Gene sequences

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Trait-Related Loci

Solanum lycopersicum

CDS Sequence

CDS ID	Solyc03g117950.3.1
CDS Infomation	ATP-dependent Clp protease (AHRD V3.3 *** A0A059Q1P9_9POAL)
Sequence	ATGGAGTTATCGTGTTCTTCTCCGCTTTCTGTCAACTCTACTATCAGTTTCAATCGATAT GTTTCTGTGTACCCTCATAGGAGATGTCAAAGTGTTCTCTCCCTTTTTCCATATTATCCT TCTTCTTCTTCTCATGTTGCTACCACAGCTACTGCTTCTGCTCCTTGTAGTACTAGCAGT TCTAGTTCGACCCTTTTTGGGATTTCCCTTTCTCATCGACCCAGCAGTTCCGTTCATCGT AAAATCAAGCGTTCTATGTATATTGTGTCGGGGGTGTTCGAGAGATTTACTGAGAGATCG ATTAAAGCTGTGATGTTCTCCCAGAAGGAAGCAAAGGCTTTGGGTAAAGATATGGTGAGC ACCCAACACCTTTTACTTGGTCTTATCGCGGAGGATCGGAGTCCTGGTGGGTTTCTTGGT TCTCGAATAACTATTGATAAGGCCCGTGAAGCTGTTCGTAGCATATGGCTTGGTGACTCA GAGGACGATACAACAAAATTGGGTTCTCAGGACTCCAGTTCAGCTACCTCAGCTACTGAT GTGGCCTTTTCTTCAAGTACCAAGCGGGTTTTTGAGGCTGCGGTTGAGTATTCAAGGACC ATGGGGTATAATTATATTGCTCCTGAGCATATTGCTATTGGTTTGTTTACTGTTGATGAT GGCAGCGCTGGTCGTGTGCTCAAGAGGTTAGGAGCAAATGTAAATCGTCTGGCAGCTGAG GCAGTTTCCAGGCTTCAAGGAGAGCTTGCTAAAGATGGTAGAGACCCAATTTCGTTCAAA AGATCACGTGAGAAATCCTTTCCTGGAAAAATAACTATTGACAGATCTGCTGAGAAAGCA AAAGAGAAAAACGCTCTGGAGCAATTTTGTGTAGATCTTACTGCCCGTGCAAGTGAGGGC CTTATAGACCCAGTAATTGGTAGGGAGACTGAAGTTCAGAGAATGATCGAGATACTCTGC CGTCGAACCAAAAACAATCCTATTCTGCTTGGTCAAGCTGGAGTTGGGAAAACAGCGATA GCTGAAGGGCTTGCTATAAACATTGCTGAAGGAAATATTCCTGCGTTCTTAATGAAAAAA CGGGTAATGTCTTTAGACATTGGCCTATTGATTTCAGGTGCAAAGGAGAGGGGTGAACTA GAGGCGCGTGTGACTACATTAATTAAGGAGGTAAAAGAGTCAGGCCATATCATTCTATTC ATAGATGAGGTCCACACCCTTGTTGGTGCTGGCACAGTTGGACGGGGAAATAAGGGCTCT GGTCTTGACATTGCTAATTTGCTAAAACCAACACTTGGCCGTGGTGAACTGCAGTGTATT GCATCTACCACCATGGATGAGTTCAGATTGCATATTGAGAAAGACAAGGCCTTTGCTCGA AGGTTCCAGCCCATCTTGGTTAATGAACCAAGTCAGGCGGATGCTGTCCAGATACTATTG GGGTTGCGTGAAAAATATGAGTCGCATCATAAGTGTAGGTACAGTCTGGAAGCCATCAAT GCTGCTGTGGAACTATCATCAAGATATATACCGGATAGGTATCTTCCTGACAAAGCTATT GATCTTATTGATGAGGCTGGTAGTAAATCTCGTATGCAAGCTCACAAAAGAAGAAAGGAA CAGCAGATATCTGTACTTTCACAATCACCTAGTGATTATTGGCAGGAAATTAGAGCTGTT CAAACCATGCATGAAGTGATCCTGGCTAGCAAGCTGACTGAAAATGCTGATGCGTCTCGT TTGGATGATGACAGTGAACTTCATTTGCAGCCAGCTTCGTCTTCTACATCTGATCAACAT GAACTCCCATTAGTTGGACCTGAGGATATAGCAGCAGTTGCTTCACTCTGGACAGGCATT CCCCTTAAGCAGCTTACAGTTGATGAAAGAATGCTTTTGGTTGGTCTTGATGAGCAGCTT AAGAAAAGGGTTGTTGGTCAGGATGAGGCTGTTACATCTATTTGTCGGGCTGTTAAGAGA TCCAGAACTGGCCTCAAGCACCCAAATAGACCAATTTCGGCAATGCTCTTCTGTGGTCCT ACTGGAGTTGGAAAATCTGAACTGGCTAAAGCTTTGGCAGCATCTTATTTTGGATCTGAA TCTGCCATGCTAAGATTGGATATGAGTGAATACATGGAGCGGCATACTGTGAGCAAGTTA ATTGGATCGCCTCCTGGTTATGTAGGCTATGGAGAAGGAGGGACTCTAACTGAAGCTATC CGAAGAAAGCCCTTCACTGTAGTGCTGCTAGATGAGATTGAAAAGGCTCATCCCGACATA TTCAATATTCTCCTTCAGTTGTTTGAAGATGGTCACCTAACAGACTCTCAGGGAAGAAGA GTGTCATTTAAGAACGCCTTGATAGTTATGACTTCAAATGTGGGTTCAACAGCCATTGTA AAGGGTAGACAGAATACTATCGGCTTCTTGCTTGCTGAAGATGAGTCAGCCGCCTCCTAT GCTGGTATGAAAGCAATAGTGATGGAGGAGCTCAAAACATACTTTCGTCCAGAGTTACTG AATAGGATAGATGAAGTAGTGGTATTCCGTCCACTAGAGAAGCCTCAGATGCTCGAGATA TTAAACCTGATGTTGCAGGAGGTAAGAGCTAGGCTTGTTTCATTAGGAATAAGTTTGGAG GTATCAGAAGCAGTAATGGACCTCATATGCCAACAAGGATTTGACAGAAACTATGGCGCA CGCCCTCTGAGGAGGGCTGTTACTCAAATGGTTGAAGATCTCCTGTGTGAATCTGTACTT TCTGGGGATTTCAAGCCTGGTGATGTTGCTGTGATCCATTTAGATGAATCTGGAAATCCT GTCGTCGTTAACCAGTCAAGCCAGAGTATCCAATTGTCTGATACAAACGGAAATCCAGTA GTCACCAACAGGTGA

Peptide Sequence

PEP ID	Solyc03g117950.3.1
PEP Infomation	ATP-dependent Clp protease (AHRD V3.3 *** A0A059Q1P9_9POAL)
Sequence	MELSCSSPLSVNSTISFNRYVSVYPHRRCQSVLSLFPYYPSSSSHVATTATASAPCSTSS SSSTLFGISLSHRPSSSVHRKIKRSMYIVSGVFERFTERSIKAVMFSQKEAKALGKDMVS TQHLLLGLIAEDRSPGGFLGSRITIDKAREAVRSIWLGDSEDDTTKLGSQDSSSATSATD VAFSSSTKRVFEAAVEYSRTMGYNYIAPEHIAIGLFTVDDGSAGRVLKRLGANVNRLAAE AVSRLQGELAKDGRDPISFKRSREKSFPGKITIDRSAEKAKEKNALEQFCVDLTARASEG LIDPVIGRETEVQRMIEILCRRTKNNPILLGQAGVGKTAIAEGLAINIAEGNIPAFLMKK RVMSLDIGLLISGAKERGELEARVTTLIKEVKESGHIILFIDEVHTLVGAGTVGRGNKGS GLDIANLLKPTLGRGELQCIASTTMDEFRLHIEKDKAFARRFQPILVNEPSQADAVQILL GLREKYESHHKCRYSLEAINAAVELSSRYIPDRYLPDKAIDLIDEAGSKSRMQAHKRRKE QQISVLSQSPSDYWQEIRAVQTMHEVILASKLTENADASRLDDDSELHLQPASSSTSDQH ELPLVGPEDIAAVASLWTGIPLKQLTVDERMLLVGLDEQLKKRVVGQDEAVTSICRAVKR SRTGLKHPNRPISAMLFCGPTGVGKSELAKALAASYFGSESAMLRLDMSEYMERHTVSKL IGSPPGYVGYGEGGTLTEAIRRKPFTVVLLDEIEKAHPDIFNILLQLFEDGHLTDSQGRR VSFKNALIVMTSNVGSTAIVKGRQNTIGFLLAEDESAASYAGMKAIVMEELKTYFRPELL NRIDEVVVFRPLEKPQMLEILNLMLQEVRARLVSLGISLEVSEAVMDLICQQGFDRNYGA RPLRRAVTQMVEDLLCESVLSGDFKPGDVAVIHLDESGNPVVVNQSSQSIQLSDTNGNPV VTNR*

Transcript Sequence

Transcript ID	Solyc03g117950.3.1
Transcript Infomation	ATP-dependent Clp protease (AHRD V3.3 *** A0A059Q1P9_9POAL)
Sequence	GTTCTTCAATGGAGTTATCGTGTTCTTCTCCGCTTTCTGTCAACTCTACTATCAGTTTCA ATCGATATGTTTCTGTGTACCCTCATAGGAGATGTCAAAGTGTTCTCTCCCTTTTTCCAT ATTATCCTTCTTCTTCTTCTCATGTTGCTACCACAGCTACTGCTTCTGCTCCTTGTAGTA CTAGCAGTTCTAGTTCGACCCTTTTTGGGATTTCCCTTTCTCATCGACCCAGCAGTTCCG TTCATCGTAAAATCAAGCGTTCTATGTATATTGTGTCGGGGGTGTTCGAGAGATTTACTG AGAGATCGATTAAAGCTGTGATGTTCTCCCAGAAGGAAGCAAAGGCTTTGGGTAAAGATA TGGTGAGCACCCAACACCTTTTACTTGGTCTTATCGCGGAGGATCGGAGTCCTGGTGGGT TTCTTGGTTCTCGAATAACTATTGATAAGGCCCGTGAAGCTGTTCGTAGCATATGGCTTG GTGACTCAGAGGACGATACAACAAAATTGGGTTCTCAGGACTCCAGTTCAGCTACCTCAG CTACTGATGTGGCCTTTTCTTCAAGTACCAAGCGGGTTTTTGAGGCTGCGGTTGAGTATT CAAGGACCATGGGGTATAATTATATTGCTCCTGAGCATATTGCTATTGGTTTGTTTACTG TTGATGATGGCAGCGCTGGTCGTGTGCTCAAGAGGTTAGGAGCAAATGTAAATCGTCTGG CAGCTGAGGCAGTTTCCAGGCTTCAAGGAGAGCTTGCTAAAGATGGTAGAGACCCAATTT CGTTCAAAAGATCACGTGAGAAATCCTTTCCTGGAAAAATAACTATTGACAGATCTGCTG AGAAAGCAAAAGAGAAAAACGCTCTGGAGCAATTTTGTGTAGATCTTACTGCCCGTGCAA GTGAGGGCCTTATAGACCCAGTAATTGGTAGGGAGACTGAAGTTCAGAGAATGATCGAGA TACTCTGCCGTCGAACCAAAAACAATCCTATTCTGCTTGGTCAAGCTGGAGTTGGGAAAA CAGCGATAGCTGAAGGGCTTGCTATAAACATTGCTGAAGGAAATATTCCTGCGTTCTTAA TGAAAAAACGGGTAATGTCTTTAGACATTGGCCTATTGATTTCAGGTGCAAAGGAGAGGG GTGAACTAGAGGCGCGTGTGACTACATTAATTAAGGAGGTAAAAGAGTCAGGCCATATCA TTCTATTCATAGATGAGGTCCACACCCTTGTTGGTGCTGGCACAGTTGGACGGGGAAATA AGGGCTCTGGTCTTGACATTGCTAATTTGCTAAAACCAACACTTGGCCGTGGTGAACTGC AGTGTATTGCATCTACCACCATGGATGAGTTCAGATTGCATATTGAGAAAGACAAGGCCT TTGCTCGAAGGTTCCAGCCCATCTTGGTTAATGAACCAAGTCAGGCGGATGCTGTCCAGA TACTATTGGGGTTGCGTGAAAAATATGAGTCGCATCATAAGTGTAGGTACAGTCTGGAAG CCATCAATGCTGCTGTGGAACTATCATCAAGATATATACCGGATAGGTATCTTCCTGACA AAGCTATTGATCTTATTGATGAGGCTGGTAGTAAATCTCGTATGCAAGCTCACAAAAGAA GAAAGGAACAGCAGATATCTGTACTTTCACAATCACCTAGTGATTATTGGCAGGAAATTA GAGCTGTTCAAACCATGCATGAAGTGATCCTGGCTAGCAAGCTGACTGAAAATGCTGATG CGTCTCGTTTGGATGATGACAGTGAACTTCATTTGCAGCCAGCTTCGTCTTCTACATCTG ATCAACATGAACTCCCATTAGTTGGACCTGAGGATATAGCAGCAGTTGCTTCACTCTGGA CAGGCATTCCCCTTAAGCAGCTTACAGTTGATGAAAGAATGCTTTTGGTTGGTCTTGATG AGCAGCTTAAGAAAAGGGTTGTTGGTCAGGATGAGGCTGTTACATCTATTTGTCGGGCTG TTAAGAGATCCAGAACTGGCCTCAAGCACCCAAATAGACCAATTTCGGCAATGCTCTTCT GTGGTCCTACTGGAGTTGGAAAATCTGAACTGGCTAAAGCTTTGGCAGCATCTTATTTTG GATCTGAATCTGCCATGCTAAGATTGGATATGAGTGAATACATGGAGCGGCATACTGTGA GCAAGTTAATTGGATCGCCTCCTGGTTATGTAGGCTATGGAGAAGGAGGGACTCTAACTG AAGCTATCCGAAGAAAGCCCTTCACTGTAGTGCTGCTAGATGAGATTGAAAAGGCTCATC CCGACATATTCAATATTCTCCTTCAGTTGTTTGAAGATGGTCACCTAACAGACTCTCAGG GAAGAAGAGTGTCATTTAAGAACGCCTTGATAGTTATGACTTCAAATGTGGGTTCAACAG CCATTGTAAAGGGTAGACAGAATACTATCGGCTTCTTGCTTGCTGAAGATGAGTCAGCCG CCTCCTATGCTGGTATGAAAGCAATAGTGATGGAGGAGCTCAAAACATACTTTCGTCCAG AGTTACTGAATAGGATAGATGAAGTAGTGGTATTCCGTCCACTAGAGAAGCCTCAGATGC TCGAGATATTAAACCTGATGTTGCAGGAGGTAAGAGCTAGGCTTGTTTCATTAGGAATAA GTTTGGAGGTATCAGAAGCAGTAATGGACCTCATATGCCAACAAGGATTTGACAGAAACT ATGGCGCACGCCCTCTGAGGAGGGCTGTTACTCAAATGGTTGAAGATCTCCTGTGTGAAT CTGTACTTTCTGGGGATTTCAAGCCTGGTGATGTTGCTGTGATCCATTTAGATGAATCTG GAAATCCTGTCGTCGTTAACCAGTCAAGCCAGAGTATCCAATTGTCTGATACAAACGGAA ATCCAGTAGTCACCAACAGGTGAAGCCAGCATATCCATTTATCTGATACATCTGTACTGT ATTGTAAGGTAATAACAACACGATATAGCTCACTGTATATGAGTTAATTTTTTTGTATAG TTTTAGATATAGCCCATTCATACATGTAAAGACATGCCACAGAATTCTTTCAACAATGTA TAAACTCTTATGATCATTGTATAATATTGTTGATCATGTATTTAACCTACACAATCTTTT CTACTAAAAGATAGAGAAGCTAACCACGATTCACCTTATTTTGTCAAATCTATTTTAAGA AATACATTTGTTAATAATGTGAAATTGTGAACATGAAGTTTCAACCAAGATAGCTTTGGC TATC