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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g118540.3.1
CDS Infomation

Jasmonate ZIM-domain protein 7b (AHRD V3.3 *** T1WMB9_TOBAC)
Sequence

ATGGAGAGAGATTTCATGGGGTTGACTGTGAAGCAAGAAGTTCTTGAAGAACCTATAGAT
CCAGCACCTTTAAGAAGTTCAGCAATGCAGTGGTCATTCACGAACAACGTCACTGCTCAT
CCTCAATACCTTTCTTTCAAGAGTGCTCCAGAGGATAAACCGAAAATTGGTTTTGATTCT
CTTGCATCAACTGGATTGGTGACTATAACCACAACTGAAGCTGTTGACTCGAGTCATCGG
ACATACTCTGATGTCACACAGAAAAATATGATGCTTGAAAGACAAGGTGGAACACATTAC
ACAACGACAACTTTCTCTCCTCATCACTATGATGCACACTCTATGCATCGATCTCACGGA
GTCAGAGTGCTCCCACTTGCGAGCCCAACTAATCAGATTTCTGTATCTATGACTATGCCT
GGTCATAAGTCTTTTATTTCTCCTGTTGGACAGAATCTGATAACTACTGTAAATCAACTC
CCTGGTGCTGGAGCTCTGGTTGTTAGCCCCATTTCAGCTGTTCCGTCTAGCAGCATTGTC
GTGGGCACCACTGATTTAAGGGGTGCTCCCAAAACTCCCCCAGGTCCTGCCCAGTTGACC
ATCTTTTATGGTGGTTCTGTCTGTGTGTATGACAATGTTTCACCGGAAAAGGCTCAAGCT
ATTATGTTACTTGCTGGAAATGCACCACCTGTTACACCAAATGCAACATCTACTCTATCT
CCAGTTCAGGCACCTATACCTAAGTCCTCGGCCATAGACTCTTTTGTTGTAAATCAGTGC
CGTAATACAACACCTACACTTGCCAGCCCCATTTCTATAACATCCCATGGTGGCGCGCAA
GCTGCCAGAGTGTCTACTACTACAAATGGAGTAACTATTATCAAATCAATAGGAGTTCTT
CCATCTCCTTCTCTTAAAGCCGAGCCTTCCAAAGTTACCAGTTCTGTAGGATCTTTTCCT
GCCTCCCTCGTTCCATCAGCTGTGCCTCAGGCGCGCAAGGCATCATTGGCTCGATTCTTG
GAGAAGCGCAAGGAAAGGGTAATAAGTGCATCACCTTATCCTCTCAACAGCAAGCAATCC
CCAGAATGTAGCACTCCTGAACTTGGAAGTAGAAGCCTCTCTATGAATTCTTCAGGCTCT
TGTCCTCCCCACATAATCAGTTTGGTCAAGTAG

Peptide Sequence

PEP ID

Solyc03g118540.3.1
PEP Infomation

Jasmonate ZIM-domain protein 7b (AHRD V3.3 *** T1WMB9_TOBAC)
Sequence

MERDFMGLTVKQEVLEEPIDPAPLRSSAMQWSFTNNVTAHPQYLSFKSAPEDKPKIGFDS
LASTGLVTITTTEAVDSSHRTYSDVTQKNMMLERQGGTHYTTTTFSPHHYDAHSMHRSHG
VRVLPLASPTNQISVSMTMPGHKSFISPVGQNLITTVNQLPGAGALVVSPISAVPSSSIV
VGTTDLRGAPKTPPGPAQLTIFYGGSVCVYDNVSPEKAQAIMLLAGNAPPVTPNATSTLS
PVQAPIPKSSAIDSFVVNQCRNTTPTLASPISITSHGGAQAARVSTTTNGVTIIKSIGVL
PSPSLKAEPSKVTSSVGSFPASLVPSAVPQARKASLARFLEKRKERVISASPYPLNSKQS
PECSTPELGSRSLSMNSSGSCPPHIISLVK*

Transcript Sequence

Transcript ID

Solyc03g118540.3.1
Transcript Infomation

Jasmonate ZIM-domain protein 7b (AHRD V3.3 *** T1WMB9_TOBAC)
Sequence

ATTCAATCAATTATTTTGACATATGCTATTAAACCTATTTTTTCTTTTTTTCACAAAATT
TCTCGATGCTAATAAAATTAATTAATAATTTTATTTAAATCTCTCAAGCATTTGGTAAAA
TAAAAAATATTAATTAATATAATAATCGAACTATAAAACATAAAGACATATAAATTATAT
AATAATAAATATATAATAATAAAAATCAAAGATTTAAAACCATTGAAATAATACAACAAC
TATTAATAACGTTCAATCTACATGTGAATTTAACTTTGATATAAAGTGAGGGTAATCTCG
AAGGAATCAACGGGGGTGATGTTATCTGATAAATAAAAAACAAAGGTGTGACTTCATTTA
AAACCTTACTTATTCTATTTCCCTCACATTTCTCCTTTCACAATAAACAAACAAACAAGT
TTCTGAAGCAGAGAGAGAATACAAAAAAAAAAAAACAGAGCTATATATCTCTTTGCTACT
ACAATTAACAATCTTCTCAAATTCCTCAAGTTCAAACTGAAGAGAAATGGAGAGAGATTT
CATGGGGTTGACTGTGAAGCAAGAAGTTCTTGAAGAACCTATAGATCCAGCACCTTTAAG
AAGTTCAGCAATGCAGTGGTCATTCACGAACAACGTCACTGCTCATCCTCAATACCTTTC
TTTCAAGAGTGCTCCAGAGGATAAACCGAAAATTGGTTTTGATTCTCTTGCATCAACTGG
ATTGGTGACTATAACCACAACTGAAGCTGTTGACTCGAGTCATCGGACATACTCTGATGT
CACACAGAAAAATATGATGCTTGAAAGACAAGGTGGAACACATTACACAACGACAACTTT
CTCTCCTCATCACTATGATGCACACTCTATGCATCGATCTCACGGAGTCAGAGTGCTCCC
ACTTGCGAGCCCAACTAATCAGATTTCTGTATCTATGACTATGCCTGGTCATAAGTCTTT
TATTTCTCCTGTTGGACAGAATCTGATAACTACTGTAAATCAACTCCCTGGTGCTGGAGC
TCTGGTTGTTAGCCCCATTTCAGCTGTTCCGTCTAGCAGCATTGTCGTGGGCACCACTGA
TTTAAGGGGTGCTCCCAAAACTCCCCCAGGTCCTGCCCAGTTGACCATCTTTTATGGTGG
TTCTGTCTGTGTGTATGACAATGTTTCACCGGAAAAGGCTCAAGCTATTATGTTACTTGC
TGGAAATGCACCACCTGTTACACCAAATGCAACATCTACTCTATCTCCAGTTCAGGCACC
TATACCTAAGTCCTCGGCCATAGACTCTTTTGTTGTAAATCAGTGCCGTAATACAACACC
TACACTTGCCAGCCCCATTTCTATAACATCCCATGGTGGCGCGCAAGCTGCCAGAGTGTC
TACTACTACAAATGGAGTAACTATTATCAAATCAATAGGAGTTCTTCCATCTCCTTCTCT
TAAAGCCGAGCCTTCCAAAGTTACCAGTTCTGTAGGATCTTTTCCTGCCTCCCTCGTTCC
ATCAGCTGTGCCTCAGGCGCGCAAGGCATCATTGGCTCGATTCTTGGAGAAGCGCAAGGA
AAGGGTAATAAGTGCATCACCTTATCCTCTCAACAGCAAGCAATCCCCAGAATGTAGCAC
TCCTGAACTTGGAAGTAGAAGCCTCTCTATGAATTCTTCAGGCTCTTGTCCTCCCCACAT
AATCAGTTTGGTCAAGTAG