Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g118390.3.1
CDS Infomation

coiled-coil protein (AHRD V3.3 *** AT3G48860.2)
Sequence

ATGGATCGACGGAGGACGGAAAGTCCGGTGTACGCTCGGCAGTGGAGTGGAGGATCAAGT
AGTACAGGTTCATCGTCGCCGGCGGGATCGCCGGCTCATCCCCGTGCTCGATTGCCTCCT
ACGGTAACAGGAATGTCTACTATAAAGAGGACTCAGAATGTGGCCGCCAAAGCTGCTGCT
CAGCGTTTGGCACAAGTTATGGCTTCTTCTCATAGGCCTGATGAAGAAGAAGATGATGAT
GATCTAGGGTTTCGGCCTCCTACAGCTGCTTTCTCTACTAATGACAATCGGAGTAATAGC
AATAGCAAGAACAGTGGTTTGACGGCTATTTCACTAGCCAAACCCAATAGATCTCCTTCC
CCCTCGTTAGGTCGAAATTTTATGGATCACACTCCTTCTGTTCGTTCATCGTCTACTGGA
AGACCCTCCTCGATGTCTGTTCGTACATCAGCAGCAGCAACAACAACTGGAGCAATACTG
CAACCAAGTAGGTCATCAGTGAGAACTCCAGTTACCATACCACCAATAGAACCTCCTAGT
AATCGCTTGAGAGAGAAAAGGTTCACACCAGAATTAGGCCGAATGGATTTGAAGGATTCT
GGAAATGATCATGAGACTTCTGCGCTTCGTGATGAGCTTGATATGCTTCAAGAAGAAAAT
GACATTATTTTAGATAAGCTACGTCGTACAGAAGAACAACGTGAAGAATCTGAAGCTAGG
GTTCGTTTGTTGGAGAAACAGGTTGCTTCTCTTGGAGAAGGACTATCACTTGAAGCTAAA
TTATTAACCAGGAAGCAAGAAGCACTTCGCCAGAGAGAGGCTGCTCTTAAAGCTGCACAA
CAAACTAAGGATGGAAGAGAAGACGAAATTACGATACTTCGTACTGAGATTGAAAACTTG
AAGGATGACACTGCAAATGCAATGGAACAGCTTCAGGAAGCTGAAGCTGAAGCCAAAGCT
CTTCGAACAATGACACAGAGAATGATTTTGACCCATGAAGAGATGGAGGAGGTGGTTCTA
AAGAGATGTTGGCTTTCTCGATACTGGGGCCTAGCTGTACAATATGGTATCTGTGCAGAT
ATAGCAGGGACGAAGCATGAACATTGGTCATCCTTTGCACCTCTTCCATTTGAAGTTGTG
ATTTCTGCTGGCCAGAAGGCCAGAGAGGAATCCTGGAATGGTGGCGATGATTCTGATCGG
AGCAAACGTGCCCGTGACATTAGTGACTTATCTGGAGAGGGAAATATTGAGAGTATGCTG
TCAGTTGAAATGGCTCTAAGAGAATTAGCTTCCCTCAAGGTAGAGGATGCTGTTATTCTT
GCATTGGCGCAGCATCGGCGCTCAAATGTAGTTCGGCAGTCCTCTGATCCTAAATCATCT
GTTGACCCCAAGTTGATGGATGCATATGAGTTGGGGCAAGAGGAGTCGGAAGATGTTCTT
TTTAAGGAGGCTTGGCTTACATACTTTTGGAGGAGAGCCAAAGTGCATTGTGTAGAAGAG
GATATTGCAGAAGAGAGACTTCAGGTCTGGATAGGCCGTAGTGGACAGACACCAACCACT
CATGATGCAGTTGATGTTGAAAGAGGTTTGATAGAATTGAGGAAGCTGGGGATAGAACAG
CAGCTGTGGGAGGCATCTCGTAAAGAGATTGACCACCAACCTAATAATGGAAAAATGAGT
AGTGATTCGGAGGCATCTCCATGA

Peptide Sequence

PEP ID

Solyc03g118390.3.1
PEP Infomation

coiled-coil protein (AHRD V3.3 *** AT3G48860.2)
Sequence

MDRRRTESPVYARQWSGGSSSTGSSSPAGSPAHPRARLPPTVTGMSTIKRTQNVAAKAAA
QRLAQVMASSHRPDEEEDDDDLGFRPPTAAFSTNDNRSNSNSKNSGLTAISLAKPNRSPS
PSLGRNFMDHTPSVRSSSTGRPSSMSVRTSAAATTTGAILQPSRSSVRTPVTIPPIEPPS
NRLREKRFTPELGRMDLKDSGNDHETSALRDELDMLQEENDIILDKLRRTEEQREESEAR
VRLLEKQVASLGEGLSLEAKLLTRKQEALRQREAALKAAQQTKDGREDEITILRTEIENL
KDDTANAMEQLQEAEAEAKALRTMTQRMILTHEEMEEVVLKRCWLSRYWGLAVQYGICAD
IAGTKHEHWSSFAPLPFEVVISAGQKAREESWNGGDDSDRSKRARDISDLSGEGNIESML
SVEMALRELASLKVEDAVILALAQHRRSNVVRQSSDPKSSVDPKLMDAYELGQEESEDVL
FKEAWLTYFWRRAKVHCVEEDIAEERLQVWIGRSGQTPTTHDAVDVERGLIELRKLGIEQ
QLWEASRKEIDHQPNNGKMSSDSEASP*

Transcript Sequence

Transcript ID

Solyc03g118390.3.1
Transcript Infomation

coiled-coil protein (AHRD V3.3 *** AT3G48860.2)
Sequence

ATTTGAAAATCTCGAACCGAATGCTATAACCCATCTACCGTTAATACATAGGGTCTTCGC
CGCTGAGATGAAAATAAAAAGGTACATATAGTATAGCTCAAGGTCCATTTGACGGTAACT
GAAATCCGAGCTAGCTATTTTTTCGAACGGTCAATTTTTTTCCGTTTCTATCGTCTCTCC
CGCGATACGCGTTTCATTTTCTATTTATTGTACTTTTTCCGACTCAAGTTTGACGCCGTC
TTTTAATCCGTCAAATCTCTTTCTCTTCTTTCTCCCGATCTTCCATCGGAGAGAAAATCT
AGGTCCTAACGATTTCTAATGGAAATCTAGAAACTTCTCAAAATTCACGTACAGTTCCGA
CGGAGTAGATGGATCGACGGAGGACGGAAAGTCCGGTGTACGCTCGGCAGTGGAGTGGAG
GATCAAGTAGTACAGGTTCATCGTCGCCGGCGGGATCGCCGGCTCATCCCCGTGCTCGAT
TGCCTCCTACGGTAACAGGAATGTCTACTATAAAGAGGACTCAGAATGTGGCCGCCAAAG
CTGCTGCTCAGCGTTTGGCACAAGTTATGGCTTCTTCTCATAGGCCTGATGAAGAAGAAG
ATGATGATGATCTAGGGTTTCGGCCTCCTACAGCTGCTTTCTCTACTAATGACAATCGGA
GTAATAGCAATAGCAAGAACAGTGGTTTGACGGCTATTTCACTAGCCAAACCCAATAGAT
CTCCTTCCCCCTCGTTAGGTCGAAATTTTATGGATCACACTCCTTCTGTTCGTTCATCGT
CTACTGGAAGACCCTCCTCGATGTCTGTTCGTACATCAGCAGCAGCAACAACAACTGGAG
CAATACTGCAACCAAGTAGGTCATCAGTGAGAACTCCAGTTACCATACCACCAATAGAAC
CTCCTAGTAATCGCTTGAGAGAGAAAAGGTTCACACCAGAATTAGGCCGAATGGATTTGA
AGGATTCTGGAAATGATCATGAGACTTCTGCGCTTCGTGATGAGCTTGATATGCTTCAAG
AAGAAAATGACATTATTTTAGATAAGCTACGTCGTACAGAAGAACAACGTGAAGAATCTG
AAGCTAGGGTTCGTTTGTTGGAGAAACAGGTTGCTTCTCTTGGAGAAGGACTATCACTTG
AAGCTAAATTATTAACCAGGAAGCAAGAAGCACTTCGCCAGAGAGAGGCTGCTCTTAAAG
CTGCACAACAAACTAAGGATGGAAGAGAAGACGAAATTACGATACTTCGTACTGAGATTG
AAAACTTGAAGGATGACACTGCAAATGCAATGGAACAGCTTCAGGAAGCTGAAGCTGAAG
CCAAAGCTCTTCGAACAATGACACAGAGAATGATTTTGACCCATGAAGAGATGGAGGAGG
TGGTTCTAAAGAGATGTTGGCTTTCTCGATACTGGGGCCTAGCTGTACAATATGGTATCT
GTGCAGATATAGCAGGGACGAAGCATGAACATTGGTCATCCTTTGCACCTCTTCCATTTG
AAGTTGTGATTTCTGCTGGCCAGAAGGCCAGAGAGGAATCCTGGAATGGTGGCGATGATT
CTGATCGGAGCAAACGTGCCCGTGACATTAGTGACTTATCTGGAGAGGGAAATATTGAGA
GTATGCTGTCAGTTGAAATGGCTCTAAGAGAATTAGCTTCCCTCAAGGTAGAGGATGCTG
TTATTCTTGCATTGGCGCAGCATCGGCGCTCAAATGTAGTTCGGCAGTCCTCTGATCCTA
AATCATCTGTTGACCCCAAGTTGATGGATGCATATGAGTTGGGGCAAGAGGAGTCGGAAG
ATGTTCTTTTTAAGGAGGCTTGGCTTACATACTTTTGGAGGAGAGCCAAAGTGCATTGTG
TAGAAGAGGATATTGCAGAAGAGAGACTTCAGGTCTGGATAGGCCGTAGTGGACAGACAC
CAACCACTCATGATGCAGTTGATGTTGAAAGAGGTTTGATAGAATTGAGGAAGCTGGGGA
TAGAACAGCAGCTGTGGGAGGCATCTCGTAAAGAGATTGACCACCAACCTAATAATGGAA
AAATGAGTAGTGATTCGGAGGCATCTCCATGATGTACTTGTTTGATGTCTATTCTTTTAC
GGATTGTATTCTTCCCTTTTCCTTTTTCCTTTTGGGTTTACGATTCAGATAGATATTCTT
TCTTCTTCATCTTCTTCTTCTGATTTATTTCTTCCAGTCTGTTTTTCTGGAATTTTGAAA
TGGTAGAGCTTGAGAACAGGTAACTTGTAATTAGTAGCTGTTTGTATAATCAATTTGAGT
GATGCAAAAGTGATAATAGTCTGTGTCAATGTTATCTTTTGTTGAATTACATTATTCTCT
TTTGTTGAATTACATTATTTCTATTAGTAAAACACAGGACATGGTAGAGACCCCCGCAGA
AGGAAGAGTGCAAGTGGAAGTGGG