTGGTGGTTGTGTCTGGGGAAACTGGATGTGGTAAAACTACCCAATTGCCTCAG TACATTTTAGAAGCTGAGATAGAAGCTGCTCGCGGAGCTACTTGCAATATCATTTGTACT CAACCAAGGCGAATATCTGCTATGTCTGTTGCTGAAAGAGTTGCTGCAGAGCGTGGGGAG AATCTGGGAGAATCTGTGGGCTATAAGGTTCGGCTTGAGGGCATGAGAGGGAGGGATACC CGCCTCTTATTTTGCACAACTGGTATTCTTCTGAGGAGATTACTGGTTGATAGAAAGTTG GAAGGTGTCACTCACGTTATTGTAGACGAGATTCATGAACGCGGAATGAATGAAGATTTC CTTTTAATTGTCCTTAAAGATCTCCTTCCCCGTCGACCTGAATTGAAGCTGATTTTGATG AGTGCTACTCTTAATGCCGAGCTCTTCTCTTCCTATTATGGTGGCGCCCCAATGATCCAT ATTCCTGGTTTTACTTATCCCGTTAGAAGTCATTTTCTGGAAAATATTTTGGAAATGACT AGATACCGGTTAACTCCATATAATCAAATTGATAACTATGGTCAAGACAAGATGTGGAAA ATGCAGAAACAGACTATTAGGAAGAGGAAGACCCAAATTGCTTCAGCTGTTGAGGAATCA CTAGAATCAGCTGATTTTGGGCAGTATAATCCTCTGACTAGGGATTCACTATCCTGTTGG AATCCTGATTCAATTGGCTTCAACCTTATTGAGCATGTGCTTTGTCACATATGTAGAAAT GAAAGACCTGGTGCTGTGTTGGTTTTTATGACTGGTTGGGATGACATTAATACTGTGAAG GACCAGCTGCAGGCTCATCCGCTGTTGGGGGATCCAAGCAGAGTTTTGCTGCTTGCATGT CATGGTTCCATGGCCAGTGCAGAGCAGAAATTGATTTTTGATAAGCCAGAGGATGGAATC AGGAAAATTGTGTTAGCTACCAACATGGCTGAAACAAGTATCACCATAAATGACGTGGTT TTTGTGGTCGACTGTGGAAAGGCAAAAGAGACATCTTATGATGCAATTAACAACACTCCC TGTTTGCTTCCTTCTTGGATTTCAAAAGCTTCCGCTCGGCAAAGAAAAGGAAGAGCTGGC CGTGTTCAGCCTGGCGAGTGTTATCATCTATATCCCAGATGTGTATATGAAGCTTTTGCA GACTATCAACTGCCAGAGCTTCTGAGAACACCTTTACAGTCCCTATGCCTGCAGATTAAA AGCTTACAACTTGGAAGTATTTCAGACTTTCTATCCAAGGCAATCCAGTCGCCAGAACCA CTATCTGTTCAGAATGCTATTGAGTATTTGAAGACAATAGGGGCTCTAGATGAGGATGAA AATCTGACAGTACTTGGACACAACCTATCAATGCTTCCAGTTGAGCCAAAACTGGGGAAA ATGATAATATTAGGTGTAGTATTCAACTGCCTGGATCCAGTTCTGACAGTTGTTGCTGGT TTAAGTGCTAGAGATCCATTTTTAATGCCATTTGACAAGAAGGATCTTGCTGAGTCTGCC AAAGCCCAGTTTTCTGCTCGTGACTTCAGTGATCACCTTGCTCTTGTTCGGGCTTATGAT GGCTGGAAAGATGCTGAAAGGCAGCAATCTGGTTATGATTACTGTTGGAGAAATTTCCTT TCTGCACAAACTCTCAAAGCGATGGACTCCCTTCGAAAGCAATTTTTGTATCTGCTTAAG GACATTGGTTTAGTTGATAGCATTCAGAGTTGTAATGCCTGGAGTAACAATGAACATCTG GTTCGAGCGATTGTATGTGGTGGACTATTCCCTGGCATATGCTCTGTTGTGAACAAGGAA AAGTCAATCTCATTGAAAACCATGGAGGATGGTGGAGTCCTTTTATACTCTAATTCTGTC AACGCTCAAGAACCTCAAATTCCATACCCATGGCTTGTCTTCAACGAAAAAGTTAAAGTG AATGCAGTATTCCTGCGTGATTCTACAGCCGTATCTGATTCTGTGGTACTCTTATTTGGT GGAAGCATTTCCGGAAAAGCTTTAGATGGACACTTGATGATGCTTGGAGGATACTTGGAG TTTTTCATGAACCCCTCACTGGCAAATACTTACATAAGCTTGAAGAGGGAGCTTAATGAA CTTGTCCATAAGAAACTCTCGGACCGTAATTTTGATGTAGGAAGTCATGGGGAGCTATTA GAAGCTGTTAAATTGCTGGTGTCAGAGGATCAATGTGAAGGTAAATTTGTCTATGGTCGT AAACCGTCCCCCAAGAAGTCTGCAAAGGAGTTACAGAAAAATGTCATTTCAAAGAAGGGC AGTGGTGGTGAGAATCCGAAGTCTCATCTCCAAACGTTGCTTGCTCGGGCTGGCCACCAA TCACCCAGTTATAAGATAACACAGCTAAAAAACAATAAGTTCCGCGCCACTGTAATATTC AATGGTTTAAATTTTTCTGGCCAGCCTAGCAGTAGCAAGAAGGATGCTGAAAAAGATGCA GCTGCTGAAGCTCTACAGTGGTTTACTGGTGAGACCCAATCCTCTTCTAAAGCTGTTGAA CACATGTCAGCACTTCTGAAGAAAAGCAAGAGTAAAAATCAACTTCATAGTACAAAATGG AGGTAA

Peptide Sequence

PEP ID	Solyc03g118920.3.1
PEP Infomation	ATP-dependent RNA helicase, putative (AHRD V3.3 *** B9S355_RICCO)
Sequence	MPYTNLIQNCLKVRLKANQFLSTMSTSLQFCPNRFHFETNPLLYRSSQSVIPQKRCLHGS VGFFCSAKGSSSSSSSVVLRRKRHGSSSSSSYPSPYFYQQNLGYGRFAYDECESESESDR ETQSSKQLGESTLHNIEEWRWKLSMLMRKKDDQEVVSTDKKDRRDFEHISAMATRMGLHC RQYEKTIVCSKVPLPNYRPDLDVKRPQREVVLHYGLQSRVGDLLEAHLSKKSVNKGNLTH NAFLRGSNDNSSPNDKELHENEKPFARNVVAERILRRRSLEMRSKQEDWQGSPEGQKMLE LRRNLPAYKEREALLRAISENQVVVVSGETGCGKTTQLPQYILEAEIEAARGATCNIICT QPRRISAMSVAERVAAERGENLGESVGYKVRLEGMRGRDTRLLFCTTGILLRRLLVDRKL EGVTHVIVDEIHERGMNEDFLLIVLKDLLPRRPELKLILMSATLNAELFSSYYGGAPMIH IPGFTYPVRSHFLENILEMTRYRLTPYNQIDNYGQDKMWKMQKQTIRKRKTQIASAVEES LESADFGQYNPLTRDSLSCWNPDSIGFNLIEHVLCHICRNERPGAVLVFMTGWDDINTVK DQLQAHPLLGDPSRVLLLACHGSMASAEQKLIFDKPEDGIRKIVLATNMAETSITINDVV FVVDCGKAKETSYDAINNTPCLLPSWISKASARQRKGRAGRVQPGECYHLYPRCVYEAFA DYQLPELLRTPLQSLCLQIKSLQLGSISDFLSKAIQSPEPLSVQNAIEYLKTIGALDEDE NLTVLGHNLSMLPVEPKLGKMIILGVVFNCLDPVLTVVAGLSARDPFLMPFDKKDLAESA KAQFSARDFSDHLALVRAYDGWKDAERQQSGYDYCWRNFLSAQTLKAMDSLRKQFLYLLK DIGLVDSIQSCNAWSNNEHLVRAIVCGGLFPGICSVVNKEKSISLKTMEDGGVLLYSNSV NAQEPQIPYPWLVFNEKVKVNAVFLRDSTAVSDSVVLLFGGSISGKALDGHLMMLGGYLE FFMNPSLANTYISLKRELNELVHKKLSDRNFDVGSHGELLEAVKLLVSEDQCEGKFVYGR KPSPKKSAKELQKNVISKKGSGGENPKSHLQTLLARAGHQSPSYKITQLKNNKFRATVIF NGLNFSGQPSSSKKDAEKDAAAEALQWFTGETQSSSKAVEHMSALLKKSKSKNQLHSTKW R*

Transcript Sequence

Transcript ID	Solyc03g118920.3.1
Transcript Infomation	ATP-dependent RNA helicase, putative (AHRD V3.3 *** B9S355_RICCO)
Sequence	TCCAAATAGTGCGCTAAATAGTGATCCTAAAAAATCTCAATTATAGAAGACTCACCAAAT CCTAAACCCCTATAGAAAGCTCGGAGGTGAAGCGACATATATTTTTTCTTCAGGGACCAA ACCGGCAATTATAATCAGCGAGAAGAAAAACACTTGTCTCGGCCAACGCTGCTCAGTTGA TGAAGCTCTCCGTTTGTGTGACTGTTATGCAAACACCTCTTATTCATTCTTCATTTTCTT CTTCTTCCTAAAACCCTAACCACAAATCTTCAAACGAATGTTTTCTTGAAACTTAAAATC TTTAGGCATCCATGCCTTACACTAATCTTATTCAGAACTGCCTCAAGGTGAGGCTTAAAG CCAATCAATTTCTATCCACTATGTCCACTTCTCTTCAATTTTGTCCAAATCGTTTTCACT TTGAAACAAACCCTCTTCTGTACCGCTCGTCACAGTCAGTAATACCTCAAAAACGATGCC TTCATGGAAGTGTTGGATTCTTTTGTTCAGCTAAGGGGTCTTCTTCTTCTTCGTCGTCTG TTGTGTTGAGGCGGAAAAGACATGGTTCATCTTCGTCTTCTTCTTATCCTTCTCCGTATT TTTATCAGCAGAATTTGGGGTATGGAAGATTTGCGTACGATGAGTGTGAGTCTGAGTCGG AGTCTGATCGTGAAACTCAGTCGTCTAAGCAATTGGGTGAATCAACCCTTCATAACATTG AAGAATGGAGGTGGAAGTTAAGCATGCTAATGCGCAAAAAGGATGACCAAGAAGTGGTCT CAACGGATAAAAAGGATCGACGTGATTTTGAGCATATATCAGCTATGGCAACTAGAATGG GTTTACACTGTCGCCAGTATGAAAAAACAATTGTGTGTAGCAAAGTTCCATTGCCAAATT ATAGGCCAGATTTGGATGTTAAGCGTCCACAAAGAGAGGTAGTATTACATTATGGATTAC AAAGTAGGGTAGGTGATCTTCTTGAAGCACATCTTTCTAAAAAGTCAGTAAACAAGGGAA ACCTGACACATAATGCTTTCTTGAGAGGAAGCAATGACAACAGTTCTCCCAATGATAAAG AGCTTCATGAGAATGAGAAGCCATTTGCACGAAATGTTGTAGCAGAGAGGATTCTCAGGC GAAGGAGCTTGGAGATGCGTAGTAAACAAGAAGATTGGCAGGGATCTCCTGAAGGCCAGA AGATGCTAGAACTTCGAAGAAATCTCCCTGCATATAAAGAGAGAGAGGCATTGCTTAGAG CCATTTCTGAGAATCAGGTGGTGGTTGTGTCTGGGGAAACTGGATGTGGTAAAACTACCC AATTGCCTCAGTACATTTTAGAAGCTGAGATAGAAGCTGCTCGCGGAGCTACTTGCAATA TCATTTGTACTCAACCAAGGCGAATATCTGCTATGTCTGTTGCTGAAAGAGTTGCTGCAG AGCGTGGGGAGAATCTGGGAGAATCTGTGGGCTATAAGGTTCGGCTTGAGGGCATGAGAG GGAGGGATACCCGCCTCTTATTTTGCACAACTGGTATTCTTCTGAGGAGATTACTGGTTG ATAGAAAGTTGGAAGGTGTCACTCACGTTATTGTAGACGAGATTCATGAACGCGGAATGA ATGAAGATTTCCTTTTAATTGTCCTTAAAGATCTCCTTCCCCGTCGACCTGAATTGAAGC TGATTTTGATGAGTGCTACTCTTAATGCCGAGCTCTTCTCTTCCTATTATGGTGGCGCCC CAATGATCCATATTCCTGGTTTTACTTATCCCGTTAGAAGTCATTTTCTGGAAAATATTT TGGAAATGACTAGATACCGGTTAACTCCATATAATCAAATTGATAACTATGGTCAAGACA AGATGTGGAAAATGCAGAAACAGACTATTAGGAAGAGGAAGACCCAAATTGCTTCAGCTG TTGAGGAATCACTAGAATCAGCTGATTTTGGGCAGTATAATCCTCTGACTAGGGATTCAC TATCCTGTTGGAATCCTGATTCAATTGGCTTCAACCTTATTGAGCATGTGCTTTGTCACA TATGTAGAAATGAAAGACCTGGTGCTGTGTTGGTTTTTATGACTGGTTGGGATGACATTA ATACTGTGAAGGACCAGCTGCAGGCTCATCCGCTGTTGGGGGATCCAAGCAGAGTTTTGC TGCTTGCATGTCATGGTTCCATGGCCAGTGCAGAGCAGAAATTGATTTTTGATAAGCCAG AGGATGGAATCAGGAAAATTGTGTTAGCTACCAACATGGCTGAAACAAGTATCACCATAA ATGACGTGGTTTTTGTGGTCGACTGTGGAAAGGCAAAAGAGACATCTTATGATGCAATTA ACAACACTCCCTGTTTGCTTCCTTCTTGGATTTCAAAAGCTTCCGCTCGGCAAAGAAAAG GAAGAGCTGGCCGTGTTCAGCCTGGCGAGTGTTATCATCTATATCCCAGATGTGTATATG AAGCTTTTGCAGACTATCAACTGCCAGAGCTTCTGAGAACACCTTTACAGTCCCTATGCC TGCAGATTAAAAGCTTACAACTTGGAAGTATTTCAGACTTTCTATCCAAGGCAATCCAGT CGCCAGAACCACTATCTGTTCAGAATGCTATTGAGTATTTGAAGACAATAGGGGCTCTAG ATGAGGATGAAAATCTGACAGTACTTGGACACAACCTATCAATGCTTCCAGTTGAGCCAA AACTGGGGAAAATGATAATATTAGGTGTAGTATTCAACTGCCTGGATCCAGTTCTGACAG TTGTTGCTGGTTTAAGTGCTAGAGATCCATTTTTAATGCCATTTGACAAGAAGGATCTTG CTGAGTCTGCCAAAGCCCAGTTTTCTGCTCGTGACTTCAGTGATCACCTTGCTCTTGTTC GGGCTTATGATGGCTGGAAAGATGCTGAAAGGCAGCAATCTGGTTATGATTACTGTTGGA GAAATTTCCTTTCTGCACAAACTCTCAAAGCGATGGACTCCCTTCGAAAGCAATTTTTGT ATCTGCTTAAGGACATTGGTTTAGTTGATAGCATTCAGAGTTGTAATGCCTGGAGTAACA ATGAACATCTGGTTCGAGCGATTGTATGTGGTGGACTATTCCCTGGCATATGCTCTGTTG TGAACAAGGAAAAGTCAATCTCATTGAAAACCATGGAGGATGGTGGAGTCCTTTTATACT CTAATTCTGTCAACGCTCAAGAACCTCAAATTCCATACCCATGGCTTGTCTTCAACGAAA AAGTTAAAGTGAATGCAGTATTCCTGCGTGATTCTACAGCCGTATCTGATTCTGTGGTAC TCTTATTTGGTGGAAGCATTTCCGGAAAAGCTTTAGATGGACACTTGATGATGCTTGGAG GATACTTGGAGTTTTTCATGAACCCCTCACTGGCAAATACTTACATAAGCTTGAAGAGGG AGCTTAATGAACTTGTCCATAAGAAACTCTCGGACCGTAATTTTGATGTAGGAAGTCATG GGGAGCTATTAGAAGCTGTTAAATTGCTGGTGTCAGAGGATCAATGTGAAGGTAAATTTG TCTATGGTCGTAAACCGTCCCCCAAGAAGTCTGCAAAGGAGTTACAGAAAAATGTCATTT CAAAGAAGGGCAGTGGTGGTGAGAATCCGAAGTCTCATCTCCAAACGTTGCTTGCTCGGG CTGGCCACCAATCACCCAGTTATAAGATAACACAGCTAAAAAACAATAAGTTCCGCGCCA CTGTAATATTCAATGGTTTAAATTTTTCTGGCCAGCCTAGCAGTAGCAAGAAGGATGCTG AAAAAGATGCAGCTGCTGAAGCTCTACAGTGGTTTACTGGTGAGACCCAATCCTCTTCTA AAGCTGTTGAACACATGTCAGCACTTCTGAAGAAAAGCAAGAGTAAAAATCAACTTCATA GTACAAAATGGAGGTAATTTTTGCATAAGTTAGGGTAGCTAACCCAACAGTCCCGCGGAT AAAGAGGTTCTCGCTGGCATTAATTTTCTTGGTTGAAAAAGGATGGTGTGATTTTTGGCG AAGAAGATGTAGCTTGAAGGTTTGTATATAACGAGTCTTATTGGACCTTCATTTTTTAAG AGGGTTGCAGACAATCTCGAGGGAGCTACTGTAGTTGAGGTTGCCATTGTGGGAGGAACT AATCATTGCGGTATCTTCCTATGTGGTGACCTAGGTTAAAGTTCACTACGCTCTGGTGCC ATGATGTCTATATGCTGTCCCAAAGGCTAGTCAAATTCTCAAGCAAGAGTTTGGCTCAGC CGATCAATTCTTTCACTGAGAAGTGGACTGCCGCCTAGTTTGGATGGGCATATGTGCAAT GACCTGAACGGTCAGCTCGGCCTCGGTATTACACTAATTTTTATACCTTGTATGAGTTTT GCTTCTAATTCATTATTACTTATGAGAAAGGATCTGTAGGAGGAAAATGGAGAGTTGTAC ACCAAATACAAAGTTGTATTAGAGACTCGTGAATGATCATGATCATGATGTATTATAGAC TTGAAGTCTAAGAGTGTATTTTTCCTTTAAATTTTTCACAATGATTACATAAAAATGGCG CCTTCCAGTTTCTCCGAGACTTTCACTT