Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc03g118280.1.1
CDS Infomation	Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9RA74_RICCO)
Sequence	ATGAATCTCGTATTATCAAAAAGGATATTGACTATATACAATTGGAGTTGTCGAAGACAT GTAATCAAGAAATCAATGCGCTATTCCCACAGTAAATCAACACCTGAAGAAATCTCGACG ATTCTGAAAGATAAGATTTCGGTAAGTAAATCAACAGCGGAAGAAATATCGACGATTCTG AAGCTTAAGAACTGGAAATTACTCTTGGAGTCGTCAGAAATCCCTAAAAAGCTAAATGCA GATGTGGTTCAGTTCGTTCTTGATGGGAACAAATTGCTTGTCAACCCTAAACGTTTGCTT GACTTCTTTGACTGGTCGAATCAGAAAGTGGGTATGGCTCACATTGATTCTTTCTCCATT CTTGCATTGGCTTTGTGTAATTCGAACAATTTTTCACCTGCCCAGCATGTGTTTGATGAA ATGATTCAGAGACGATTTTCAGTAAGGGATATTGCTAGCTCGTTGGTTAAATGTTATAGG GAATGTGATAAGTTTAGCTCACAGACTGTGGCGTTTGAGTTGCCAATTGATGCTTGTAGG AAAAAGGGTATGCTAAATGAAGCTGTTTCTATGTTCTTGGGTATTAAAAATGAAGGTTTT TTCCCGAGTTTGTTGTGTTGTAATACGTTGTTGAATGAATTACTAAATGGTAATAAAATG GAACTGTTTTGGAAGGTTTATGAGGGAATGCTGGAGAGCAAGATGAGTCTTGATGTTTAT ACATACACCAATGTGATCAATGCTTATTGCAAGGTTGGCAATGTTAAGGATGCTAAAAGA CTTCTTCATGACATGGGAGAAAAGGGGTGCAATCCAAATTTGGTTACATACAATGTGGTT ATCAAAGGCTTGTGTGGGACAGGTACAGTTGATGAAGCTTTGAAGCTAAAGAGCTTGATG GAAGGAAAGGGATTGGTTCCGGATATCTATACCTACAGCACACTCATTGATGGCTTCTGT AAGAAAAAGAAGTCCAGGGAGGCAAAACGGATTTTGGATGAAATGTATGAAGTAGGTCTG AACCCGGATCATTTTGCATATACTGCGTTAATTGATGGATTCATGAAGGAGGGTGAGGTG GACGAGGCATTTAGAATAAAGGATGAAATGGTTGAACGTGGGAAGAGTTTGAATCTAATG ACCTACAATTCTATCATAAACGGGCTATGCAAAATTGGCCAGATTGAAAGAGCAGTAACT ATCAAGGCTGACATGATTGAAATGGGCATATCCCCTGATGTGCAAACATACAATTATTTA ATTGAGGGCTATGGTCGCAAGAATAACATGGATAAGGCTTCTGAACTTTTGGTTGAGATG ACCGACAGAAACTTGGTACCTTCAGCCTATACTTATGGTGTGCTGATTAATGCTTTCTGC AACGCTGGAGATCTCTGTCAAGCGATTCTTATTTTGGAGAAGATGATTGCAGCTGGCGTG AGACGAAATGCTATCATCTACACCCCCATCATAAAAGGTTATGTAGAGGATGGTAAATTT GAAGAAGCAAAACATATTTTGCAGGATATGTGGCAGGATGGTATATTACCTGATATCTTC TGTTATAATTCAATTGTTAGTGGGCTCTGCAAGGTGGGAAGGATAGATGAAGCAAAAGCG TGTCTCGTTGAAATAGATAAGAGAAGACTGAGACCGAATTCATTTACTTTTGGGCCTTTT ATTTCTTGGTATAGAGAGGCGGGGAATATGCAAGTTGCAGAACAGTATTTCTGGGAGATG ATAGATCGTGGTATAGCGCCTAATTATGTCACCTTTGCGTGTATCATTGATGGATACTGC AAATATGGGAATATATCACAGGCATTTTCAGTATTGAATCACATGCTTGAAATAGGTCGA CTGCCAAATGTTCAGCTTTATGGTATTCTTATCAATGCCCTCTCAAAGAATGGGAAATTG TCAGATGCCATGGATGTTTTATCTGAACTTTATAATAAGGGTCTAGTTCCTGATGTGTTC ACTTACACCTCACTAATTTCTGGCTTCTGTAAGCAGGGTAATTTGGAGAAGGCTTTTCTA CTTCTTGATGAAATGAGTCAGAAAGGCGTTAGACCAAACATCGTCACTTATAATAGCTTA ATAGGTGGTCTTTGCAAGTCAGGTGACCTATCGAGAGCTAGGGAAGTGTTTGATGGTATC TCTGGAAAGGGTTTAGCACCAAATAGTGTGACATATACTACAATCATTGATGGTTACTGC AAAGCTGGTGATCTAGATGAGGCATTTTGCCTTTCAGATGAAATGCCTTTACGGGGCGTT CAACCGGATGCCTTTGTATACAATGCTCTTCTTCACGGATGCTGCAAGGCAGGAGAGATA GAGAAGGCATTGTCATTATTCCATGAAATGGTAGAGAAGGGAATTGCATCTACTCTTACT CTCAATACATTGATTGATGGATTTTGCAAGTTAGGTAGATTGAGTGAAGCACTGGAGTTA GTGAAGGGCATGTCTGATATGCACATCCTGCCTGATCATGTAACTTACACCATTTTAATT GACTACTGTTGCAAGAACGAAATGATGAAAGTAGCAGACGAGCTTTTCCAAACGATGCAA GGGAGGAAACTGATACCAACCATCGTGACTTACACTTCACTCATACAAGGCTATCACAGA ATTGGAGAAAAATTGAAGGTGTTTTCACTATTTGAGGAAATGGTGGCAAGGGGTATTAAG CCTGATGAAGTAGTCTACAGCTCGATGGTTGATGCACTTTACCGAGAAGGAAATCTACAT AAAGCTTTCAGTCTTTGGAATGAACTTTTGGATAAAGGTCTTTTGAAAGGACATGTAAGT GAAACATTAGTGGGGTCTTGGTGTGAGAAGGGAGAAATTTCGGCATTGTTGGCATCACTC AATGAAATAGGAGCGCAAGGTTTTGTACCTAGTCTTGCTATGTGCAGTACTTTAGCCCAC GGATTAAATCAAGCAGGATATTCTGAAATATTACCTATGTTTGTGGAGACCATGGTAAAG TTTTCCTGGATCTCCAATTCCATGACTTCAAATGACTTAATCAGACATTGTCAGATAGAT GAACATACTGAAAGTATTAGCAACACTCCGAAGCAATCTGCCTTATAA

Peptide Sequence

PEP ID	Solyc03g118280.1.1
PEP Infomation	Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9RA74_RICCO)
Sequence	MNLVLSKRILTIYNWSCRRHVIKKSMRYSHSKSTPEEISTILKDKISVSKSTAEEISTIL KLKNWKLLLESSEIPKKLNADVVQFVLDGNKLLVNPKRLLDFFDWSNQKVGMAHIDSFSI LALALCNSNNFSPAQHVFDEMIQRRFSVRDIASSLVKCYRECDKFSSQTVAFELPIDACR KKGMLNEAVSMFLGIKNEGFFPSLLCCNTLLNELLNGNKMELFWKVYEGMLESKMSLDVY TYTNVINAYCKVGNVKDAKRLLHDMGEKGCNPNLVTYNVVIKGLCGTGTVDEALKLKSLM EGKGLVPDIYTYSTLIDGFCKKKKSREAKRILDEMYEVGLNPDHFAYTALIDGFMKEGEV DEAFRIKDEMVERGKSLNLMTYNSIINGLCKIGQIERAVTIKADMIEMGISPDVQTYNYL IEGYGRKNNMDKASELLVEMTDRNLVPSAYTYGVLINAFCNAGDLCQAILILEKMIAAGV RRNAIIYTPIIKGYVEDGKFEEAKHILQDMWQDGILPDIFCYNSIVSGLCKVGRIDEAKA CLVEIDKRRLRPNSFTFGPFISWYREAGNMQVAEQYFWEMIDRGIAPNYVTFACIIDGYC KYGNISQAFSVLNHMLEIGRLPNVQLYGILINALSKNGKLSDAMDVLSELYNKGLVPDVF TYTSLISGFCKQGNLEKAFLLLDEMSQKGVRPNIVTYNSLIGGLCKSGDLSRAREVFDGI SGKGLAPNSVTYTTIIDGYCKAGDLDEAFCLSDEMPLRGVQPDAFVYNALLHGCCKAGEI EKALSLFHEMVEKGIASTLTLNTLIDGFCKLGRLSEALELVKGMSDMHILPDHVTYTILI DYCCKNEMMKVADELFQTMQGRKLIPTIVTYTSLIQGYHRIGEKLKVFSLFEEMVARGIK PDEVVYSSMVDALYREGNLHKAFSLWNELLDKGLLKGHVSETLVGSWCEKGEISALLASL NEIGAQGFVPSLAMCSTLAHGLNQAGYSEILPMFVETMVKFSWISNSMTSNDLIRHCQID EHTESISNTPKQSAL*

Transcript Sequence

Transcript ID	Solyc03g118280.1.1
Transcript Infomation	Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9RA74_RICCO)
Sequence	ATGAATCTCGTATTATCAAAAAGGATATTGACTATATACAATTGGAGTTGTCGAAGACAT GTAATCAAGAAATCAATGCGCTATTCCCACAGTAAATCAACACCTGAAGAAATCTCGACG ATTCTGAAAGATAAGATTTCGGTAAGTAAATCAACAGCGGAAGAAATATCGACGATTCTG AAGCTTAAGAACTGGAAATTACTCTTGGAGTCGTCAGAAATCCCTAAAAAGCTAAATGCA GATGTGGTTCAGTTCGTTCTTGATGGGAACAAATTGCTTGTCAACCCTAAACGTTTGCTT GACTTCTTTGACTGGTCGAATCAGAAAGTGGGTATGGCTCACATTGATTCTTTCTCCATT CTTGCATTGGCTTTGTGTAATTCGAACAATTTTTCACCTGCCCAGCATGTGTTTGATGAA ATGATTCAGAGACGATTTTCAGTAAGGGATATTGCTAGCTCGTTGGTTAAATGTTATAGG GAATGTGATAAGTTTAGCTCACAGACTGTGGCGTTTGAGTTGCCAATTGATGCTTGTAGG AAAAAGGGTATGCTAAATGAAGCTGTTTCTATGTTCTTGGGTATTAAAAATGAAGGTTTT TTCCCGAGTTTGTTGTGTTGTAATACGTTGTTGAATGAATTACTAAATGGTAATAAAATG GAACTGTTTTGGAAGGTTTATGAGGGAATGCTGGAGAGCAAGATGAGTCTTGATGTTTAT ACATACACCAATGTGATCAATGCTTATTGCAAGGTTGGCAATGTTAAGGATGCTAAAAGA CTTCTTCATGACATGGGAGAAAAGGGGTGCAATCCAAATTTGGTTACATACAATGTGGTT ATCAAAGGCTTGTGTGGGACAGGTACAGTTGATGAAGCTTTGAAGCTAAAGAGCTTGATG GAAGGAAAGGGATTGGTTCCGGATATCTATACCTACAGCACACTCATTGATGGCTTCTGT AAGAAAAAGAAGTCCAGGGAGGCAAAACGGATTTTGGATGAAATGTATGAAGTAGGTCTG AACCCGGATCATTTTGCATATACTGCGTTAATTGATGGATTCATGAAGGAGGGTGAGGTG GACGAGGCATTTAGAATAAAGGATGAAATGGTTGAACGTGGGAAGAGTTTGAATCTAATG ACCTACAATTCTATCATAAACGGGCTATGCAAAATTGGCCAGATTGAAAGAGCAGTAACT ATCAAGGCTGACATGATTGAAATGGGCATATCCCCTGATGTGCAAACATACAATTATTTA ATTGAGGGCTATGGTCGCAAGAATAACATGGATAAGGCTTCTGAACTTTTGGTTGAGATG ACCGACAGAAACTTGGTACCTTCAGCCTATACTTATGGTGTGCTGATTAATGCTTTCTGC AACGCTGGAGATCTCTGTCAAGCGATTCTTATTTTGGAGAAGATGATTGCAGCTGGCGTG AGACGAAATGCTATCATCTACACCCCCATCATAAAAGGTTATGTAGAGGATGGTAAATTT GAAGAAGCAAAACATATTTTGCAGGATATGTGGCAGGATGGTATATTACCTGATATCTTC TGTTATAATTCAATTGTTAGTGGGCTCTGCAAGGTGGGAAGGATAGATGAAGCAAAAGCG TGTCTCGTTGAAATAGATAAGAGAAGACTGAGACCGAATTCATTTACTTTTGGGCCTTTT ATTTCTTGGTATAGAGAGGCGGGGAATATGCAAGTTGCAGAACAGTATTTCTGGGAGATG ATAGATCGTGGTATAGCGCCTAATTATGTCACCTTTGCGTGTATCATTGATGGATACTGC AAATATGGGAATATATCACAGGCATTTTCAGTATTGAATCACATGCTTGAAATAGGTCGA CTGCCAAATGTTCAGCTTTATGGTATTCTTATCAATGCCCTCTCAAAGAATGGGAAATTG TCAGATGCCATGGATGTTTTATCTGAACTTTATAATAAGGGTCTAGTTCCTGATGTGTTC ACTTACACCTCACTAATTTCTGGCTTCTGTAAGCAGGGTAATTTGGAGAAGGCTTTTCTA CTTCTTGATGAAATGAGTCAGAAAGGCGTTAGACCAAACATCGTCACTTATAATAGCTTA ATAGGTGGTCTTTGCAAGTCAGGTGACCTATCGAGAGCTAGGGAAGTGTTTGATGGTATC TCTGGAAAGGGTTTAGCACCAAATAGTGTGACATATACTACAATCATTGATGGTTACTGC AAAGCTGGTGATCTAGATGAGGCATTTTGCCTTTCAGATGAAATGCCTTTACGGGGCGTT CAACCGGATGCCTTTGTATACAATGCTCTTCTTCACGGATGCTGCAAGGCAGGAGAGATA GAGAAGGCATTGTCATTATTCCATGAAATGGTAGAGAAGGGAATTGCATCTACTCTTACT CTCAATACATTGATTGATGGATTTTGCAAGTTAGGTAGATTGAGTGAAGCACTGGAGTTA GTGAAGGGCATGTCTGATATGCACATCCTGCCTGATCATGTAACTTACACCATTTTAATT GACTACTGTTGCAAGAACGAAATGATGAAAGTAGCAGACGAGCTTTTCCAAACGATGCAA GGGAGGAAACTGATACCAACCATCGTGACTTACACTTCACTCATACAAGGCTATCACAGA ATTGGAGAAAAATTGAAGGTGTTTTCACTATTTGAGGAAATGGTGGCAAGGGGTATTAAG CCTGATGAAGTAGTCTACAGCTCGATGGTTGATGCACTTTACCGAGAAGGAAATCTACAT AAAGCTTTCAGTCTTTGGAATGAACTTTTGGATAAAGGTCTTTTGAAAGGACATGTAAGT GAAACATTAGTGGGGTCTTGGTGTGAGAAGGGAGAAATTTCGGCATTGTTGGCATCACTC AATGAAATAGGAGCGCAAGGTTTTGTACCTAGTCTTGCTATGTGCAGTACTTTAGCCCAC GGATTAAATCAAGCAGGATATTCTGAAATATTACCTATGTTTGTGGAGACCATGGTAAAG TTTTCCTGGATCTCCAATTCCATGACTTCAAATGACTTAATCAGACATTGTCAGATAGAT GAACATACTGAAAGTATTAGCAACACTCCGAAGCAATCTGCCTTATAA