Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc03g118340.3.1
CDS Infomation	Chloroplast ATP-dependent Clp protease chaperone protein (AHRD V3.3 *** A0A088FCE7_NICBE)
Sequence	ATGATGGCTAGAGCTTTAGTTCAGTCAACAAACATTCTACCTTCAGTTGCTGGTGAAAGG GCTGGACAATTCAATGGATCCCGGAAAGATCAAAGAACTGTTAGAATGCTATGTAATGTA AAATGTTGTTCCTCAAGGCTGAACAATTTTGCAGGACTGCGAGGGTGCAATGCATTAGAT ACACTACTAGTAAAATCTGGAGAAACTCTCCATTCGAAAGTGGCAGCTGCAACTTTTGTC AGACGGCCACGAGGGTGCCGATTTGTCCCAAAAGCAATGTTTGAGCGGTTCACCGAGAAA GCAATAAAAGTCATTATGCTTGCCCAAGAAGAGGCCAGACGACTAGGTCACAACTTTGTT GGGACAGAACAGATCCTGCTGGGTCTTATTGGTGAGGGAACTGGTATTGCTGCTAAGGTT CTTAAATCCATGGGAATTAATTTGAAAGATGCTCGTGTGGAAGTAGAGAAGATCATTGGC AGGGGTAGTGGATTTATTGCAGTGGAAATCCCTTTTACTCCTCGTGCAAAGCGTGTTCTA GAACTATCTCTGGAGGAAGCCCGCCAACTAGGGCATAATTACATTGGCTCCGAACACTTG TTACTTGGATTGTTGCGCGAAGGTGAAGGTGTGGCTGCCCGTGTTCTTGAAAACTTGGGT GCTGACCCCACTAACATTCGCACACAGGTCATACGGATGGTTGGCGAGAGTAGTGAGGCT GTTGGTGCTAGTGTTGGAGGTGGAACTTCTGGCCTAAAGATGCCTACATTGGAGGAGTAC GGCACCAATTTGACAAAGTTAGCTGAAGAGGGGAAACTAGATCCTGTAGTTGGAAGACAG GCTCAAATCGAGCGTGTTACTCAAATCTTGGGTCGCCGTACAAAAAACAACCCTTGCCTT ATTGGAGAACCAGGTGTTGGAAAAACTGCTATTGCCGAAGGGCTAGCTCAAAGAATTGCT AATGGTGATGTCCCTGAAACAATAGAAGGAAAGAAGGTCATAACACTTGATATGGGATTG CTTGTTGCTGGGACAAAATACCGTGGAGAGTTTGAGGAAAGACTGAAGAAACTAATGGAG GAAATTAAACAAAGTGATGAAATAATACTGTTTATTGATGAAGTACACACATTGATTGGA GCTGGAGCTGCAGAGGGAGCAATTGATGCTGCAAACATCTTGAAACCTGCCCTGGCTAGA GGCGAGCTACAGTGTATTGGAGCCACAACCCTGGATGAGTACAGAAAGCACATTGAGAAA GACCCTGCACTAGAGAGAAGGTTCCAGCCAGTTAAAGTCCCTGAACCTTCTGTGGATGAA ACCATACAGATCTTGAAAGGGCTTCGGGAGAGGTATGAGATTCATCACAAGCTCCATTAC ACTGATGAGGCAATAGAGGCCGCTGCCAAGCTTTCTCACCAGTACATCAGTGACCGCTTT CTGCCTGATAAAGCAATTGACTTGATTGATGAAGCTGGTTCCCGTGTTCGACTTCGTCAT GCACAGCTCCCTGAGGAAGCAAGAGAGCTGGAAAAGGAGCTTCGCCAGATTACAAAGGAG AAAAATGAATCTGTCCGCGGTCAAGATTTTGAGAAGGCTGGGGAGTTGCGTGATAGAGAA ATGGATCTTAAGGCACAAATCTCAGCCTTGATAGACAAAAACAAAGAGAAGAGCAAGGCA GAATCTGAGGCAGGAGATGCAGCAGGTCCCATAGTGACAGAGGCAGATATTCAGCACATT GTCTCTTCCTGGACCGGCATTCCTGTAGAGAAGGTCTCAACTGATGAATCTGATCGCCTC CTAAAAATGGAAGAAACACTTCATACCCGAGTCATTGGCCAGGATGAAGCAGTAAAAGCC ATTAGTCGTGCTATCAGACGTGCCCGTGTTGGCCTCAAGAATCCCAACCGACCTATTGCC AGTTTCATCTTTTCTGGTCCAACTGGTGTTGGGAAGTCAGAACTGGCCAAGTCTTTAGCA ACGTACTACTTTGGTTCTGAAGAAGCAATGATTCGGCTTGATATGAGTGAGTTTATGGAA AGACACACTGTGTCTAAACTCATCGGTTCACCCCCTGGGTATGTTGGTTACACTGAAGGT GGTCAATTAACTGAAGCTGTGAGGCGTCGACCTTACACTGTTGTGCTCTTTGACGAGATT GAGAAGGCTCATCCTGATGTCTTTAACATGATGCTTCAAATTCTTGAAGATGGAAGATTG ACAGACAGCAAAGGCAGAACTGTCGACTTCAAGAATACACTCCTCATCATGACATCGAAT GTTGGAAGCAGTGTGATAGAGAAAGGAGGTCGTCGTATAGGTTTTGATCTAGATTTTGAC GAGAAGGATAGTAGTTACAACCGTATCAAGAGCTTGGTGACTGAGGAGTTGAAACAGTAC TTCAGGCCAGAGTTTTTAAACAGATTAGATGAGATGATTGTATTCCGTCAGCTCACTAAG TTGGAGGTGAAGGAGATTGCCGATATCATGCTTAAGGAGGTCTTTGTGAGGTTGAAGAAT AAGGAGATAGAACTCCAAGTGACAGAGAGGTTTAGAGATAGGGTAGTTGATGAAGGATAT AACCCAAGCTATGGAGCTAGGCCATTGAGGAGAGCTATTATGAGACTGCTAGAGGATAGT ATGGCCGAGAAGATGCTTGCAGGTGAGATCAAAGAAGGTGATTCAGTAATTGTGGATGTG GATTCAGATGGCAACGTCACCGTCCTCAATGGCACTAGTGGTGCTCCCTCAGATTCAGCT CCTGAGCCTATCCTTGTGTAG

Peptide Sequence

PEP ID	Solyc03g118340.3.1
PEP Infomation	Chloroplast ATP-dependent Clp protease chaperone protein (AHRD V3.3 *** A0A088FCE7_NICBE)
Sequence	MMARALVQSTNILPSVAGERAGQFNGSRKDQRTVRMLCNVKCCSSRLNNFAGLRGCNALD TLLVKSGETLHSKVAAATFVRRPRGCRFVPKAMFERFTEKAIKVIMLAQEEARRLGHNFV GTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFIAVEIPFTPRAKRVL ELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPTNIRTQVIRMVGESSEA VGASVGGGTSGLKMPTLEEYGTNLTKLAEEGKLDPVVGRQAQIERVTQILGRRTKNNPCL IGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME EIKQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEK DPALERRFQPVKVPEPSVDETIQILKGLRERYEIHHKLHYTDEAIEAAAKLSHQYISDRF LPDKAIDLIDEAGSRVRLRHAQLPEEARELEKELRQITKEKNESVRGQDFEKAGELRDRE MDLKAQISALIDKNKEKSKAESEAGDAAGPIVTEADIQHIVSSWTGIPVEKVSTDESDRL LKMEETLHTRVIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKSLA TYYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEI EKAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDFD EKDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADIMLKEVFVRLKN KEIELQVTERFRDRVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAGEIKEGDSVIVDV DSDGNVTVLNGTSGAPSDSAPEPILV*

Transcript Sequence

Transcript ID	Solyc03g118340.3.1
Transcript Infomation	Chloroplast ATP-dependent Clp protease chaperone protein (AHRD V3.3 *** A0A088FCE7_NICBE)
Sequence	GTTTATATTTATATATGACAATTATATCTATCCACCTACTTTCTCTATATAGCTATCACA CGGCCGACTTTCAAGCTCTCTCTATTTCTTTTCTCTTTCTTTTTTCTCCTCTTTCCACCA TCTTTAGTGTTATTGAGGTTGCAGGTCCATGATGGCTAGAGCTTTAGTTCAGTCAACAAA CATTCTACCTTCAGTTGCTGGTGAAAGGGCTGGACAATTCAATGGATCCCGGAAAGATCA AAGAACTGTTAGAATGCTATGTAATGTAAAATGTTGTTCCTCAAGGCTGAACAATTTTGC AGGACTGCGAGGGTGCAATGCATTAGATACACTACTAGTAAAATCTGGAGAAACTCTCCA TTCGAAAGTGGCAGCTGCAACTTTTGTCAGACGGCCACGAGGGTGCCGATTTGTCCCAAA AGCAATGTTTGAGCGGTTCACCGAGAAAGCAATAAAAGTCATTATGCTTGCCCAAGAAGA GGCCAGACGACTAGGTCACAACTTTGTTGGGACAGAACAGATCCTGCTGGGTCTTATTGG TGAGGGAACTGGTATTGCTGCTAAGGTTCTTAAATCCATGGGAATTAATTTGAAAGATGC TCGTGTGGAAGTAGAGAAGATCATTGGCAGGGGTAGTGGATTTATTGCAGTGGAAATCCC TTTTACTCCTCGTGCAAAGCGTGTTCTAGAACTATCTCTGGAGGAAGCCCGCCAACTAGG GCATAATTACATTGGCTCCGAACACTTGTTACTTGGATTGTTGCGCGAAGGTGAAGGTGT GGCTGCCCGTGTTCTTGAAAACTTGGGTGCTGACCCCACTAACATTCGCACACAGGTCAT ACGGATGGTTGGCGAGAGTAGTGAGGCTGTTGGTGCTAGTGTTGGAGGTGGAACTTCTGG CCTAAAGATGCCTACATTGGAGGAGTACGGCACCAATTTGACAAAGTTAGCTGAAGAGGG GAAACTAGATCCTGTAGTTGGAAGACAGGCTCAAATCGAGCGTGTTACTCAAATCTTGGG TCGCCGTACAAAAAACAACCCTTGCCTTATTGGAGAACCAGGTGTTGGAAAAACTGCTAT TGCCGAAGGGCTAGCTCAAAGAATTGCTAATGGTGATGTCCCTGAAACAATAGAAGGAAA GAAGGTCATAACACTTGATATGGGATTGCTTGTTGCTGGGACAAAATACCGTGGAGAGTT TGAGGAAAGACTGAAGAAACTAATGGAGGAAATTAAACAAAGTGATGAAATAATACTGTT TATTGATGAAGTACACACATTGATTGGAGCTGGAGCTGCAGAGGGAGCAATTGATGCTGC AAACATCTTGAAACCTGCCCTGGCTAGAGGCGAGCTACAGTGTATTGGAGCCACAACCCT GGATGAGTACAGAAAGCACATTGAGAAAGACCCTGCACTAGAGAGAAGGTTCCAGCCAGT TAAAGTCCCTGAACCTTCTGTGGATGAAACCATACAGATCTTGAAAGGGCTTCGGGAGAG GTATGAGATTCATCACAAGCTCCATTACACTGATGAGGCAATAGAGGCCGCTGCCAAGCT TTCTCACCAGTACATCAGTGACCGCTTTCTGCCTGATAAAGCAATTGACTTGATTGATGA AGCTGGTTCCCGTGTTCGACTTCGTCATGCACAGCTCCCTGAGGAAGCAAGAGAGCTGGA AAAGGAGCTTCGCCAGATTACAAAGGAGAAAAATGAATCTGTCCGCGGTCAAGATTTTGA GAAGGCTGGGGAGTTGCGTGATAGAGAAATGGATCTTAAGGCACAAATCTCAGCCTTGAT AGACAAAAACAAAGAGAAGAGCAAGGCAGAATCTGAGGCAGGAGATGCAGCAGGTCCCAT AGTGACAGAGGCAGATATTCAGCACATTGTCTCTTCCTGGACCGGCATTCCTGTAGAGAA GGTCTCAACTGATGAATCTGATCGCCTCCTAAAAATGGAAGAAACACTTCATACCCGAGT CATTGGCCAGGATGAAGCAGTAAAAGCCATTAGTCGTGCTATCAGACGTGCCCGTGTTGG CCTCAAGAATCCCAACCGACCTATTGCCAGTTTCATCTTTTCTGGTCCAACTGGTGTTGG GAAGTCAGAACTGGCCAAGTCTTTAGCAACGTACTACTTTGGTTCTGAAGAAGCAATGAT TCGGCTTGATATGAGTGAGTTTATGGAAAGACACACTGTGTCTAAACTCATCGGTTCACC CCCTGGGTATGTTGGTTACACTGAAGGTGGTCAATTAACTGAAGCTGTGAGGCGTCGACC TTACACTGTTGTGCTCTTTGACGAGATTGAGAAGGCTCATCCTGATGTCTTTAACATGAT GCTTCAAATTCTTGAAGATGGAAGATTGACAGACAGCAAAGGCAGAACTGTCGACTTCAA GAATACACTCCTCATCATGACATCGAATGTTGGAAGCAGTGTGATAGAGAAAGGAGGTCG TCGTATAGGTTTTGATCTAGATTTTGACGAGAAGGATAGTAGTTACAACCGTATCAAGAG CTTGGTGACTGAGGAGTTGAAACAGTACTTCAGGCCAGAGTTTTTAAACAGATTAGATGA GATGATTGTATTCCGTCAGCTCACTAAGTTGGAGGTGAAGGAGATTGCCGATATCATGCT TAAGGAGGTCTTTGTGAGGTTGAAGAATAAGGAGATAGAACTCCAAGTGACAGAGAGGTT TAGAGATAGGGTAGTTGATGAAGGATATAACCCAAGCTATGGAGCTAGGCCATTGAGGAG AGCTATTATGAGACTGCTAGAGGATAGTATGGCCGAGAAGATGCTTGCAGGTGAGATCAA AGAAGGTGATTCAGTAATTGTGGATGTGGATTCAGATGGCAACGTCACCGTCCTCAATGG CACTAGTGGTGCTCCCTCAGATTCAGCTCCTGAGCCTATCCTTGTGTAGATCAATTCTTC ATTTAGCTCTACAAATTTGTTCTTCGTAATGTTGCTTTTGGATGTCTTGGCTAAGCAACA TGTGAGTAATTTTTTGGGTGACAGGCTGATATATTCTTCCAAGTTGACTAGGCAATCTCC TTCTCAAGGATAGCATTCAGGAATACACACTATATACTTAATTGGGTTTCATTAAAATTC TGTCAAAGGGATATGTAAAAGCATTTCTTCTAATTTTTGGTAGGTGATAGTTAGACTTTT TATCATCATTTTCAGTACGTTTTTCTTCTAATTTTTGGTAGGTGATGGTCAGACATTGTC ATCATTTTCAGCATGTTTTTTCTGCTGTCTTGTTAATTTGGTTCATACCATAACTGAAGT ATTTTGGTTATGAACATTTTGAGTTCTTGTCCACAACAAACACTAGACAAATGTACTTCC AAATTTCGAATTTGAATGAATTTTGTCAGCCATAA