Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc03g118860.3.1
CDS Infomation	UDP-N-acetylglucosamine--N-acetylmuramyl-(Pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase, putative (AHRD V3.3 *** B9SFW3_RICCO)
Sequence	ATGTTAACAGCCATTTATTTACCCTCTTCCCCGAGCTGCCGGTACTTTAACACCCAATTC TCCGTTCCCAAATCCTTAACGTTGGCCCTCTCCATTCAACTTCAATCTAGGAATCTAAAG ATCAGTAACTGTCTCTCTCTCAACAAACCCAACAATCAAAGCACCAATGCTTCCGGAGAA ACAGCTGCTGGAAGTGACACCCTTCGAATCATATTGGCTGCAGGGGGGACCGGTGGCCAT ATTTACCCGGCGATTGCCATTGCTGACGACCTTAATGTCCTTGACCCTAATGCCCAAATT CTCTTTGTTGGACTTCAAACGGGAATGGAAAGCACTGCAGTGCCAACAGCAGGATACTCC TTTGAACCGATTCCTGCTGCACCATTAGGCCGGCCCTTTTTCTCTCTCTACAACTTATTC GTCCTCCCTTTTGTACTCGTCAAATCCCTAATTAAAAGTTCCCAAATACTTAAAGAATTC AAACCCCATATAGTAATTGGAACTGGGGGGTTTGTTTCATTTCCAATTTGCTTAGCTGCA AGTCTCAAAGGCATTAAACTTGCAATTCAAGAACAAAATTCAGTACCTGGAATCGCTAAT AGGGTGCTTTCTTTATTTGCATATAATGTGTTTGTTGCATTTAATTCTAGTGTTGATTGG TTTTGGCAAAAGAACAAATGCGTGGTGTGCGGAAATCCAGTGAGATTGTCTTTGAGGCAA TATGCGTCTAAGGCCGTGGGAAGGCGTCATTTCTTTTCAAATGCAGTTGTAGGGAAGGGA GATGGTAAGGTGGTATTGATTCTTGGAGGCTCATTGGGTGCTAATGCACTTAATGTTGCC ATTTTGCATTTGTATTCTGAGATGTTAAACGAAAGGAAAGACTTGTTTTTGATATGGCAA ACCGGGGTCTTAGCATATGATGAGATGGAGAGCCTCGTGAAATTCCATCCCCGATTATAC ATTACCCCGTTCTTGCACTCCATGGATTTAGCGTATGCAGCTGCAGACCTTGTTGTATCT AGAGCTGGAGCAATGATCTGCACTGAGATCTTAACTGCTGGGAAACCTAGTGTTCTGATA CCTTCGCCGAATGTGGCTGAAGGACATCAATTTCACAATGCTTGTCTAATGGCTGATTTG GTTGGTTCAAGGGTTATAACTGAAGATGAACTTGACTCTCTTACTCTTAAAAGTTCTATT GAAGAAATTTTAGATGATGAGAGATTGATGACGGAGATGTCTGAGAGAGCTCTCAAGACT GCAAAGCCAAATGCATCTGTTGAAATTGCTAAACACCTTCTTACTCTTGTGAACTCGTCG ATCAAATTCTGA

Peptide Sequence

PEP ID	Solyc03g118860.3.1
PEP Infomation	UDP-N-acetylglucosamine--N-acetylmuramyl-(Pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase, putative (AHRD V3.3 *** B9SFW3_RICCO)
Sequence	MLTAIYLPSSPSCRYFNTQFSVPKSLTLALSIQLQSRNLKISNCLSLNKPNNQSTNASGE TAAGSDTLRIILAAGGTGGHIYPAIAIADDLNVLDPNAQILFVGLQTGMESTAVPTAGYS FEPIPAAPLGRPFFSLYNLFVLPFVLVKSLIKSSQILKEFKPHIVIGTGGFVSFPICLAA SLKGIKLAIQEQNSVPGIANRVLSLFAYNVFVAFNSSVDWFWQKNKCVVCGNPVRLSLRQ YASKAVGRRHFFSNAVVGKGDGKVVLILGGSLGANALNVAILHLYSEMLNERKDLFLIWQ TGVLAYDEMESLVKFHPRLYITPFLHSMDLAYAAADLVVSRAGAMICTEILTAGKPSVLI PSPNVAEGHQFHNACLMADLVGSRVITEDELDSLTLKSSIEEILDDERLMTEMSERALKT AKPNASVEIAKHLLTLVNSSIKF*

Transcript Sequence

Transcript ID	Solyc03g118860.3.1
Transcript Infomation	UDP-N-acetylglucosamine--N-acetylmuramyl-(Pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase, putative (AHRD V3.3 *** B9SFW3_RICCO)
Sequence	ATGTTAACAGCCATTTATTTACCCTCTTCCCCGAGCTGCCGGTACTTTAACACCCAATTC TCCGTTCCCAAATCCTTAACGTTGGCCCTCTCCATTCAACTTCAATCTAGGAATCTAAAG ATCAGTAACTGTCTCTCTCTCAACAAACCCAACAATCAAAGCACCAATGCTTCCGGAGAA ACAGCTGCTGGAAGTGACACCCTTCGAATCATATTGGCTGCAGGGGGGACCGGTGGCCAT ATTTACCCGGCGATTGCCATTGCTGACGACCTTAATGTCCTTGACCCTAATGCCCAAATT CTCTTTGTTGGACTTCAAACGGGAATGGAAAGCACTGCAGTGCCAACAGCAGGATACTCC TTTGAACCGATTCCTGCTGCACCATTAGGCCGGCCCTTTTTCTCTCTCTACAACTTATTC GTCCTCCCTTTTGTACTCGTCAAATCCCTAATTAAAAGTTCCCAAATACTTAAAGAATTC AAACCCCATATAGTAATTGGAACTGGGGGGTTTGTTTCATTTCCAATTTGCTTAGCTGCA AGTCTCAAAGGCATTAAACTTGCAATTCAAGAACAAAATTCAGTACCTGGAATCGCTAAT AGGGTGCTTTCTTTATTTGCATATAATGTGTTTGTTGCATTTAATTCTAGTGTTGATTGG TTTTGGCAAAAGAACAAATGCGTGGTGTGCGGAAATCCAGTGAGATTGTCTTTGAGGCAA TATGCGTCTAAGGCCGTGGGAAGGCGTCATTTCTTTTCAAATGCAGTTGTAGGGAAGGGA GATGGTAAGGTGGTATTGATTCTTGGAGGCTCATTGGGTGCTAATGCACTTAATGTTGCC ATTTTGCATTTGTATTCTGAGATGTTAAACGAAAGGAAAGACTTGTTTTTGATATGGCAA ACCGGGGTCTTAGCATATGATGAGATGGAGAGCCTCGTGAAATTCCATCCCCGATTATAC ATTACCCCGTTCTTGCACTCCATGGATTTAGCGTATGCAGCTGCAGACCTTGTTGTATCT AGAGCTGGAGCAATGATCTGCACTGAGATCTTAACTGCTGGGAAACCTAGTGTTCTGATA CCTTCGCCGAATGTGGCTGAAGGACATCAATTTCACAATGCTTGTCTAATGGCTGATTTG GTTGGTTCAAGGGTTATAACTGAAGATGAACTTGACTCTCTTACTCTTAAAAGTTCTATT GAAGAAATTTTAGATGATGAGAGATTGATGACGGAGATGTCTGAGAGAGCTCTCAAGACT GCAAAGCCAAATGCATCTGTTGAAATTGCTAAACACCTTCTTACTCTTGTGAACTCGTCG ATCAAATTCTGAATAATGCTTGCATTGATATACGTTCAGTTCAAAGATTAGAATCTTAGC TGCGAGCTTCATTTGATATATTTATTAATTTGTCCCCCTCCTTGCGTATCAATCACAACG ACACTCTTAAAAGAAAATTCTCAATTTTGTATATACAAATGAGATATTTTACTGGACATA ATTTTTTTTGAATATGACAATAGTTCTGCATTTGCAATTTTATATCTATCTCCTCC