Plant GARDEN
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TOP > About the Species(Solanum lycopersicum ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Solanum lycopersicum

CDS Sequence

CDS ID

Solyc03g118040.3.1
CDS Infomation

calnexin
Sequence

ATGGAAGAAACTAGAAGGAAGATCTGGGCGCAATATGCGTTCCTGTTATTGGCTTGTTGC
TTTTTCTCTCAACTCTACGCTACTTCAGATGTGAAGTTCTACGAGTCATTTGACGAAGCA
TTTGATGGGCGATGGATCGTATCTGAGAAAGAGGACTATTCAGGTGTGTGGAAACATGCC
AAGAGTGAGGGACATGATGATTATGGACTTCTTGTTAGTGAGAAGGCTAGGAAATACGCT
ATTGTCAAGGAGCTTGACAATGTTGTTGACCTCAAAGATGGAACTGTGGTTCTTCAATAT
GAGGTTCGCCTCCAGGATGGACTTGAATGTGGTGGTGCTTACATAAAATACCTCCGCCCC
CAGGAAGCAGGGTGGACCGCAAAGGGTTTTGATAACGAGTCCCCCTACACAATAATGTTT
GGACCTGATAAATGCGGAGCCACAAACAAGGTGCACTTCATTTTGAAACACAAGAACCCT
AAGAGTGGAGAATACGTTGAGCACCACCTCAAGTTTCCTCCCTCTGTACCAGCTGACAAG
CTAACTCATGTTTACACTGCTGTGTTGAAACCGGACAATGATGTTCTTATCTTGGTTGAC
GGAGAAGAAAAGAAGAAGGCTAACTTCCTCTCATCTGATGATTTTGAGCCACCACTTATT
CCTGCTGTGACCATTCCAGACCCAGAAGACAAGAAGCCGGAGGACTGGGATGAGAGAGCC
AAGATTCCAGACCCAGATGCTAAGAAACCTGATGATTGGGATGAGGATGCACCAATGGAA
ATTGAAGATGAGGAAGCTGTAAAGCCCGAAGGATGGTTGGATGATGAGCCTGAGGATGTT
GATGATCCTGAGGCTACCAAGCCTGAAGATTGGGATGATGAGGAGGATGGTGAATGGGAG
GCTCCGAAGGTTGACAACCCAAAATGTGCAGAAGCTCCTGGTTGTGGGGAGTGGAAAAGA
CCAATGATCAGAAATCCAGTATACAAGGGAAAATGGCACGCTCCGCTTATTGACAACCCC
AATTACAAGGGTATTTGGAAGCCAAGAGATATCCCAAATCCTGACTATTTTGAACTTGAC
AAACCCAACTTTGAGCCTATCGCAGCCATTGGCATTGAGATCTGGACAATGCAAGATGGC
ATATTGTTTGACAATATCTTGATTGCTAGTGATGAAGAAGTTGCAGAATCATACAGGAAG
ACTGCCTGGAAACCCAAGTTTGATGTAGAAAAGGAGAAACAGAAAGCTGAGGAAGAAGCA
GAATCTGGTGGCCTCAAAGGATACCAGAAATTAGTATTTGACCTCCTCTACAAGGTAGCT
GGTATCCCATTCTTGGGTGAACACAAGACCAAAGTATTGGATCTTCTCGAGAAAGCTGAG
AAACAGCCCAATATCACAGTTGGTGTCGTTGTCTCAATTGTAGTGGTTGTCTTCTCAGTT
CTATTGAAGCTCATTTTCGGTGGGAAGAAGCAGCAACCTGCTAGAGCTAGTGCCGAGACT
GAGAAAACTGACGGAGCTGAAACCTCGACTTCCAATAGTCAAGCCGCTGAGGAGAAGGAA
GAGCAGAGTGAGGATGCTGGTGCTGCTCCTCGTCGAAGGACTAGGCGCGACAATTAG

Peptide Sequence

PEP ID

Solyc03g118040.3.1
PEP Infomation

calnexin
Sequence

MEETRRKIWAQYAFLLLACCFFSQLYATSDVKFYESFDEAFDGRWIVSEKEDYSGVWKHA
KSEGHDDYGLLVSEKARKYAIVKELDNVVDLKDGTVVLQYEVRLQDGLECGGAYIKYLRP
QEAGWTAKGFDNESPYTIMFGPDKCGATNKVHFILKHKNPKSGEYVEHHLKFPPSVPADK
LTHVYTAVLKPDNDVLILVDGEEKKKANFLSSDDFEPPLIPAVTIPDPEDKKPEDWDERA
KIPDPDAKKPDDWDEDAPMEIEDEEAVKPEGWLDDEPEDVDDPEATKPEDWDDEEDGEWE
APKVDNPKCAEAPGCGEWKRPMIRNPVYKGKWHAPLIDNPNYKGIWKPRDIPNPDYFELD
KPNFEPIAAIGIEIWTMQDGILFDNILIASDEEVAESYRKTAWKPKFDVEKEKQKAEEEA
ESGGLKGYQKLVFDLLYKVAGIPFLGEHKTKVLDLLEKAEKQPNITVGVVVSIVVVVFSV
LLKLIFGGKKQQPARASAETEKTDGAETSTSNSQAAEEKEEQSEDAGAAPRRRTRRDN*

Transcript Sequence

Transcript ID

Solyc03g118040.3.1
Transcript Infomation

calnexin
Sequence

AAGCACTCTTGAATGTCTCGATTTTCGTACTTTTTAGTTTCTAGAGTGTTCTTTATTTTC
TCCTTGATCTATTCCTCCCTTAGTGGAAACACCGTTAGGGTTTTTCCAAATCCAGATCTC
TGATACAGTTTCGAATATTATCTTCTTCGCATAGTCCACAACGGGTTATGGAAGAAACTA
GAAGGAAGATCTGGGCGCAATATGCGTTCCTGTTATTGGCTTGTTGCTTTTTCTCTCAAC
TCTACGCTACTTCAGATGTGAAGTTCTACGAGTCATTTGACGAAGCATTTGATGGGCGAT
GGATCGTATCTGAGAAAGAGGACTATTCAGGTGTGTGGAAACATGCCAAGAGTGAGGGAC
ATGATGATTATGGACTTCTTGTTAGTGAGAAGGCTAGGAAATACGCTATTGTCAAGGAGC
TTGACAATGTTGTTGACCTCAAAGATGGAACTGTGGTTCTTCAATATGAGGTTCGCCTCC
AGGATGGACTTGAATGTGGTGGTGCTTACATAAAATACCTCCGCCCCCAGGAAGCAGGGT
GGACCGCAAAGGGTTTTGATAACGAGTCCCCCTACACAATAATGTTTGGACCTGATAAAT
GCGGAGCCACAAACAAGGTGCACTTCATTTTGAAACACAAGAACCCTAAGAGTGGAGAAT
ACGTTGAGCACCACCTCAAGTTTCCTCCCTCTGTACCAGCTGACAAGCTAACTCATGTTT
ACACTGCTGTGTTGAAACCGGACAATGATGTTCTTATCTTGGTTGACGGAGAAGAAAAGA
AGAAGGCTAACTTCCTCTCATCTGATGATTTTGAGCCACCACTTATTCCTGCTGTGACCA
TTCCAGACCCAGAAGACAAGAAGCCGGAGGACTGGGATGAGAGAGCCAAGATTCCAGACC
CAGATGCTAAGAAACCTGATGATTGGGATGAGGATGCACCAATGGAAATTGAAGATGAGG
AAGCTGTAAAGCCCGAAGGATGGTTGGATGATGAGCCTGAGGATGTTGATGATCCTGAGG
CTACCAAGCCTGAAGATTGGGATGATGAGGAGGATGGTGAATGGGAGGCTCCGAAGGTTG
ACAACCCAAAATGTGCAGAAGCTCCTGGTTGTGGGGAGTGGAAAAGACCAATGATCAGAA
ATCCAGTATACAAGGGAAAATGGCACGCTCCGCTTATTGACAACCCCAATTACAAGGGTA
TTTGGAAGCCAAGAGATATCCCAAATCCTGACTATTTTGAACTTGACAAACCCAACTTTG
AGCCTATCGCAGCCATTGGCATTGAGATCTGGACAATGCAAGATGGCATATTGTTTGACA
ATATCTTGATTGCTAGTGATGAAGAAGTTGCAGAATCATACAGGAAGACTGCCTGGAAAC
CCAAGTTTGATGTAGAAAAGGAGAAACAGAAAGCTGAGGAAGAAGCAGAATCTGGTGGCC
TCAAAGGATACCAGAAATTAGTATTTGACCTCCTCTACAAGGTAGCTGGTATCCCATTCT
TGGGTGAACACAAGACCAAAGTATTGGATCTTCTCGAGAAAGCTGAGAAACAGCCCAATA
TCACAGTTGGTGTCGTTGTCTCAATTGTAGTGGTTGTCTTCTCAGTTCTATTGAAGCTCA
TTTTCGGTGGGAAGAAGCAGCAACCTGCTAGAGCTAGTGCCGAGACTGAGAAAACTGACG
GAGCTGAAACCTCGACTTCCAATAGTCAAGCCGCTGAGGAGAAGGAAGAGCAGAGTGAGG
ATGCTGGTGCTGCTCCTCGTCGAAGGACTAGGCGCGACAATTAGGATGGGGAAAGGTTCT
AGTGACCGCAGTCGGACTTATTTTAGATTTTTGATCTAGTAGTTGTTCCTGTTGTTTTGA
TATCTTTTTCCTCTTTTCTCAAATTCTTGATGATCAAGGCAAGCAAGTTTTTCCAGCGAT
GTTGCTTCCCCTCAAAACAAGCATGTATCACAGTATTGTATATGAGACAATTTTTATCTG
GATGTTATCCTCTTTTATATCATAGATTTTTAAAGAAGCGATTATTCTTGTTTGCTTTCT
TTTACCAAGGCCTATGATCCATCCTTTCATAATTCCATTAAAT